Cyclopterus lumpus (lumpfish): 117731706
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Entry
117731706 CDS
T09199
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00600
Sphingolipid metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117731706 (smpd3)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117731706 (smpd3)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117731706
NCBI-ProteinID:
XP_034389918
Ensembl:
ENSCLMG00005008565
LinkDB
All DBs
Position
6:25381701..25445501
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AA seq
722 aa
AA seq
DB search
MVLHTTPYSGACLHFLDGLSWSLVFPCYWLLDQLLASCVATSLEKHRRSQDPCSFLTLCV
LISAPLYLLLLLASLPLALLGFVIWAPLQAVRQPYLYTHRRPDKHQAEQGQAGPGGVGLG
EWRPQGRSFCFCSANVCLLPDSLARFNNLSDTHRRAREVGKRIRNGASRPQIKIYIDSPT
NTSISAVSFSSLATGFRRTSSLDQRPDQTHTTNGRADPETEPLTECPNHPSGAADCPVHP
SAGDQGTSECPLHPDGGDTTAVCPLHPVGTNGSSDCPVHTSGEAPDCPLHSLQDGQGLHD
CPVHGEGTQTKPSSDCPLHASGVQISISAPEPDPQEEEAETGNHRPGEQTAGDTGSMTAS
RESLARYHGGDGGIGISSNNTLSHVPRTSIFKRPGRKRRHGDETFDHEISAFFPANLDFL
ALQEVFDHGSTTRLRRQLHRYFPYVLSDVGRYGWKGCCSSFKFLNSGLMLASRYPILDAR
FECYPNGRGEDALAAKGALFAKVHVGTSHQEQRVVGYLTCTHLHAIEGDASVRCEQLDLL
LQWGAEFRQSSSQPPEGEKVLEDLVAFDVVLGDLNFDNCSSEDKLEQQHALFTQYKDPCR
LGPGEDKPWALGTLLDPSGLYDDEVSSPESLQKVMENEEGRKEYLVFPPSKSHCPASSQK
GRKIPLKGNGRRIDYMLYSDEGLQQDWKLEIEEFSFVTQLAGLTDHLSVAMRLAVSTGEE
EP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggttctccacaccaccccttactctggggcctgtctgcacttcctggatggcttgtcg
tggagcctggtgttcccctgctactggctcctggaccagctcctggcctcctgcgtggcc
acgtcgctggagaagcatcggcgctcccaggacccctgctctttcctcaccctgtgcgtg
ctgatctccgcgcccctttatctactcctccttcttgcctccctgccactcgccctgctg
ggcttcgtcatctgggctcccctgcaggccgtccgccagccatacctgtacacccaccgc
aggccagacaaacatcaggccgagcagggccaggccgggccagggggggtcggccttggg
gaatggaggccacagggcagaagcttctgtttctgcagtgccaacgtgtgcctgttgccc
gactctctggccaggttcaacaacctgtcggacacgcacaggagagcccgggaggtgggg
aagaggatccgcaacggtgccagtcggcctcagattaagatctacatcgactcacctacc
aacacttccatcagcgcagtgtccttcagcagccttgccacaggattccgccgcacctcc
tctctggatcagcgcccagaccaaacccacaccaccaacggacgagccgaccccgaaacc
gaacccctcaccgagtgcccaaatcacccctcaggtgccgccgactgccccgttcacccc
tctgcaggagaccagggtacctctgaatgccctcttcacccagacggaggagacacaacc
gcagtctgtcccctccaccctgtggggaccaacggtagctcagactgtcccgttcacacc
tcaggggaggctccagactgccccttgcattccttgcaagatggccagggccttcatgac
tgtccggtgcatggggaagggacccagacaaaaccgtcctcagactgcccacttcacgcc
tcaggggttcaaatcagcatcagcgccccagagccagacccacaagaggaggaggccgaa
acagggaaccatcggcctggggagcagacggctggagacacgggcagcatgactgcctcc
agggaatcccttgctcgttaccatggcggtgacggtggcattggcatatcctccaacaat
actctctctcacgtccctcgcacgtcaatctttaagcgccccgggagaaaacgccgccat
ggagatgagacattcgaccacgagatctctgcctttttccctgccaacttggattttctg
gctctacaggaagtgtttgaccacgggtcgacgaccagactgcggcgtcagctgcatcgt
tacttcccctacgtgctgagcgacgttggccggtacggctggaaaggatgctgctcaagc
ttcaaattcttgaacagtgggctgatgctggccagccgttacccaatcctggatgcacgg
ttcgagtgctaccccaacgggagaggggaggatgcactggcagccaagggcgcgctgttt
gccaaggtccacgtgggcacctcgcaccaggagcagagggttgtgggatacctcacgtgt
acgcacctccacgccatagaaggggatgcgtccgtacgctgtgagcagctggacctgttg
ctccagtggggggcggagtttcgccaatcctcgtcccaaccacctgaaggagagaaggtt
ctggaagacctggtggcctttgatgtcgtcctgggagacctcaacttcgataattgctct
tcagaggacaagctggagcagcagcatgcactttttactcaatacaaggacccatgtcgc
ctggggccaggggaggacaaaccatgggctctgggtactttgctggaccccagtggcctt
tatgacgacgaggtcagttcaccggaaagtttacaaaaagtgatggagaatgaggagggg
aggaaggagtacctggtgttccctcccagtaagagccactgtcccgccagcagtcagaag
gggaggaagatccctctgaagggcaacgggcggcggattgactacatgctctacagcgac
gagggcctgcagcaggactggaaactggaaattgaggagttcagctttgtcacccagttg
gctggcctcaccgaccacctgtctgtggccatgcgattggctgtttccaccggggaagag
gagccttag
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