Cyclopterus lumpus (lumpfish): 117731455
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Entry
117731455 CDS
T09199
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117731455 (ccdc174)
03041 Spliceosome [BR:
clum03041
]
117731455 (ccdc174)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117731455 (ccdc174)
Spliceosome [BR:
clum03041
]
Complex C
Other components
EJC/TREX
117731455 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
117731455
NCBI-ProteinID:
XP_034389725
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All DBs
Position
5:13285356..13291117
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AA seq
614 aa
AA seq
DB search
MDKKKKPFAVTASSLVDLKAELYRKQEQFKQEKLGHEHSGAGLKSKIKKPNVWTKQNAGV
SARAEKDAEQLAEEQNSLDTSKRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKIIDQ
KREMHAQKKTERDDEERHNSSPVPPPQNSEEEWVDYVDALGRSRRCMKKDLPGFKKMDQD
LQGKEKASADKTLLSEDMRRELQRQEWEREEEEAMKRPVGPLHYEDIRGQEARDLGVGYF
AFAQDEEQRRKQRDTLDMLRDQTTDQRTKREQLKDKRQAILRARLTKVRQRKMKKAKLDG
TEDEQREEENEGGEDEGEIIGPALPPEDSPEVSTVKKVVVEIQERKDTKPGVPHVREWDR
GKEFMFTEWTNRRREERESDFAPPSAYFTEWKRAGPGKIKPQENKSKMSFKWTKVPEGVS
ESKEEEPQSQPETAPPPPSPPSPPPPLPPQQDLSPPSQPQTSSQLSPSDLSADSAPASAP
SLNPQYAPPFYPMFPSPQFAGPHHQPPFFPQQYPPQYLPQYPPQYPPQYPPQYSSQYSPQ
YSPQYPPQYPPQYPPQYPPQYPPQLQSQPQPQPQPQPQPQPQPQPQPQQPVDLSQARQPT
ESLDDMLSFYRSTT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaacccttcgctgtgactgcttcatcgctggtggacctgaaagct
gagttgtacagaaagcaggaacaattcaaacaggaaaaacttgggcatgaacattctggt
gctggattaaaatccaaaatcaagaaacctaatgtctggactaaacaaaacgctggtgtt
tctgcaagagctgagaaagatgcagagcagctggctgaggagcagaacagccttgacaca
tccaaacgtaagttggaggagaaggccaaactctatgagcaaatgaccaaaggagacttt
ccagatgaagagacagagggactgttcctggttgatttcacccagaagataattgaccaa
aagagggaaatgcatgcacagaagaaaacagaaagagatgatgaggaaagacacaactca
tctcctgtccctcctcctcaaaactcagaagaggaatgggtggattatgtggacgcttta
ggccgatctcgaagatgcatgaagaaagacctgccaggttttaagaaaatggaccaagac
cttcaaggaaaagaaaaagcttcagctgataagaccttactctctgaggacatgcgtcga
gagctgcagaggcaggagtgggagagggaggaagaggaggctatgaagagacctgtagga
ccgctccactacgaggatattaggggacaagaggctcgagatctcggtgtaggttacttt
gcgttcgctcaggatgaagagcagcgcagaaagcagagagacactctggacatgctgaga
gaccagacaacagatcagcgcaccaagagggaacaactgaaggacaagaggcaggccatc
ctgcgggcccgattgaccaaagtgaggcagaggaagatgaagaaggccaagctggatggt
actgaggatgagcagagagaggaggagaatgaaggaggggaggatgaaggagaaattata
ggacccgcgcttccaccagaggactctccagaagtaagcacagtgaagaaggtggtagtg
gagatccaggaaaggaaagacaccaaaccaggagttcctcatgtccgagaatgggacaga
ggcaaagagtttatgtttaccgagtggacaaatcgtcgtcgcgaagagcgagagtcagat
tttgcacctccctctgcgtactttactgagtggaagagagcaggacctgggaagattaaa
cctcaggagaataaatccaagatgtcctttaagtggaccaaagtcccagaaggagtctct
gaaagcaaggaggaagaaccacaatctcagcctgaaacggctccaccacctccttcacct
ccttcacctcctccgcctcttccacctcaacaagatctttcacctccttcacaaccacag
acttcatcgcagttatcaccttcagatctctcagcagattcagctcctgcgtctgctcct
tctcttaatccccagtatgcccccccattttatccgatgtttccttccccccagtttgct
ggaccacatcaccagcctcctttctttccccaacaatacccaccccagtatctaccccag
tatccaccccagtatccaccacagtatccaccacagtattcatcccagtattcaccccag
tattcaccccagtatccaccccagtatccaccccagtatccaccccagtatccaccccag
tatccaccccagcttcagagccagcctcagcctcagcctcagcctcagcctcagcctcag
cctcagcctcagcctcagcctcagcagcctgtagacctcagccaggccagacagccgacg
gagagtctggacgacatgctttccttctacaggagcacaacctga
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