Cyclopterus lumpus (lumpfish): 117731702
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Entry
117731702 CDS
T09199
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117731702
03036 Chromosome and associated proteins [BR:
clum03036
]
117731702
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117731702
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117731702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
117731702
NCBI-ProteinID:
XP_034389913
Ensembl:
ENSCLMG00005005872
UniProt:
A0A8C2WXN0
LinkDB
All DBs
Position
6:24232529..24249070
Genome browser
AA seq
839 aa
AA seq
DB search
MDRGPTEGVEGMEVPPKDFPSIQSVHSQDAMVADLLQQAAEAGGVVEGHVGVVLEQGHGM
VAATQQQLMEAGVSVDGGAGVEMMVMDSLDPTLLQMKTEVMDAAVGGAHQATVTTVDQTQ
IITLQVVNMEEQAALGLGELQLVQVPVSATTVEALHQGTFVDSTAMPKDGDPVICHTLPL
PEGFQVVKVGANGEVETVEQEEGEAHPEEEDEEVGNQLLDEVEEEDPIQPQNDDQTWAKD
PDYQPPSGGLKKPKKLAMRSDGLLFVQGKKNRLRYAEGDKDMDVSVYDFEEEQQEGLLSE
VNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLC
GRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYA
SVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQS
GTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHER
YALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLLD
MHFKRYHDPNFIPTAFVCPKCSKTFTRRNTMARHSDNCTGEVEDAENGDPPPKKGRRGRK
RKMRSRRDEDDSEEDHAELDEEEEEDEAEGDAEEEALLLQEEEEPESMELDQAPAAIPIP
APDEPPVKRKRGRPPKNAPKPPTPSKSARVAAKVAASAAAIIQVEDESTGAVENIIVKKE
EGDASAETPLEQGAALTVEGVDLDGEGVETVELAVSEETAAAAANGELTPEMILSMMDR
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggacagagggccaacagagggggtagaggggatggaggtcccgcccaaagacttcccc
tccatccagtccgttcatagccaggatgccatggtggccgacctcctccagcaagctgcc
gaggccgggggcgtggtggagggacacgtaggagtcgtcctggagcaaggtcacgggatg
gtagcagccacccagcagcagctgatggaagcgggggttagtgtggatggtggagcaggg
gttgaaatgatggttatggactcactggatcccaccctgttgcagatgaagactgaggtg
atggatgctgcagtgggtggcgctcaccaagcaaccgtaacaacagtggaccagactcaa
atcatcacactacaggtggtgaacatggaggagcaggcggctctgggtctcggggagctc
cagctagtccaggtgccggtctctgccaccactgtcgaggccctgcaccagggcaccttt
gtagactccactgctatgccgaaggacggagacccggtcatctgccacacactgccgctg
ccggagggctttcaggtggttaaggtcggagctaatggggaggtggagacggtggagcag
gaggagggggaagcccacccggaagaggaggatgaggaggtggggaaccagctgctggac
gaggtggaggaggaggatcccattcagcctcagaatgatgaccaaacctgggctaaagac
ccagactatcagcccccatctggaggtcttaagaagcctaaaaagcttgcgatgaggtct
gatggactgctgtttgtccagggtaaaaagaatcgtctgcgttacgcggaaggggataag
gacatggatgtcagtgtctatgactttgaggaagagcagcaggagggccttctgtctgag
gtcaatgctgagaaagtagtgggcaatatgaaaccacccaaacccaccaaaatcaagaag
aaaggagtgaagaagacgtttcagtgtgagctgtgtagctacacgtgccctcggcgctcc
aacctggacagacacatgaagagccacacagacgagagacctcataagtgtcacctgtgc
ggaagagccttcaggacggtcaccctgctaagaaaccatctcaacacacacactggaact
cgcccacacaagtgcacagactgcgatatggctttcgtgactagtggagagttggtccgt
catcgtcgctacaaacacacacatgagaaacccttcaaatgctccatgtgtgactacgcc
agtgtggaggtgagcaaactaaagcggcacattcgttcccacaccggcgagcgtccattc
cagtgcagtctttgcagctacgccagcagagacacatacaagctgaagagacacatgagg
acacactcaggagagaaaccttacgagtgctacatctgccatgcccgattcacccagagt
ggaaccatgaagatgcacattctgcagaaacacacagagaacgtggctaaattccactgt
ccacactgtgacactgtcatcgcacgcaagagcgacttgggtgtccaccttcgtaagcag
cactcattcattgagactggaaagaagtgtcgttactgcgacgccgttttccacgagcgc
tacgccctcatccagcaccagaagtcccataagaacgagaagaggttcaaatgcgacatg
tgtgactactgctgccgccaggagcgccacatggtcatgcaccgtcggactcacactgga
gagaaaccatacgcctgcagccagtgtgagaagaccttcagacagaagcagctgctggac
atgcacttcaaacgctaccacgaccccaacttcatccccaccgccttcgtctgccccaag
tgtagcaagaccttcacccgcaggaacaccatggctcgccactccgataactgcaccggt
gaggtggaggatgccgagaatggagacccacccccgaagaaagggaggagaggaagaaag
aggaagatgaggagcaggagagatgaggatgacagcgaggaggatcatgctgagctggat
gaggaagaagaggaggacgaggctgaaggtgacgctgaggaagaagcattactgctgcaa
gaagaggaggagccagaaagcatggaactggaccaggcccctgccgccatcccaataccg
gctcccgatgagccacctgtcaagaggaaacgaggccgacccccaaagaacgcacccaag
cctccaacaccgagcaagtcagccagggtggctgccaaggtggcagcttctgctgctgcc
atcattcaggtggaggacgagagcaccggagcagtggagaacatcattgtgaagaaggag
gaaggcgacgcctctgcagagacgcctctggagcagggagcggccctgaccgtggagggg
gtggacctagacggggaaggggtggagactgtcgagctggccgtgagtgaggaaacggcg
gccgccgccgccaacggagaactgactccagagatgatcctcagcatgatggaccggtga
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