Cyclopterus lumpus (lumpfish): 117731092
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Entry
117731092 CDS
T09199
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04210
Apoptosis
clum04530
Tight junction
clum04540
Gap junction
clum04814
Motor proteins
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117731092
09143 Cell growth and death
04210 Apoptosis
117731092
09144 Cellular community - eukaryotes
04530 Tight junction
117731092
04540 Gap junction
117731092
09142 Cell motility
04814 Motor proteins
117731092
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117731092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117731092
03036 Chromosome and associated proteins [BR:
clum03036
]
117731092
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117731092
04147 Exosome [BR:
clum04147
]
117731092
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117731092
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117731092
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117731092
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117731092
Exosomal proteins of other body fluids (saliva and urine)
117731092
Exosomal proteins of colorectal cancer cells
117731092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117731092
NCBI-ProteinID:
XP_034389134
Ensembl:
ENSCLMG00005019608
LinkDB
All DBs
Position
5:complement(26388359..26391406)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQKPNDKTIAGGDNSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRIGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEVIDLVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPSYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPVATYAPIISAERAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKSTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGLSSGDGDGEEEGEEF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgcatctccatccatgtgggtcaggccggtgtccagattggcaatgcatgc
tgggagctctactgcctggagcacggcatccagcccgatggacagaagcccaacgacaag
accatcgccgggggagacaactccttcaacaccttcttcagtgagaccggagctgggaag
cacgtccccagagctgtgtttgtggacctggagcccactgtcattgacgaggtgcgtatc
gggacctaccggcagctgttccaccccgagcagcttatcaccgggaaggaggatgcggcc
aacaactacgcccgcgggcactacaccgtcggcaaagaggtcatcgacctggtgctggac
cggatccgcaaactgtcagaccagtgcacgggtcttcaggggttcctggtcttccacagc
ttcgggggcggcaccggctctggcttcacctccctgctgctggagcgcctgtcggtcgac
tacggcaagaagtccaagctggagttcgccatctacccggccccccaggtgtccacggcg
gtggtggagccgtacaacgccatcttgaccacccacaccaccctggagcactccgactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgac
cgcccctcgtacaccaacctcaaccggctgatgagtcagatcgtctcctccatcaccgcc
tccctgcgcttcgacggggccctgaacgtggacctgacggagttccagaccaacctggtg
ccctacccccgcatccacttcccggtggccacctacgccccgatcatctccgccgagagg
gcctaccacgagcagctgaccgtggccgagatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgcgaccctcgccacggtaaatacatggcctgctgcctgctgtaccgc
ggcgacgtggtgcccaaagacgtcaacgccgccatcgccaccatcaaaaccaagagcacc
atccagtttgtggactggtgccccaccggcttcaaggtgggcatcaactaccagccgccc
accgtggtgcccggcggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgccgaggcctgggcccgactcgaccacaagttcgacctgatgtacgcc
aagcgggccttcgtccactggtacgtcggggaggggatggaggagggggagttctctgag
gccagagaggacatggccgccctggagaaggactacgaggaggtggggctcagttctggt
gacggtgacggtgaagaagagggggaggagttttag
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integrated database retrieval system