Cyclopterus lumpus (lumpfish): 117731629
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Entry
117731629 CDS
T09199
Symbol
pax5
Name
(RefSeq) paired box protein Pax-5 isoform X1
KO
K09383
paired box protein 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117731629 (pax5)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117731629 (pax5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
117731629
NCBI-ProteinID:
XP_034389847
Ensembl:
ENSCLMG00005000023
LinkDB
All DBs
Position
1:4011156..4061352
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AA seq
423 aa
AA seq
DB search
MDQGPKSPALRLGRAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLA
ERVCDNDSVPSVSSINRIIRTKVQQPPGQTGSVLAHNLATSVAASQVSAVTGDSAGSSYS
ISGILGISSAADVGKRKRDEGLQESPLANGHAHGGRDFLRKQMRGELFSPQQIEVLDRLF
DGPCPIQSGSDLYVSPDSGKTSDYSAMASLAGGLDEMKNSLANPGGGAELGASVSGPQSY
SLVPGRDLASTTLPGYPPHVPPTGQGSYSTPSLTGMVPGGDFSGSPYSHPQYSTYNESWR
FPNPSLLVFQQDYGSLLGTEIGCSSSLFTSQAGQMQGSPYYYSATSRGAGPAATATASAY
DRH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggggcccaagagtcctgcactgcggctggggagagcaggacacggcggggtg
aaccagctcggaggcgtgtttgtaaacggccggcccctcccggacgtggtccgccagcga
atagtggaactcgcccaccaaggggtccggccctgcgacatctcacgccagctgcgagtc
agccacgggtgtgtcagcaagatactgggcaggtactacgagacgggcagcatccgcccc
ggggtgatcgggggatccaaaccaaaggttgctactcccaaagtggtcgacaagatcgcc
gattacaaacgccaaaaccccaccatgttcgcctgggagatccgggaccggctcctggcc
gagagagtgtgcgacaacgacagcgtccccagcgtcagctccatcaacaggatcattcgg
acaaaggtgcagcagccgcccggccaaaccggctcagtgttggctcacaacttagcgacg
tccgtagcggcctcacaagtgtcagcggtgaccggcgactcagccggctcctcgtactcc
atcagcggcattctgggtatcagctcagccgctgacgtgggcaagaggaagagggacgaa
ggtttgcaggagtcaccgctggccaacgggcacgcccacggcgggcgggacttcctcagg
aagcagatgagaggggagctgttctcgccgcagcagatcgaggtattggaccgcctgttt
gacggaccctgtccgatccagtccggctctgacctctatgtgagccctgactctggcaag
acgtccgattactcggccatggcctcgctagccggcggactggacgagatgaagaacagt
ttggccaatcctggtggaggggcggagttaggagccagcgtgtcgggtccacagtcctat
tcactcgttccaggccgagacctagccagcaccactctgccaggctaccctcctcatgtt
cctcccaccggacagggcagctactccaccccctccctcaccggcatggtacctggtgga
gatttttccggaagtccgtattcccatcctcagtattccacatacaacgaatcctggaga
tttcccaaccccagtttattagtgttccagcaggattatgggtctctcctggggacggaa
atcggctgctcctccagcctcttcaccagccaggcaggacagatgcaagggtcaccgtac
tactacagtgcaacgtcacggggggcaggccctgctgccactgcaacagcctccgcctac
gaccgccactga
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