Cyclopterus lumpus (lumpfish): 117731694
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Entry
117731694 CDS
T09199
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117731694
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117731694
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117731694
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
117731694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
FAM92
Motif
Other DBs
NCBI-GeneID:
117731694
NCBI-ProteinID:
XP_034389891
Ensembl:
ENSCLMG00005005870
LinkDB
All DBs
Position
6:24174384..24229528
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AA seq
1147 aa
AA seq
DB search
MYSGYGGSPSRTLSTMSLSVRPARRLNSRAITRSQSFTGVNTYDKAYRNLSVFSAPGLSR
KPSRASRMFTMSKSNPPPKVPQPERLDLVYEALKKGLQSYLQVHQMDLDSLSRQMKESKR
NSRLGFLYELDKQVKVTERYIRRLEFHLSKIEELYDAYCLHRRLRDGASKMVKAYTASQL
SKEARESLAEANKGYKEYTENMCLLESELENQLGEFHIRMKGLAGFARLCAGDQYEIFMK
YGRQRWKLRGRIEINGKQVWDSEEMVFVPLVSDFLSVKVTELKSLANHVVVGSVSCETKD
LFAALPQTVAVDINDLGTIKLSLEVTWNPFDKDDQGSVASTVNKAPTVSKRISTIFNQSP
PDTPSLREQAFYSLPRSLNRRQHWPLLDIFRDTLSQSCSCSDSSPTRPPTANMLRRHEEV
DNGTAWSNSSESSDDSSSPRLSVGGLHDSTHHKSVVVTPDIQPAVSGSSSPQPDISFCPR
DSASSTPNSTHKVSTIREVPNTSGHQAQRDREEEKGTVTVVTRPDSEEKDAGKRSSTTAD
GAANSHASRSYLRSLSHISENSADGIVLTDRSAESGEVMSLALGLSANDIEMELPSRTPE
PPSCAASDSSDMSPTPDDVTDQHRKQQDTSSTVLSPSPPRTEVVESNTPSQMNTHPPPES
NAVPKSNMHPESNAVPESNARPESGDVTYIARRVSVEEETAAAGADCLSGEGDGLVDSGL
EDALAAVVSSLDDYRGQFPELQLLEQELKLLQVTLKGGRHSRSPSVVSLTVETALCSFDF
LNTSDWEEEEEDKGNKRSRSGRSLQDRGWNSPTSPLTTGCTTLDLSLVVHLENCSIQLLC
LGMFGPLRCGEMYALDRLLREARVLEIIRRVANGNPNRLRHPADVIPQLGLCLGAVSLWQ
QCVGQGSVYSVSAESFLNTLSTVYSGILPERAGNMADTVFLSLVERVLDQRLPRRGGSRD
GVMVTLFQLWSYLEANSIIDMETLITELAEEVWLVQSLASCDQDVIVPALRRPAECSLRR
EGLHAVAKLLKDPRGKVSASASSVLRSLAAQPPQREQALVSCLELLEDEDVDTRVCGCKA
LACLKAKESIDQLVYLCRTDKDEVRDAAKQALLVLGEEGKMAYRHVETSQDSIPRLFAPG
SMASTAF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtggatatggagggagtccatcccgaaccctctccaccatgtcgctgtctgtt
cgcccagccaggcgcctcaactccagagccatcactaggagccagagcttcactggagtc
aacacctacgacaaggcctacaggaacctctcggtgttcagcgctccgggtctcagcagg
aagcccagcagagccagcaggatgttcaccatgtccaagtccaacccaccacctaaggtt
cctcaaccggagcgactggatctggtctacgaggccctgaagaaaggccttcagtcctac
ctgcaggttcatcagatggacttggacagcctcagcagacagatgaaagaatcaaagagg
aactccagactgggtttcctgtatgaactggacaagcaagtgaaggtgactgagaggtac
ataagacgactggagtttcacctcagcaagatcgaggagctgtatgacgcctactgcctg
cataggagactccgggacggagccagcaagatggtgaaggcttacactgcctctcaactc
agcaaggaggccagggagagtttagcagaagccaataaaggatacaaagagtacaccgag
aacatgtgtttgttggagagcgagttggagaaccagctgggggagttccacatcaggatg
aaaggtctggctggatttgctcgattatgtgctggtgaccagtatgagatctttatgaag
tacggtcggcagcggtggaagctccgaggcagaatagagatcaacggaaaacaggtgtgg
gacagtgaagagatggtgttcgtgccgctcgtcagtgacttcctgtctgtgaaggtgaca
