Cyclopterus lumpus (lumpfish): 117731495
Help
Entry
117731495 CDS
T09199
Symbol
chrnb5a
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117731495 (chrnb5a)
04082 Neuroactive ligand signaling
117731495 (chrnb5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117731495 (chrnb5a)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117731495 (chrnb5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF2754
Motif
Other DBs
NCBI-GeneID:
117731495
NCBI-ProteinID:
XP_034389788
Ensembl:
ENSCLMG00005019115
LinkDB
All DBs
Position
1:12355882..12371893
Genome browser
AA seq
508 aa
AA seq
DB search
MTANTVLLLFILSHTGSRAENAEERLVNYLLGPERYNKLIRPAVNKSQQVTISIQVSLSQ
LISVNEREQIMTTNLWLFQEWNDYRLRWDPEKYEGIKKLRIPSKHIWLPDIVLYNNADGV
YEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVQNFPFDQQNCTLKFRSWTYDHTEVDLI
LTSDFASRDDFTPSGEWDIVSLPARKNEDPNDITYLDITYDFVIKRKPLFYTINLIIPCV
LITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMV
LVTFCIVTSVCVLNVHHRSPSTHHMPDWVKRFFLVRLPTFLFMRRPGSSNIRDKLRRKYA
NPSAIGKNNSQSSTDKRQYSNIRLGGIQTDADSFYVNEDLANKFCWKGDDIPDGGCGFSD
FRRPSAVQWDADVEEAVDGVRYIAEHMKTEDDDEGIIEDWKYVAMVIDRLFLWIFILVCL
VGTLGLFMQPLFQSYNTPTADDPEYGDF
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaacactgttctcctgctcttcattctctctcacacaggcagcagagcagag
aatgcagaggaacggctggtgaactacctgttgggtccagagcgctacaacaaactgatc
agacctgctgtcaataagagccaacaggtcaccatctccatacaggtgtctctgtcgcag
ctcatcagtgtaaatgagagagaacagataatgacgaccaacttgtggctgtttcaggag
tggaatgactacaggctcagatgggacccagagaagtatgaaggcatcaagaaactacga
ataccatccaaacacatctggcttcctgatatagtgctatacaacaatgctgatggcgtg
tatgaggtttccttctattgcaatgcggtggtctccaacacaggagacatcttctggctt
cccccggccatctacaagtcggcctgcgccatcgaggtgcagaacttccccttcgaccag
cagaactgcactctcaagttccgctcctggacctacgaccacacagaagttgatctgatc
ctcacaagcgacttcgccagccgcgatgactttacgccgagcggggaatgggatatcgtc
tcgcttccggcgcgcaaaaatgaggaccccaatgacatcacctacctggatatcacctat
gattttgtgatcaagaggaagccgctgttttacaccattaacctgatcatcccctgtgtg
ctgatcacgtcgctggctatcctggtgttctacctgccatcagattgcggggagaagatg
acgctgtgcatctctgtgctgctggctctcactgtgttcctgctgctgatatcaaagata
gtgccacctacttctctcgcagtgccactcataggtaaatacttgatgttcaccatggtg
ttggtcactttttgtattgtgaccagcgtctgtgtcctcaatgtgcatcaccgctccccg
tccacccaccacatgcccgactgggtcaaacgcttcttcttagtccgcctccccaccttc
ctcttcatgaggcgtccaggatcttccaacatccgtgataaactccgcaggaagtatgca
aacccgagtgccatcgggaaaaacaattcccagagcagcacagacaagaggcagtattca
aacatcagactcggtgggatccaaacagatgccgactctttctacgtgaatgaggacttg
gcaaacaagttttgctggaagggggacgacatcccagatgggggttgtgggttttcagac
ttccggaggccttcggcggttcagtgggatgcagatgtggaggaggcggtggacggagta
agatacatcgccgaacatatgaagacggaagatgacgatgaagggatcatagaagactgg
aagtacgtagccatggtgatagaccgtctgttcctgtggatcttcatcctggtgtgtctg
gtgggaactctggggctcttcatgcagccgctgttccaaagctataacacacccacagct
gatgacccagagtatggagatttctaa
DBGET
integrated database retrieval system
