Cyclopterus lumpus (lumpfish): 117731241
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Entry
117731241 CDS
T09199
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a
KO
K06757
neurofascin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117731241 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117731241 (nfasca)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
L1 family
117731241 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
BiPBP_C
Pur_ac_phosph_N
DUF3792
Motif
Other DBs
NCBI-GeneID:
117731241
NCBI-ProteinID:
XP_034389350
Ensembl:
ENSCLMG00005005368
LinkDB
All DBs
Position
5:complement(9280390..9362722)
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AA seq
1172 aa
AA seq
DB search
MLGRGGHVALALMSLVLLLWREAAPIEVPQDPKILQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ATNDLGVALSNKILLRVSKAPLWPKEVLEPVVVTEGTPLVLACNPPPGLPPPFTFWMNSA
MTPIPQDKRVSMGLNGDLYFSNVLIKDAHTDYCCNARFLFTHTIQQKNPFTLKVLTSRKV
AESTPTFLSPSGTESSKMVLRDEQLLLECIAAGLPTPTIKWFKKGGDLPGRKVKFDNYNK
TLKIINVSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDKPSNLVLAPEENGRLVCR
ANGNPKPIIEWLINGQPIESTPHSPSRQVLGDTILFRSVQMGSSAVYQCNASNQHGYLLA
NAFVSVLDMLPRMLGPKNQLIKVIVNNRTFLDCPFFGSPLPDLRWFKNGQGSGLDGGHYR
VYINGTLEIKRARAEDEGTYTCVANSMLGKAENQVRLEVKEPTRIVRVPEHRSAVRGSLA
HFDCKVKSDPSLPITVAWSKDDKPLSLGWRLRKDGESLLITNVNEGDEGTYTCTVKSEID
QDSASARLTVLEEASLNPSSALPPDRPDAPVELDLSDPTARSVRLTWIPENDHRSPVTEF
LVQFEENRWEPGRWQNLSTYPGDLNSVILQLAPYANYQFRIIAINAVGQSQPSRPSPRYL
SNGAAPDAIPRGLRGWGSKKDNMEITWEPLLNLERNGPNLHYSVWWRRNDLGEGWSNVTT
VESKHVIHNTETYMPYEIKVQARNEFGQGPESNVVVGYSGEDKPTDAPTDLQVSKVDSTK
ANLHWKPVDLSSVQGEFKEYRLYYWRESSLVPGLVVSKEKKTKGFYSIVAEPSGILSDLV
PFSKYKMFLVVANNRFEGPPSNTVDITTKEGVPDAPKFFRINRRTFDTIHLEWDKPLEPN
GILIGYQLKYQTVNGSRVGRPQLETLPPNVTTFTLRMPDRSTRYKFYLSALTQVGSGEVY
AEESPHFANEAYIDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDL
PLDPVDQKDQDGSFDYHSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSF
IGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcgggggggccacgtggccctggctctcatgtcattagtgctattactgtgg
cgtgaagcagcacccattgaagtaccacaagacccaaagatcctgcaagacctgaagcag
ccccccaccatagtcaagcagtcagtgaaggactacattgtcgaccccagagataacatc
atcatcgagtgtgaggccaagggcaacccagtaccaacgttctcatggcgaagaaacggg
aagtttttcaacatcgggaaagatcccagggtgacaatgcgaaaacgctcgggaactctg
gagatcggtttccgtagtggaggacgaccagaggactatgaaggggagtaccagtgtttt
gccaccaatgacctcggagtggctctgtccaacaaaatcctgctcagggtctccaaggct
cctctgtggcctaaagaggtgctggagccggtagtggtgactgaaggcaccccgctggtg
ctagcctgcaaccccccaccaggcctgcctcctccgttcaccttttggatgaacagcgcg
atgactccgatccctcaggataagagggtgtccatgggcctgaacggagacctgtacttc
tccaacgtcttgatcaaagacgctcacaccgactactgctgcaatgctcgcttcctcttc
acacacaccattcaacagaagaaccccttcacactcaaagtcctgacgagccgcaaagta
gccgagtccacgccaaccttcctctctccctcggggaccgagagctccaagatggtgcta
cgggacgagcaactgctgctggagtgtatcgctgctggacttccgacacccaccatcaag
