KEGG   Cyclopterus lumpus (lumpfish): 117731200
Entry
117731200         CDS       T09199                                 
Symbol
itga7
Name
(RefSeq) integrin alpha-7 isoform X1
  KO
K06583  integrin alpha 7
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04512  ECM-receptor interaction
clum04810  Regulation of actin cytoskeleton
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117731200 (itga7)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117731200 (itga7)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117731200 (itga7)
   04810 Regulation of actin cytoskeleton
    117731200 (itga7)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117731200 (itga7)
   04515 Cell adhesion molecules [BR:clum04515]
    117731200 (itga7)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117731200 (itga7)
Cell adhesion molecules [BR:clum04515]
 Integrins
  Integrin alpha subunits
   117731200 (itga7)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3
Other DBs
NCBI-GeneID: 117731200
NCBI-ProteinID: XP_034389282
Ensembl: ENSCLMG00005005091
LinkDB
Position
5:18209966..18242438
AA seq 1123 aa
MAAPVGHGNTVSLSSCLHRWTSLLWALLTLSSQVSGFNLDITHTLHKLGDRGTFFGFSLA
LHQQLTPEPQSWILVGAPQAAGHGQLRGSRPGALFKCPITPEEYDCERVDIDGEVNLNKE
SKDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVNKPAETRDPIGRCYVLSEDLTERDDLD
GGEWKFCEGRPQGHEQFGFCQQGLSVSFSPDNNFILFGAPGTYNWKGEMRVQLLNQSLLD
LGFYDDGPYEVADQKQLNAQLIPVPSHSYLGFSVDSAMGIMSLGELTFVAGAPRANHTGA
VVLLRKDNVYRLVPQHIFWGEELASSFGYSVATVDLNKDGWTDLIVGAPNFFDRKAEIGG
AVYVYLNPFGHWDDQARPIRLNGTYDSMFGITVSNIGDLDQDGYGDIAVGAPFDGDGKVF
IYRGSDSGIETKPAQVLDGRDFDVRCFGYSISGGLDIDNNHYPDIAVGSLNDSVVLFRSR
PVIHVIRDVSIDPQFIDLEQYNCKGREGVCMEVKACFTFTAHPEHYSPHITLVVHFEADT
ERRKLGLPHRVNFLGRSSLEPEYTQIEEVELHRQRHPVCTTATFQLHENIRDKLRPISLA
ITHTIKSVPPRRHSGAKRLEKLAPVLSVSPSNTLHSEVNFLREGCGSDKICQSNLKLSYQ
FGTRPLTSDLFTPLPKDEDDVQVFSLSDQRLVVLEISVTNIPSDPLLPEEDGDDAHAAQL
LISLPNTLSYAGSRITQQMRCQANPNGSQVECDLGNPVKRGNKLTFSINFGTSNITIETT
ELTADLLLTTISEQPELPPVTAFAKVVIELPLSVSGFSRPHQLFFSGAVKGESAMTSLED
IGSPVDFEFVVANPGQALQMLGSAFLNIMWPYGLANEKWLLYPVSLKFEGHPDTQCTSTG
SLNTLKLHSSAEPPQPANHKAGRTRRSHPEEVGQVATKGSMGRTTPAVAASERRKSLKLD
CLLGSARCVLFQCPLHSFSGHAVLKIHARLWNSSFIEEFAAVSALELLVRANITVKSSIK
HLLLKDAAAQVPVMIYPEPGLTDQYRIPWWIILIAVLAGMLLLTLLVCILWKCGFFQRAH
YKDKLPQYHAVKIPREDRPQFHTEKSGVVHKKEWATHWSDGTS
NT seq 3372 nt   +upstreamnt  +downstreamnt
atggcagccccggtgggacatgggaacaccgtctccctctcatcttgcttgcatcgttgg
acttccctcctctgggctctgttgaccctttcaagccaagtgtcgggctttaatctggat
attactcacacactgcacaagttgggagaccgtggcaccttttttggtttctctctagca
ctccaccagcagcttacccccgagcctcagagctggatcctggtgggggcgccacaggca
gcagggcacggccaattgaggggcagccggccgggagccttgttcaagtgtccaatcaca
ccggaggagtacgactgtgagagggtggatattgatggagaagtgaatctgaacaaagag
agcaaagacaaccagtggctgggggtcactgtcaagagtcaggggattggagggaaggtg
gtgacctgcgctcacctgtatgagctcaggcaacgcgtgaacaaaccggcagagactcgc
gaccccatcggacgctgctacgtcctcagtgaggatctgacagagcgagacgacctggac
