Cyclopterus lumpus (lumpfish): 117731419
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Entry
117731419 CDS
T09199
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117731419 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117731419 (snrpe)
03041 Spliceosome [BR:
clum03041
]
117731419 (snrpe)
03032 DNA replication proteins [BR:
clum03032
]
117731419 (snrpe)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117731419 (snrpe)
Spliceosome [BR:
clum03041
]
Complex A
U1 snRNP components
Sm proteins
117731419 (snrpe)
U2 snRNP components
117731419 (snrpe)
Complex B
U1 snRNP components
117731419 (snrpe)
U4/U6.U5 tri-snRNP components
117731419 (snrpe)
Complex C
U2 snRNP components
117731419 (snrpe)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117731419 (snrpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
117731419
NCBI-ProteinID:
XP_034389671
Ensembl:
ENSCLMG00005018855
UniProt:
A0A8C3ABW0
LinkDB
All DBs
Position
5:complement(7015788..7018756)
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AA seq
93 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRLEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVVTT
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaggggacaaggacagaaggtccagaaggttatggtgcagcccattaaccta
attttcaggtatctacagaatcgctcacggatccaggtctggttgtatgaacaggtgaac
atgcggctagagggctgcattattggttttgatgagtacatgaacctagttctagatgat
gccgaggaggtccacatgaagaccaagaacaggaagccgctggggaggatcatgttgaaa
ggagacaacattaccttgctgcagagtgttgtgaccacttag
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integrated database retrieval system