tggtttaagaagggtggggacctgccaggcagaaaggtgaagtttgacaactacaacaag
accctgaagatcatcaacgtgtcagaggaggatgctggggagtacgtttgcatggccaac
aaccatttaggcagcatacgccactccatctttgtccaggtcaaagcggctccttattgg
ctcgacaaaccctccaacctggtgctcgctccggaggagaacggccggctggtgtgtcgg
gccaacggcaaccccaaaccgatcatcgagtggctgatcaacggacagcctatagagagc
actccccacagccccagcagacaggtgcttggtgataccatcctcttccgctcggtgcag
atgggaagcagtgctgtctaccaatgcaacgcctccaaccagcacggctacctgctggcc
aacgccttcgtcagtgtcctcgacatgcttccgaggatgctgggccctaaaaaccagctg
atcaaagtcattgtgaacaaccgcaccttcctagactgtcctttcttcgggtctcctctg
ccggacctacgctggtttaagaacggacagggcagtgggctggacggaggtcattaccgc
gtttacatcaacggcaccctggagatcaaacgggcccgagcagaggacgagggcacctac
acctgtgtggccaacagcatgctgggcaaggcagagaaccaggtccgcctagaggtcaaa
gagccgactcgtattgttcgagtcccggagcaccggtcggccgtcaggggctccctggct
cacttcgactgtaaggtgaagtctgatcccagcctgcccatcaccgtggcctggtccaag
gatgacaagcctctctctctgggctggaggctgaggaaagatggggagtcgctgctcatc
accaatgtgaacgagggggacgagggaacctacacctgcactgttaaatctgagatagac
caggactcagcctcagcccgcctcacggtgttagaggaagcctccctcaacccctctagt
gccttgccgccagaccgcccagacgctccagtggaactagatctgtcagaccccacagcc
cgcagcgttcgcctcacctggatccccgaaaacgaccaccggagcccagtcacagaattc
ttggtccagttcgaggagaaccgctgggagccgggcaggtggcagaacctatccacatac
ccaggagacctcaactctgtcatcctgcagctcgccccctacgccaactaccagttcagg
atcatcgccatcaacgcagtgggccagagtcagcccagccggccctcgccacggtacctg
tccaacggagctgccccagatgccatccccagaggtctacgaggatggggatccaagaag
gacaatatggagatcacctgggagcctctgcttaatctggagaggaacgggccaaacctg
cactacagcgtgtggtggagacggaacgatttgggagaagggtggagtaacgtgaccacg
gtggagtccaaacatgtcatccacaacacagagacctacatgccttacgagatcaaagtc
caggccagaaatgagtttggacagggacctgagtctaatgtggttgttggatactctgga
gaagacaagcccaccgacgctcccactgacctgcaggtgtcaaaggttgacagcaccaag
gccaacttacactggaagcccgtggacctgagctctgtgcagggagagttcaaggagtac
aggttgtactactggcgagagtccagtctggttccgggtctggtggtcagtaaggagaag
aagaccaaaggtttctacagcatcgtggctgagccgtccggcatcctcagcgacctggtg
cccttctcaaaatacaagatgttcctggttgtggccaacaaccgctttgagggtccaccc
agcaacacggtggacatcaccaccaaggagggagtgccagatgcaccaaagtttttcagg
attaaccggagaacttttgacaccatccaccttgaatgggacaaacctctggagcccaac
ggcattctgattggataccagctcaagtaccaaacagtcaatggctccagagtgggtcgt
ccccagttggagactctccctcctaacgtgacaacgtttacccttcgcatgccggaccga
tccacccgctacaagttctacctgtcagcgctcacccaggtgggatcaggggaggtctat
gctgaggagtcccctcacttcgccaatgaagcctacatagaccaggtagacatagccact
caaggctggttcattggcctgatgtgtgccatcgccctcatcatactgatccttctcatc
gtctgcttcatcaagaggagccgcgggggaaaatacccagtccgtgacaaaaaagatctc
cccttggacccagtagatcagaaagaccaggacggatccttcgattaccacagcgacgag
gacaacaagcccctccagggcagccagacgtcgctggacggtaatgtgaaggaaagtgac
gacagtctggtggactacggcgaaggtggtgatggccagttcaacgaggacggctctttc
atcggccagtacactgtgaagaaggacaaggatgagacggagggcaacgagagctctgag
gccacctcacccgtcaacgccatctactcgctggcatag
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integrated database retrieval system