ggaggggagtggaagttctgcgagggccggccgcagggacacgagcagtttggcttctgt
cagcaggggctctctgtcagtttcagcccggataacaacttcatactgtttggtgctccg
ggaacttacaactggaaaggggagatgcgtgtccagctcctaaaccagtctctgcttgat
ctcggtttctatgacgacgggccctacgaggtggcagatcagaaacaacttaatgcccag
ctcatccctgtgccctcccacagttacctggggttttctgtggactcggccatggggatc
atgagcctcggggagctgaccttcgtggcgggtgcacctcgagccaatcacacgggggca
gtggtgctgctgaggaaggacaacgtctaccgactggtgccacagcacatcttctggggg
gaggagctggcgtcttcatttgggtactctgtagctacggtggatctaaacaaggacgga
tggacagatttgattgttggagctcctaatttctttgaccgtaaggcagagattggtgga
gcagtgtatgtgtacctaaaccccttcggtcactgggacgatcaggctcggcccatccgt
ctcaacgggacctacgactccatgtttggaataacagtcagcaatataggagatctggat
caggacggatacggggatattgctgtgggggcaccgtttgatggagatggcaaagtgttt
atctacagaggctcagattctggcattgaaacaaaaccggctcaggtgctggatggtcgt
gactttgatgtgagatgttttggatactctatctcaggcggtttggatatcgataataac
cactaccctgatattgcggtgggctctcttaatgactcagtggttctcttcaggtctcgg
ccagtcatccatgtgatcagagatgtatctatcgaccctcagtttattgatctggaacag
tacaactgcaagggcagagaaggagtctgcatggaggtcaaggcctgcttcaccttcacg
gcccacccagagcactactcaccacacattacactcgtggtgcactttgaagctgacaca
gagcgcaggaagttgggcctcccgcaccgcgttaacttcctgggccgcagttccttggag
ccggagtatactcagatagaagaagtggagctgcatcggcagcgtcaccctgtgtgcacc
actgctaccttccagctccatgagaacatccgtgacaaactgcgtccgatctcattggcg
ataacccacaccatcaagtctgtgccaccacgcagacactcaggtgccaagaggctggag
aagctggctccggtgctgagtgtttccccgtcaaacacgctgcactctgaggtgaacttc
cttcgagaaggatgcggcagcgacaaaatctgccagagcaacctgaagctgagctaccag
tttggaacgcgacccctgacctctgacctcttcacccctctgccaaaagatgaggatgat
gtgcaggtgttctccctgtcagaccagcggttggtggtgctggagatcagtgtcaccaac
ataccgtccgacccgctgctccctgaagaggacggcgatgacgcccacgctgctcagctg
ctcatctcccttccaaacactctgtcgtacgccggctccaggatcacacaacagatgaga
tgccaagcgaacccgaatggctctcaagttgaatgtgacctgggaaaccctgtgaagcga
ggtaataagctgacattctccatcaacttcggtacatctaacatcacaattgagaccact
gagttgactgcagatctcttattgacaaccatcagcgaacagcctgaactgccaccagtc
acggcttttgctaaagttgtgatagagctccctctgtctgtcagtggttttagccgtcct
caccagctgttcttcagcggggcagtgaagggagagagtgccatgaccagtctggaggac
atcggcagccctgtggattttgagtttgtggttgctaatcctggccaagctctgcaaatg
ctcggctcagccttcctcaacatcatgtggccttacggactggccaacgagaaatggctt
ctgtatcctgtcagcttgaagtttgagggccacccagacacacagtgcacctcaacaggg
tccttgaatactctgaagctccacagctctgcagaacctccacagcctgccaatcacaag
gctgggcgaacgcgccgttcccacccggaggaggtaggtcaagtggcgacaaaaggcagc
atgggacgaaccaccccagctgtggcagcttcagagagacgcaagtcgctcaaactggat
tgtctcttggggtcggcacgctgtgtcctctttcagtgccccctccacagcttctccggt
catgctgtcctcaagatccatgccaggctgtggaacagcagcttcatagaggagtttgca
gcagtcagtgccctggagctgctggtcagagccaacatcactgtgaagtccagcatcaaa
cacctgctcctcaaggatgctgctgctcaggtgccagtgatgatctatcccgagcctggt
cttactgaccagtacaggatcccctggtggatcatcctcatagccgtcctggcgggcatg
ctgctgctgactctgttggtctgcatactgtggaagtgtggcttcttccaacgggcccac
tacaaagacaaattgcctcagtaccacgcggtgaagattcctcgcgaggaccggccacag
ttccatactgagaagtcaggagttgtccataaaaaggaatgggccacgcactggagcgac
gggacctcgtaa

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