Cyclopterus lumpus (lumpfish): 117731309
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Entry
117731309 CDS
T09199
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04148
Efferocytosis
clum04218
Cellular senescence
clum04310
Wnt signaling pathway
clum04370
VEGF signaling pathway
clum04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117731309
04370 VEGF signaling pathway
117731309
04020 Calcium signaling pathway
117731309
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117731309
09143 Cell growth and death
04218 Cellular senescence
117731309
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117731309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117731309
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117731309
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
117731309
NCBI-ProteinID:
XP_034389468
Ensembl:
ENSCLMG00005016704
UniProt:
A0A8C3A1U0
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Position
5:complement(20669798..20679033)
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AA seq
889 aa
AA seq
DB search
MSSAGVGFTEDLRQDISQEELDFSDLFLYPPGEDFPVGCDKDDSGALLQSDNQPPLLVVD
HLTAYISSSNQPASSQDASSHSPTTANLSGAVFDTLGLASRPGTIPAPSPRIEITPSGDS
LTSQTLKLSPGTKALGAYRECVSPASSNSSTGWPVEAYSPLASPSISPSNGGMGLSSLDL
CPGLQGIHTSSTHSSPGASPRNSVTDETFLVPQHQRTASSLLHQRSRSVSPHGKRSYDLA
HSCQGATPVKQRSRSPSPIPSLHEHQRSYYIQQYQAQAEIQPQTQTSCPGLEEMLNSLSS
SLPRATPYVMVRDAHGPPQRQDCVYGEGYERAIEQERMSRAGAEVKSETFYMLPAVWPSP
HPVHHRALGGLCAAPLPSLEWPLPGQSAQYELLIQQEPRSHHRAHYETEGSRGAVKTPNG
GHPEVQLRGYQGTAPLGLQVFIGTADERILKPHAFYQVHRITGKTVTTPSMERMINGTKV
LEIPLEPKNHMRVMFDCLGILKLRNADIELRNGETDIGRKNTRVRLVFRVHIPQPGGQLV
SLQAASHPIECSQRSAQELPAVERQDLDRCSVLGGQQMVLTGQNFTTHSRVIFSEKTQGG
EQIWEVEATVDRDKTQANMLFVEVPPYRNRTISNPSKVNFYVVNGKKKHSQPQHFIYTPN
IAIKAEPLDDYQLNSYIYSDNQSLSGLSMKSLYHHLDQERNLQSLNVSPTTYHLTTVDPR
AHVLIPDPLDDQPVYYQHRANTLTNNPALYHTANQRYSNCGTALHGSPMASHPTSAPSLC
VSVRTPMAKLGEGPQVGDSFKACVVSRHQSYMQAALPLGKSPPSGYIQAQAQGKAGSRVE
PLTQIDSGRGNHEERAPEGVTVKQENLRYAYLEDVNDIIRRDMKGHNGE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcaggtgtgggcttcaccgaggacctgcggcaagacatcagccaggaggag
ttggacttctccgacctgtttctgtatccacctggggaggactttcctgtgggctgtgat
aaagatgactcaggtgctctccttcagagcgacaaccagcctcctctgctggtggtggac
catctcaccgcgtacatctccagctccaatcagccagcctccagtcaggacgcctcctct
cacagcccaaccacagcaaacctgtccggggctgtgtttgacaccctggggctggcttcg
agacccgggaccatccctgctcccagccccaggattgagatcactccatctggggactct
ctcacctctcaaaccctcaagctgagccctggcaccaaagctctcggggcctacagggag
tgtgtgagccctgccagcagtaactcctccacgggctggcctgtagaggcatactctcct
ttggcttcacccagcatctccccatctaatggaggcatggggttgtccagcttagacctc
tgcccgggcctccagggcatccacacgtcttctacccactcctccccaggagcctcacct
cgcaacagcgtcacggacgagacctttctcgtgccccagcaccaacgcaccgcctcatca
cttctccaccaacgctcccgctctgtctcgccgcatgggaagcgctcctatgacctggcc
cactcctgtcagggggccactccagtcaagcagcgctcccggagccccagccccatcccc
tcgctccatgagcaccagaggtcctactacatccaacaataccaggcccaagcggagatc
cagccccaaactcagacctcctgcccgggcctagaggagatgctgaacagcctcagctcc
agtctaccaagagcgacaccttacgtgatggtgcgagatgcacacgggccgccccagaga
caggactgtgtgtatggagaagggtatgagcgggccattgagcaggagaggatgagcagg
gcaggagccgaggtcaagtctgaaaccttctacatgctcccagctgtgtggccttctcct
catccagtccaccacagagcactcggaggactgtgtgcggctccacttccgtctttagag
tggccgctgcccggtcagtctgctcagtacgagcttctcatccagcaggagcccagatct
caccacagggctcactatgagacggagggcagccgcggagctgtgaagacacctaacgga
gggcatccggaagttcagctccgcgggtaccaaggcacagctccactggggctgcaggtg
ttcatcgggacggccgacgagagaatcctgaaacctcacgccttctaccaagtccaccgc
atcactgggaagaccgtcaccacacccagcatggagaggatgatcaacgggaccaaagtg
ttggagatccctctggagccgaagaaccacatgagagtgatgtttgactgtctaggaatc
ctgaagttgagaaatgccgacattgaactgaggaacggtgagacggacattggacgaaag
aacacacgcgtgcgtttggtgtttcgcgtccacattcctcaacctggaggccaactggtg
tctcttcaagctgcctctcatcctatcgaatgctcccagcgctcagctcaggagctccct
gcagtcgagaggcaggacctggaccgatgctcagtgctggggggtcaacaaatggtcctc
acaggacagaatttcacaactcactccagagtgatattctcagagaagacacaaggtggt
gagcaaatctgggaggtggaagccaccgtcgacagagacaaaacacaagctaacatgctc
tttgttgaggttcctccgtatcgaaacaggaccatttccaacccatccaaagtcaacttc
tacgtcgtcaacgggaagaagaaacacagtcagcctcagcacttcatctacactcctaat
atagccataaaagcagaaccactggacgactaccagttgaattcatacatctactcagac
aatcagtccctgtctggcctgtcaatgaagtcgctttaccatcacctggatcaggaaaga
aaccttcaatctttgaatgtttctccaacaacgtatcatctaaccactgtggaccccaga
gcccatgtcttaatccctgatccgctggacgaccagccagtttattatcagcacagagcc
aacactctgaccaacaaccccgcgctttaccacactgcaaatcaacgttacagcaactgt
ggtaccgccctgcatggttccccgatggcttcccaccctacctccgctcccagcctgtgt
gtcagtgtcagaaccccgatggccaaactgggcgaaggtcctcaagttggtgattcattc
aaggcatgtgtggtgtcaagacatcagagttatatgcaggcagcgctgcccctaggaaag
tctccaccttcaggatacatccaagctcaagctcaaggaaaggctggaagccgagtggag
cctctgacccagatcgactctggtagaggaaaccacgaggagcgagctccagagggggtc
acggtcaaacaagagaatctccgctatgcttacctggaggatgtgaatgacatcataaga
agagacatgaaaggccacaatggagagtga
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