Cyclopterus lumpus (lumpfish): 117731731
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Entry
117731731 CDS
T09199
Name
(RefSeq) paired box protein Pax-6-like
KO
K08031
paired box protein 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117731731
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117731731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
117731731
NCBI-ProteinID:
XP_034389960
Ensembl:
ENSCLMG00005005240
LinkDB
All DBs
Position
6:24068186..24087164
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AA seq
434 aa
AA seq
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MPQKDFRSQTSWETGVASMMQNSHSGINQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATTEVVGKIAQYKRECPSIFAWE
IRDRLLAEGVCTNDNIPSVSSINRVLRNLVSDKQQMGTVGAEGMFDKLKMLNGQTTWGGR
SGWYAGTTLPTTGCQRLAGGGENTISVSSTGEDSEETQMRLQLKRKLQRNRTSFTQDQIE
ALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQVSNSSN
HIPISSSFNNSVYQPIPQPTTPVSFSSGSMLGRSDPVLSNSYSLPAMPSFSMAASLPMQA
SSQPSYSCMLPTSPTVNGRSYETYTPPHMQPHINSQSMTSSVPSSTGLISPGVSVPVQVP
GNEADMSQYWPRLQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaaagatttcaggagccaaacaagctgggagactggtgtggcctccatgatg
caaaacagtcacagtggaataaaccagctgggaggtgtgtttgtgaatgggagaccttta
cctgattctaccaggcagaagatagtggagctggcacacagtggagctcgaccttgtgac
atatccagaatactgcaggtgtcgaacggctgtgtgagtaagatcttgggccgatattac
gagacaggttcgatccgtcctcgggccataggagggagtaaacccagggtggccacaaca
gaggtggtggggaagattgctcagtacaagagggagtgtccgtccattttcgcctgggag
atcagagaccgactgctggcagagggagtctgcaccaacgacaatatacccagtgtttca
tcaataaatcgagtgctccggaacctggtcagtgataagcagcaaatgggcacagtggga
gctgaagggatgtttgacaaactcaagatgctcaatggacaaaccacctggggaggacgc
tcagggtggtacgctgggactacactccccaccactggttgccagaggctggcaggcgga
ggagagaacaccatatcagttagttccaccggtgaagactcagaggagactcagatgagg
cttcagctgaagaggaaactacagagaaacagaacgtcattcacacaggaccagatagaa
gcgctggagaaagaatttgaaaggactcactatccagatgtgtttgcccgagaacgcctt
gccaacaaaatagaccttccagaggcaagaatacaggtttggttttccaacagacgagca
aaatggagaagagaggagaagctaagaaatcaacgtcgtcaagtgtccaactcctccaac
catatccccatcagcagcagcttcaacaacagtgtttaccagccaataccacaacctact
acaccagtgtccttctcatcaggatccatgttgggaaggtcagatccagttctgtccaac
agctacagcctaccagccatgccaagcttcagtatggctgccagcctgcctatgcaagca
tccagccagccctcttattcctgcatgctgcccaccagccccactgtaaatggaagaagt
tatgagacatatactcctccacacatgcagccacacatcaacagccaatcaatgacgtcc
tctgtaccgtcgtcaacaggtctgatttcacctggtgtctcagttccggtccaagttcca
ggaaatgaagcggacatgtcacagtactggccacgcctccagtga
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