KEGG   Cyclopterus lumpus (lumpfish): 117731208
Entry
117731208         CDS       T09199                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117731208 (ubap2a)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117731208 (ubap2a)
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    117731208 (ubap2a)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117731208 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N
Other DBs
NCBI-GeneID: 117731208
NCBI-ProteinID: XP_034389291
Ensembl: ENSCLMG00005002893
LinkDB
Position
5:complement(678455..690378)
AA seq 1269 aa
MMSSLGGDKARGPREKALPAATQASQPQKQIQMQATAEQIRLAQVIYDKNDADFEGKVNQ
LMEVTGKNQDECMVALHDCNEDISRAINFLLESTSDMTSWETVGKKKPLVKEGPSDSKEN
KENREKKGEREASKGRAAASRRGRGASRSRPARPEENGVEVTPVDRGSDRGRRARGGGRG
SGARGRGRGPPGSRFSAQGMGYGGSTHSTFNPADYASEGGSGSTHTEVWDPAATSNTDGS
VTWRGTLEDWASEDWSEDVGLSETKVFTSSCAAENHITPGQSLDLGSLLQKPAVGGREPP
SSSSSQSLVFTNSHHHHHQQQQQQQQQQQQQQQQPPPSRNATSSTSYAHAALSSVLGAGF
GDLGQAKRAPPSAGAQILEQLKGPGLGPLPSSQAAAPASTQGSNASICRLPGLGAPAPPP
SSSSWDIKASDSNASSLSSQFSREFGLQPEPSLVLSQLVQRHSGPSLPLARQPSPPSQQL
APAASASPAPHHTSTPSQAGPGMSAAGAKPPAPGAGLDPQGGSTPQQQQRAQLKGQKRRI
PPSSKIPATAVEMPGSADVPGLNLQFGALDFGSESPLPEFGVVDNCAMAASRESTPAPAP
GPGTQNQTSLYSKPLSESLGSPLSVALPLSSSEPVYHSSGPLPSLTPSLGTASSSNPPLC
SSTASTTSSSHFSTVGGSYDGTMPPHTRLAFSQSKEATGPVMNGLNGVRTSAALDTSPKP
ESPSPNISTNGGAAPSSHLASSLPAHGSTGLSSLAQDLPSAGQLTSLNSHVNHSSVSALG
SSSSSLTYTSVDNSNVSSLAPSSGSYTSSQHLALHSTHNSSNSSSGISHLGNMGNMGNMG
NMGNHMSSTVGGIVSASVLHSAAIAAGTALGLGSNGANATSNLSAARTTALLSSSTGKAP
PNLSQGVPPLLPNQYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTA
TLSGRDGSLATNPYSGEVTKFGRNDATSPAPPTSLAAPQASQGQSPGQNQAQPQPPQAQP
QPQGQPQHHSSQQAFLPAGYSYTGLPYYTGVPGGVPSAAAFQYGHTMFVPPGGPGPASAK
QHSMGLGLGNPSASPFQQQQTQQQQPSGYGQHAFSSGYEELTAGPAGVDYSKGYNSSSQA
QAKSAASGPGKGVSVTSSNSGVPDISGSVYNKTQSFDKQGFHAGTPPPFSLPSALGGPGP
LNPGGAPGGYAPAPFLHILPHQQPHSQLLHHHLAQDGQGGPSQRGQNSSLQQKSQVNKSS
YGSSPYWAN
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcggcgacaaggcccggggccctcgagagaaagctctgcctgct
gccactcaagcatcacaaccacagaaacagatacagatgcaggctactgccgagcagatc
cggctcgcccaggtcatctacgacaagaatgatgctgactttgagggcaaagttaaccag
ctgatggaagtgaccgggaagaaccaggatgagtgcatggtagcactccacgactgcaac
gaggacattagcagagccattaacttcctcctcgagagcacctcggacatgacctcatgg
gagacggtcgggaagaagaagcctctggtgaaggagggtccctcagacagcaaggagaac
aaggagaaccgggagaagaaaggagagagggaagctagcaagggccgcgcagcagctagc
cgccggggccggggggccagtcgcagtcgaccggcgcgtccagaggagaacggagtggag
gtcacaccggtggacagaggttcggaccgaggtcggagggccagaggtggcggccgagga
tctggagctcgaggccgagggagaggaccaccagggagccggttctccgcccagggcatg
gggtacgggggcagcacacacagcaccttcaacccagcggactacgcctccgaggggggg
tccgggtccacacacaccgaggtgtgggacccggcagccaccagcaacacagatgggtca
gttacctggaggggaaccttggaagactgggcgtctgaggactggagtgaggatgttggt
ctctcagagaccaaagtgttcacctcctcatgtgctgctgagaatcacatcacacctggg
caaagtctggacctcggctctctgctgcagaagcctgcagttggaggaagagagccacct
tcgtcctcttcctctcagagtctggtcttcactaactcccaccaccaccaccaccagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagccgccccccagccgcaac
