Cyclopterus lumpus (lumpfish): 117731710
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Entry
117731710 CDS
T09199
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117731710 (sntb2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
117731710
NCBI-ProteinID:
XP_034389925
Ensembl:
ENSCLMG00005018122
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All DBs
Position
6:25749481..25773660
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AA seq
594 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAAELTRETLTLTAEAEAAGPGGNHWDYDNSSAGLRN
GMSNGNDPGASPGNPGRGPSSGPDQLQNHNQGGRGRSGSPGRGGVSRGQHEGNYGPNSPG
KYPNNGTNSEFGSPGSSYGSPGSSFGSRQGDVPVSLDGSSEAVRKVRVVKQESGGLGISI
KGGRENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEV
TLEVKYIREVSPLFKKPSLVADLPWDGVRPQSPSYSGSEDSGSPKHCGSSSSKDRKVMSL
KMCFISRNLTMPDLENRLLELHSPDGQHTVVLRCKDGPTANSWFTAVHTNIAALLPHTLA
HINAYLGASSSAAAHPHLKHIGWLAEQVHLEGGRQQYKPVVMALTEKDILLFESVPWSRE
SWSMPLLTHPLLATRLVHSGGTRGSPAQGSDLVFATRTGTGRGIESHIFRVETHWDLSSW
TRALVQGAHAAAELIKEVSIGCTLNRQDVRLTLHYEKGFTVMREPVDPAVGAVLYRYPYE
KLKMSADDGIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLTRMGLLT
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttggaccagagcggacaaaaacgggcaactggaccttctgctccgcgaccgc
tggatccgagtggccgccgaactcacccgagaaacgctgactttaacggccgaagcggag
gcagccggaccgggggggaaccactgggactacgacaactcgtcggcgggcctgcgaaat
ggcatgtcgaacggaaacgacccgggagcgagtccggggaaccctggccgcggtccgagc
tcgggtccagaccaactccagaaccacaaccaggggggtaggggacgcagcggcagcccg
gggcgcgggggtgtcagtcggggtcagcacgaaggcaactacggtccgaacagccccggg
aagtacccgaataacggcaccaactctgaattcggaagccccggatccagctacggcagt
cccgggtccagcttcgggtcgagacaaggcgacgtccccgtcagcctggacggctcctcg
gaagcggtgcggaaagtccgagttgtcaaacaggagtctggcgggctggggatcagtatc
aaaggtgggcgcgagaaccggatgcccatactcatctccaagatcttccccgggctcgca
gccgaccagagccgggctctccgggtgggcgacgcgatcctctcggtgaatgggaacgac
ctccgggaggcgacgcacgacctggcggtccaggcgctcaagaaggcggggaaagaagta
acgcttgaggtgaagtacatccgcgaggtttctccactcttcaagaagccgtccctggtg
gccgacctgccgtgggacggcgtccgcccacagtcgcccagctacagcggcagcgaggac
tccgggtcgcccaaacactgcggctcctcctcctccaaggacagaaaagtgatgagcctg
aagatgtgcttcatcagcaggaacctcaccatgcccgatctggagaacagactgttggag
ctgcactccccggacggccagcacacggtggtgctgcgctgcaaagacggacccaccgcc
aactcctggttcaccgccgtccacaccaacattgccgctctgctgccgcacaccctggct
cacatcaacgcctacctgggggcctcgtcttcggccgccgcgcacccccatctcaaacac
atcggctggctggccgaacaggtccatctggaaggtggacggcagcagtacaagccagtg
gtcatggcactgacggagaaggacatcctgctcttcgaatcggtgccgtggagcagagag
tcctggtccatgcctctgctcacacacccgctgctagccacaagactggttcattctggg
ggcacccggggttctcccgcccagggttcggacctggtgttcgccacccggacgggcaca
gggcggggcatcgagtcccacatcttccgagtggagacccactgggatctgtcgtcatgg
acacgagccctcgtgcagggggcacacgctgccgctgagctcatcaaagaagtctccatc
ggttgcacgttgaacaggcaggacgtccggctcacgctgcactacgagaagggcttcacg
gtgatgagggagccggtggacccagccgtgggcgccgtgctgtacagatacccctacgag
aagctcaagatgtccgccgatgacgggatacgcaacctctaccttgactttgggggtcca
gagggagagatggtgtttgacctccactcgggcccaaagccggtggtgttcgtgctccac
tccttcctgtcagccaagctcacccgaatgggccttctgacgtga
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