Cyclopterus lumpus (lumpfish): 117731411
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Entry
117731411 CDS
T09199
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117731411 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117731411 (irf6)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117731411 (irf6)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117731411 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117731411
NCBI-ProteinID:
XP_034389647
Ensembl:
ENSCLMG00005008656
UniProt:
A0A8C2XCQ3
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All DBs
Position
5:14215642..14220337
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AA seq
487 aa
AA seq
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MSVTPRRVRLKPWLVAQVDSGRYPDLVWIDREAMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVFDGTKEVPMNPLKIYDVCDIPLPS
INQASSDAGSWTPHEEDGGEEDIPDTPESLPPYPSNGTSPSPLIMWSPSSESQLSSCPPS
NETWPKEESVKIWPKEEPVDVEMHPTPLLPPAPLPDHSMQPPPLPDAFFASPEMWISSLP
MTDLEVQFLYRGKEMCPTANVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFPTTEHI
TNDKQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLIERQRK
IKLFCLESYLSGVIAHQRGQIPNPPHFEINLCFGEEWPDGRPRERKLIMVQIIPVVARML
SEMFSGENTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQNHQGQDGWTLPPGPGLNI
VQALQAQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcacccctcgacgtgtccgcctgaagccctggctggtcgctcaggtggacagc
ggccgatacccagacctggtgtggattgaccgtgaggccatgcgcttcaggatcccatgg
aaacacgccacacgacacacaccgcagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagaccgggaagtttcaagaaggagttgatgaacctgatcctgcaaagtggaaa
gctcagcttagatgtgccctgaacaaaagcagagaattcaacctggtcttcgatggcacc
aaagaggttcccatgaatcctttgaagatatatgatgtctgcgacatcccactgccctct
attaaccaagcctcctcagacgctggttcttggactccacatgaggaagatggtggtgag
gaagacattccagatacaccagagtctctccctccatacccatccaacggcactagtccc
tctcctcttattatgtggtctcctagctcagagtcgcagctttccagttgtcccccttca
aatgagacctggcccaaagaggagtctgttaaaatctggcctaaagaggagcctgtggat
gtggagatgcacccaactcccctgttgcctcctgctcccctgcccgatcactcgatgcaa
ccccctcctctacctgacgccttttttgcctctccagaaatgtggatcagttccctcccg
atgaccgacctggaggtgcagtttctctacagagggaaagagatgtgtcccacagcgaac
gtcagtaacccacagggctgcaggctgttctacggagacctcggccccatggtcaatcag
gaggagctcttcgggccagtgaacttagagcagctacgctttccgaccacagagcacatt
accaatgacaagcaacgggttttcactaaccgcctgctggatgtgatggacagaggccta
atcctggaggtcagcggtcatgatatctacgcagtgcgtctctgccagtgcaaagtgtac
tggtctggcccctgtgctccaaatccagctgctccaaatcttatagagcgccagaggaag
atcaaactcttttgcttggagtcttatctcagtggagtgatagcccatcagcgtggccag
ataccaaaccctcctcactttgaaatcaacctgtgttttggagaggagtggcctgatggg
agacccagagagaggaaactgatcatggttcagatcattccagtggtggcccggatgctg
agcgagatgttttctggagaaaacacacggtccttcgacagcggcagcgttcgcctgcag
atctcaattccagatatcaaagacaacatagtgacccacctaaagcagctgtactgcctg
ctgcagaaccaccagggccaggacggctggacgttgccccccggcccaggcttgaacatc
gtccaggctctgcaggcacagtga
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