gccaccagtagcaccagctacgctcatgctgctctgtcgtcggttctgggagctggtttt
ggggacctggggcaggccaagagggctccgcctagtgctggagctcagatactggagcag
ctgaagggccctggcttgggtccgcttccttcctcccaggctgcagctcctgccagcacc
caaggaagcaacgcttccatttgccgcctgcccggcctgggagcacctgcacctcctccc
tcctcatcgagctgggacataaaggcttcggattccaacgcctcctcgctgtcctcgcag
ttcagccgtgagttcggcctgcagccagagccgtctctggtgctgagccagctggttcag
aggcacagcggcccctccttgcctctggcacgccaaccgagccctccgtcgcagcaacta
gcgcctgctgcttcagcctcgcccgctccccaccacaccagcacgccatcacaggcgggc
ccggggatgagcgctgctggtgctaaacctcctgcccccggcgcagggctggaccctcag
ggtggcagcaccccacagcagcagcaacgggcccagctcaaaggacagaaacgaaggata
cctccctcatcgaagatccccgccacggcggtagagatgcccggctcggccgacgtcccc
gggctgaacctccagtttggagctcttgacttcggctcggagtcgccgttgccggagttc
ggagtcgttgacaattgtgcgatggcggcatccagggagtccacaccggcccctgcaccg
ggaccagggacccagaaccagacgagcttgtactccaaaccactcagcgagtcgctgggc
agccctctctccgtggcgctgcctctctcctcctcagagccggtgtatcactcctctggg
ccgttgcccagcctcactccctcattagggactgccagctcctccaacccccccttgtgt
tcttcgacagcctccaccacctcctcctctcacttctccacagtggggggtagttacgat
gggaccatgccccctcacacacgactggccttctcccagagtaaagaggccacgggacca
gtcatgaatggtctgaatggtgtcaggacctctgctgctctagacacttcaccgaagcca
gagtctccgtctccgaacatcagcaccaacggtggcgccgccccctcctcccacttagca
tccagcctgcctgcacacggctccaccgggctctccagcctggcacaggacctgccctca
gccggccagctgacctcgctcaacagtcatgtcaatcattcctcggtgtcggctctgggc
tccagctctagctctctcacctacaccagtgttgacaacagcaacgtgagctctctggct
ccctcctctggctcctacacgtcatcgcagcacttggcactccactcgacccacaacagc
agcaacagtagcagcggcatcagccacctgggcaacatgggcaacatgggcaacatgggc
aacatgggcaaccacatgagcagcacggtcggcggcatcgtcagcgccagcgtgcttcac
tcggccgccatcgccgccggcacggcgctgggactcggctccaatggagccaacgccacg
tcgaacctctctgcagcgaggaccacggctctgctctcgtcctccactggtaaagctcct
cctaatttatcccagggagtgccccctctactgcccaaccagtatatcatgggcccaggg
gggctgctgccagcatacccacagatctatggttatgaagacctccatatgctccagtcc
agactgccaatgccctctttgcaggattactatgggatcacattccccggccccacagcg
actctctctggtagagacgggagcctggccaccaacccctactcaggagaagtcacaaag
tttggcaggaatgacgccacctccccggcaccccccacaagccttgcggccccgcaggcc
tcccagggccagagcccaggacagaaccaggcccagcctcagcccccccaggcccagcct
cagccccagggccagccgcaacaccacagcagtcagcaggcctttctgcccgcgggctac
agctacacgggcctgccttactacaccggggtgcccgggggcgtccccagcgctgctgcc
ttccagtacggccacaccatgtttgttccccccgggggtccgggaccggcctcggccaag
cagcacagtatgggcctcggtctggggaacccctcggcgagccccttccagcagcagcag
acgcagcagcagcagcccagcggctacggccagcacgccttcagctcagggtacgaggag
ctgaccgcggggccagcaggagtggactacagcaaaggatacaactcctcctcacaggca
caagccaaatctgctgcttctgggcccgggaaaggggtctccgtgacgtccagtaactcc
ggcgtgcccgacatcagtggaagtgtttacaacaagacccagtcttttgataagcagggt
ttccatgcgggcacacctcctcccttcagtctgccatcagcactggggggtccgggccct
ctgaaccctggaggagctcctggaggctacgccccggcccccttcctccacatcctgcct
caccagcaaccgcactcgcagctgctgcaccaccacctggctcaggacggacaggggggt
ccgagccaacggggccagaacagcagcctgcagcagaagagccaagtcaacaagtcgagc
tacggcagctccccctactgggccaactga

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