Cyclopterus lumpus (lumpfish): 117731185
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Entry
117731185 CDS
T09199
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117731185
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117731185
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
117731185
NCBI-ProteinID:
XP_034389254
Ensembl:
ENSCLMG00005009198
LinkDB
All DBs
Position
5:12694086..12697828
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AA seq
424 aa
AA seq
DB search
MERIPSAQPPPLSKHQADLSDLQGMDFPMYVYKPRRGMKRGEESKETYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLLEQQQQKILALQNGM
QIDQPAVNQEKSEEMFRSGFHICAKEMLQYLGNHETDGDFTPSHVINYLHKLAAEVLQSP
VRPCTPPTPQTEDPAYLQHQPHKEMPTSLPPKPSEGYGRNCVPVIQRAHAPMSSEQSGSD
TDTDSGYGGELEKTESGAQQGRPDYYGHGSHLKRALGERQSSNIKQEDEEPRHKRPRVES
SEDELLSGGESSSTSSSSSGYGSYMSNPTPPHPLCMPFYLIPPSAAAYLPMLEKCWYPGA
MPMLYPGMGVSAPTMHSERPHPPQLMVSPRGGSPAPAISQTPMDSPALLQALKQVPPLNQ
ETKD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcccaagcgcgcaaccacctcctctgtccaaacaccaggcggatctgtcg
gacttgcaggggatggatttcccgatgtatgtttataaacccaggcgaggaatgaagaga
ggagaggagagcaaggaaacctacaagctgcctcacagacttattgagaagaaaagacgt
gaccggataaacgagtgtatcgctcagctgaaagatttattaccagagcacctgaaactc
acgactctgggccatctggagaaggctgtagttttagagcttacactcaagcatgtgaaa
gccctcacctctcttctggagcagcagcagcagaagatcctcgctctgcagaatggcatg
caaattgatcagcctgctgtcaaccaggagaagtcagaggagatgtttcgctctggcttc
cacatttgtgccaaggagatgcttcagtatctaggcaatcatgaaactgatggagatttc
accccatcccatgtgatcaattaccttcacaagttagccgcagaggtgctgcaaagtcca
gtccgaccctgcactcctcccaccccgcaaacagaagaccctgcctacctccagcaccaa
cctcacaaggagatgcccaccagcttaccccctaaacccagcgagggctatgggaggaac
tgtgtgcccgtcatccagcgggcgcatgctccaatgagcagtgagcagagtggcagtgat
acagatacggacagcggctatggtggagagctggagaagactgaatctggggcgcaacag
ggacgtccagattactacggtcatgggagccatctgaagcgagcactcggcgagaggcag
agctccaatatcaaacaggaggatgaagagccgcgccacaaacgccctcgggtggagtcg
tcagaggacgagctgctctcaggaggagagtcatcatcaacatcatcgtcctctagcggt
tatggcagttacatgagcaatccaactcctccacatcccctctgcatgcctttctacctc
attccaccttctgctgcagcctacctgccaatgctggagaaatgctggtaccccggggcc
atgcccatgctataccctggcatgggagtctctgcacccaccatgcacagcgaaagaccg
catccacctcagctaatggtttctcccaggggaggctctccagccccagccatatctcag
acccccatggactcccctgccctccttcaggcattaaagcaggtaccacccctcaaccag
gaaaccaaagactga
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