Cyclopterus lumpus (lumpfish): 117731401
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Entry
117731401 CDS
T09199
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04217
Necroptosis
clum04622
RIG-I-like receptor signaling pathway
clum04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117731401 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117731401 (cyldb)
04625 C-type lectin receptor signaling pathway
117731401 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117731401 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117731401 (cyldb)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117731401 (cyldb)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C67
117731401 (cyldb)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117731401 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
DUF5839
Motif
Other DBs
NCBI-GeneID:
117731401
NCBI-ProteinID:
XP_034389635
Ensembl:
ENSCLMG00005013265
UniProt:
A0A8C3G1C7
LinkDB
All DBs
Position
5:complement(3256816..3263273)
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AA seq
715 aa
AA seq
DB search
MEPGAGVRDKFFIVVRGKSRKGFSRGCVGRVEAEKQLGELTGLLYGDGSPKSGGTVRRED
TYPLTRHQAQLLLFVSPASKRLELLCNPQLFAAVCELSPGDLVVVKHKKGHLPALVKNLM
QIGSKKDKDDQQIGRKEDKDDLHLIGFEVEFVDSDPKKPAPLPLFSAADIIQVIPSHSVP
HGLQGKDGQSGSLNRKGVTRFNSMPNIESHPRQVGENRTEPSVIQSQRSSTSHGSLEVGS
MVEVVSNTGVTVYGVVQWLGAPQGKTDKWAGIELDYDVNGCSDGRHGGRRYFTCKGGRAL
FVPVKKCHPDGRFVCTSPGKKSLDPVDTLPVPPFEESEEDAPPIPESEALSLLVGRMKGI
QGHINSCYLDATLFSLFGSSVILDNICRRPADTEEPVTCTLRKIVNRLRRQGFVPAESVM
DFRKQLGCDTFRTEEKDPEEFITVLFQKVLCVEPLLKLRSGQETCQGAYTFQIFLEKEQM
GPMPTVQQLLDTSCLSGDLKFEETPSCLMVQMPRFGNKYKMFPHIIPSTELDITDLLYNS
PRECFVCGHLAEYECLQCLPDRKLQPGRIKQYCSTCNAQVHTHPSRQGHSAKALAVPADA
ASGSPVRRHTMQLFAVLCIHTSHYVSFVKCGPDAHSWLFFDSMADRCGDDQRGYSIPVIR
ACPELGDFLSRPEEELACSNPSQASELVRRLLCDSYMFLYQNPAAPLLKPNQQES
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcgccggagtgagggacaagtttttcatcgtggtccgcggcaagtcgagg
aaaggcttctcccgagggtgcgtgggccgcgtggaggcggagaagcagctcggggagctg
acggggctgctgtacggcgacggcagccccaagagcggaggcaccgtgagacgggaggac
acgtacccgctgacccgacaccaggcgcagctgctgctcttcgtctccccggcgagcaaa
cgcctggagctgctgtgcaacccgcagctgttcgccgccgtgtgcgagctgtctccgggt
gacctggtggtggtgaagcacaagaagggccacttgcccgcgctggtgaagaacctcatg
cagattgggagcaagaaggacaaggacgaccagcagattgggaggaaggaggacaaagac
gacctgcacttgatcggctttgaagtggagtttgtggacagtgatcccaagaagcctgct
cctctccccctgttcagtgcggcagacatcatccaggtgatcccgtcccactcggttccc
catggtctgcaagggaaagacggacaatctgggagtctaaaccgaaaaggggtgacgcgc
ttcaactccatgccgaatatagaatctcatccacggcaagttggagagaaccgcacagag
ccgagtgtcattcagagccaacgttcaagcacatctcatgggtctttggaggtgggctcc
atggtggaggtggtgtccaacacaggcgtcacggtgtacggggtcgtccagtggttgggg
gccccacaagggaagactgataaatgggctgggattgaattggactatgatgtgaacggc
tgctctgatgggaggcacggaggccggaggtatttcacctgcaaagggggcagggcgttg
tttgttcccgtcaagaagtgccaccccgacggcaggttcgtctgcacgtctccaggaaag
aagagcctcgaccccgtcgacacacttccagttcccccgtttgaggagtcggaggaggat
gcgcctcctattcctgaatccgaggccttgtctttgttagtgggacgaatgaaagggatt
cagggtcacatcaactcctgttacctggatgccacgctcttcagtttgttcggctcatcc
gtgatcctggacaacatctgcagaagacctgctgacacggaggaacccgtaacctgcact
ctaagaaaaatagtcaaccgcctgcgcagacaagggttcgtgcctgcagagagcgtgatg
gatttccgcaaacagcttggctgcgacaccttccgaacagaggagaaagacccagaggag
ttcatcacggtcctctttcagaaagtgctttgcgtggagccgctgctgaagctccgatca
ggacaagaaacgtgtcagggtgcctacaccttccagatctttctggaaaaagaacagatg
ggaccgatgcccaccgtccaacagctgctggacacgtcctgcctgtcaggtgacctcaag
tttgaagagacgccgtcctgtctaatggttcagatgccgaggtttggaaacaagtataag
atgtttcctcacataattccctccactgagcttgacatcacagatctcctatacaactct
ccaagggaatgcttcgtctgtgggcatctggcagagtacgagtgtcttcagtgtctacca
gatcgcaaactgcagccagggaggataaaacagtactgctctacctgcaacgcacaggtg
cacacccatccctcacggcagggtcactccgccaaagctctagcggtaccagctgatgcc
gcctctggttcccccgtgcgcagacacaccatgcagctgtttgccgtgctctgcattcac
accagccactacgtgtcctttgtcaaatgcggccctgatgctcactcctggctcttcttt
gacagcatggcagaccgatgcggtgacgatcaacgtggctacagcattcccgtgatccga
gcttgtccggagttgggcgacttcctgtcccggccggaggaggagctggcttgttctaac
ccctcccaggcgtctgagctggtgcgcaggctgttgtgtgactcttacatgtttttatac
caaaacccagccgcaccacttttgaagccgaaccagcaggagtcttag
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