Cyclopterus lumpus (lumpfish): 117731443
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Entry
117731443 CDS
T09199
Symbol
trim107
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
SPRY
zf-RING_10
zf-Nse
Prok-RING_4
Prok-RING_1
zf-RING_4
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
117731443
NCBI-ProteinID:
XP_034389701
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Position
5:complement(1757944..1763234)
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AA seq
519 aa
AA seq
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MERSEGADRLVDSHQTGGRRAGRGPVTTSVRETGATRSNMEHPEALAVELSCPICLQLFS
DPASLPCGHIYCFSCLQTMGEGLDQHSCPECQAEYQGTKALVKSLKLSSIVETYKATAGK
VESTGNASDEPTNSKHHRDAAAAGPGLQTGSTGQPPSLDQEQGELEMAKPKFRMASQVTE
LSLKLETAESALRKEKERDLEVTTANGRLREKACRLLEQMAELSQSYTLQVKQLIHEELG
PGEASRGARVARASELTKQLRRAMLRAESLLTEDDEAAFRDELRTLQPHIVELLATPVGE
EDDRVEAKLNPARACPKLEKMNTEFRERSGEIQRSLRNTLNPSEVTFDPETAHPNLVLSG
DLKTVTFSAAKQPYPSSPQRFTNFLQVLSTQSFHEGDHCWEVELDGSPWIFGVCYSGTLA
RSGLPSALESSRCSWCLMWFNNLLTAFERGHDVPLKKTTVSCRLEIRLSFKTHRLSFYNV
SPISGTTHVYTFKAHLSEPVHLAYRMMSGNPKGRVTVHS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtccgagggggcggatcggctcgtggactctcaccagaccggaggacgccga
gcaggaagaggtcctgtcaccacgtctgtgagggagactggagcaacgcgttcaaacatg
gagcatccagaagctctagccgtggagctctcgtgccccatctgcttgcagctcttctct
gatccagcgtctctcccctgcggtcacatctattgcttctcctgcctccagaccatgggg
gaaggcctggaccagcacagctgccccgagtgccaggcggagtaccagggaaccaaagcc
ctggtgaagagcctcaaattaagcagcatcgtagagacctacaaagccactgccgggaaa
gtcgaatccactggcaacgcttctgacgaaccaacaaactccaaacaccaccgggacgca
gcggcagctggaccgggccttcagactggatccacggggcaacccccgtctttggatcaa
gaacaaggcgagctggaaatggccaaacctaaatttagaatggcgtctcaagtcacagag
ttgagcctcaagttggagacggcagagagtgcgctgaggaaggagaaggagcgggacttg
gaggtgaccacggctaacggtcggctgagagagaaagcatgcagacttctagagcagatg
gctgagctgtctcagagctacacactgcaggtgaagcagctgatccacgaggagctcggt
ccaggcgaggccagcagaggcgctcgagtggctcgcgcttctgagctgacgaagcagctg
aggcgagcgatgctcagagcggagtccctcctgacggaggatgacgaggctgcattcagg
gacgagcttcggactctccaaccacacattgtggagttgctggccacgccggtgggagaa
gaggacgaccgcgttgaagcaaaactcaaccccgcccgcgcctgtcccaagctggagaaa
atgaacaccgagtttagggaaagatctggggagattcagcgctcccttcgaaacaccctc
aacccctcagaggtgacctttgacccagaaacggcccaccccaacttggtcctctcgggg
gacttgaagacggtgactttcagcgctgccaaacagccctacccgtcctctcctcagagg
ttcaccaacttccttcaggtgctcagcacccagagcttccacgaaggcgaccactgctgg
gaggtggagctcgacggttccccgtggatcttcggtgtgtgctacagcgggacgctagca
cgtagcggactgccctcggctcttgagagcagccggtgctcctggtgtctgatgtggttc
aacaacctgctgacggccttcgagcggggccacgatgtgccgctgaagaagaccacggtc
tcctgcaggctggagatcagactgagcttcaagacccaccggctgagcttctacaacgtg
agccccatcagcgggacgactcacgtgtacacgttcaaggctcacctgagcgagcccgtg
cacctcgcctacaggatgatgtcggggaacccgaaaggccgcgtcactgttcattcatga
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integrated database retrieval system
