KEGG   Cyclopterus lumpus (lumpfish): 117731092
Entry
117731092         CDS       T09199                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04145  Phagosome
clum04210  Apoptosis
clum04530  Tight junction
clum04540  Gap junction
clum04814  Motor proteins
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117731092
  09143 Cell growth and death
   04210 Apoptosis
    117731092
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117731092
   04540 Gap junction
    117731092
  09142 Cell motility
   04814 Motor proteins
    117731092
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117731092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117731092
   03036 Chromosome and associated proteins [BR:clum03036]
    117731092
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117731092
   04147 Exosome [BR:clum04147]
    117731092
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117731092
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117731092
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117731092
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117731092
  Exosomal proteins of other body fluids (saliva and urine)
   117731092
  Exosomal proteins of colorectal cancer cells
   117731092
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117731092
NCBI-ProteinID: XP_034389134
Ensembl: ENSCLMG00005019608
LinkDB
Position
5:complement(26388359..26391406)
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQKPNDKTIAGGDNSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRIGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEVIDLVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPSYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPVATYAPIISAERAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKSTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGLSSGDGDGEEEGEEF
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctccatccatgtgggtcaggccggtgtccagattggcaatgcatgc
tgggagctctactgcctggagcacggcatccagcccgatggacagaagcccaacgacaag
accatcgccgggggagacaactccttcaacaccttcttcagtgagaccggagctgggaag
cacgtccccagagctgtgtttgtggacctggagcccactgtcattgacgaggtgcgtatc
gggacctaccggcagctgttccaccccgagcagcttatcaccgggaaggaggatgcggcc
aacaactacgcccgcgggcactacaccgtcggcaaagaggtcatcgacctggtgctggac
cggatccgcaaactgtcagaccagtgcacgggtcttcaggggttcctggtcttccacagc
ttcgggggcggcaccggctctggcttcacctccctgctgctggagcgcctgtcggtcgac
tacggcaagaagtccaagctggagttcgccatctacccggccccccaggtgtccacggcg
gtggtggagccgtacaacgccatcttgaccacccacaccaccctggagcactccgactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgac
cgcccctcgtacaccaacctcaaccggctgatgagtcagatcgtctcctccatcaccgcc
tccctgcgcttcgacggggccctgaacgtggacctgacggagttccagaccaacctggtg
ccctacccccgcatccacttcccggtggccacctacgccccgatcatctccgccgagagg
gcctaccacgagcagctgaccgtggccgagatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgcgaccctcgccacggtaaatacatggcctgctgcctgctgtaccgc
ggcgacgtggtgcccaaagacgtcaacgccgccatcgccaccatcaaaaccaagagcacc
atccagtttgtggactggtgccccaccggcttcaaggtgggcatcaactaccagccgccc
accgtggtgcccggcggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgccgaggcctgggcccgactcgaccacaagttcgacctgatgtacgcc
aagcgggccttcgtccactggtacgtcggggaggggatggaggagggggagttctctgag
gccagagaggacatggccgccctggagaaggactacgaggaggtggggctcagttctggt
gacggtgacggtgaagaagagggggaggagttttag

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