gagctgaagagcttagccaatcacgtggttgtagggagtgtttcctgcgagaccaaggat
ctgtttgctgcactcccccagacggttgccgtggatattaatgaccttgggactattaaa
ctaagcctcgaagtcacctggaatccatttgataaagatgaccaggggtcagtggcaagc
acagtcaacaaagctccaaccgtcagtaagagaatctccaccatcttcaaccagagtcct
cctgacacgccatctttacgtgaacaagccttctattctctgcctcgaagtctgaatagg
cggcagcactggccgctgctggacatcttcagagacacgcttagccagagctgttcctgt
agtgacagctcaccaacaagaccacccactgcaaacatgctccgccgccacgaagaggta
gacaacgggacagcgtggtctaattcatcagaatcttctgatgactcctccagtcctcgg
ctctctgtgggagggctacacgactctacgcaccacaagtcagtggtggtgacaccagac
atccagccagctgtgagcgggagttcctccccgcagcctgacatctcgttctgccccaga
gactccgcctcctcaactccaaactccacccacaaagtcagcaccatcagggaggttccc
aacacatccggacaccaagcacagagggacagggaagaggaaaaggggacggtcactgtg
gtgacgagacctgacagcgaggaaaaggacgcagggaaacggtcttccacaacagcggat
ggggcggccaacagccacgcctcccgcagctacttgcggtccctcagccacatcagtgaa
aacagcgccgacggcatcgtgttgacggacaggtcagccgaatccggagaggtgatgtct
ttggccttggggctgtccgccaatgacattgagatggagctgcccagcagaactcctgag
ccgcccagctgtgctgcctcagactcctcagacatgtcaccaacgcccgacgacgtcaca
gatcagcacaggaagcaacaggacacatccagcactgtcctgtcaccctcccctcccagg
actgaagtagtggagtcgaacactccgtcacagatgaacacacacccaccgccagagagc
aacgcggtcccaaagagcaacatgcacccagagagcaacgcggtcccagagagcaacgcg
cgcccagagagcggggatgtgacgtacatagcccggcgggtgtcggtggaggaggagacg
gcggctgcaggagcagattgtctgtctggggagggtgacggtcttgtggacagtgggctg
gaggatgccctagcagctgtggtctcctctctggatgattacagaggacagttccctgag
ttacaactactggagcaagagctgaagctgctgcaggtcacgctgaagggcggtaggcac
agccggtcgcccagcgtggtcagcctcacagtggaaacggctctgtgcagcttcgacttc
ctcaacacgtctgactgggaggaggaagaggaggataagggcaacaagaggagtaggagt
ggcaggtctctgcaggacaggggctggaacagccccacgtcccccctcaccacaggctgc
accactttagacctctccctggtggtccacctggagaactgcagcattcagctgttgtgt
ctggggatgttcggcccgctgcgctgtggggagatgtacgccttggacagactgctgaga
gaggctcgagtcctggaaatcatccgacgcgtcgccaacggcaaccccaaccgcctcaga
catcctgctgacgtgataccacagctgggcctgtgcttgggtgctgtgtcactatggcaa
cagtgtgtggggcagggcagcgtgtacagcgtgtctgcagagagcttcctaaatacgctg
tctacagtctactccgggattctgccggagagggccggcaacatggccgacacagtgttc
ctgagtctggtcgagcgagtgctggatcagaggttaccgcggcggggcggtagcagagac
ggagtgatggtgacgctgttccagctgtggagttacttggaggctaacagcattatagac
atggaaacactcatcaccgagctggcagaagaagtgtggttggtgcagagcctggcgtca
tgtgaccaggatgtgatcgtgcccgctctgcggcgtcctgcagagtgcagcctgaggagg
gaggggcttcacgctgtggccaaactactgaaagacccccgaggcaaagtgtcggcgtcc
gccagctccgtgctgaggagcctggctgcccagcccccacagagagagcaggccttggtc
agctgtctggagctgctggaagacgaggacgtggacaccagagtgtgcggctgcaaggcc
ttagcttgtctcaaggccaaagagagcattgaccagttggtgtatctttgtcggacggac
aaggacgaagtgcgagatgctgccaaacaagcgctgctagtgctgggagaggaggggaag
atggcctacagacacgtggagacgtcccaggacagcataccgagactctttgctccagga
agcatggccagcaccgctttctaa
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