Cyclopterus lumpus (lumpfish): 117731742
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Entry
117731742 CDS
T09199
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03020
RNA polymerase
clum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117731742 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
117731742 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117731742 (polr2c)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117731742 (polr2c)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117731742 (polr2c)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117731742 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
117731742
NCBI-ProteinID:
XP_034389976
Ensembl:
ENSCLMG00005010788
UniProt:
A0A8C2XTB7
LinkDB
All DBs
Position
6:25565960..25569305
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVATIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDIILVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVFPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFFYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccatatgctaaccagccgacggtgaaaatcacagaactgacggacgagaatgtcaaa
ttcgtcattgagaacaccgacttggcggtggccaactccatccgccgtgtcttcatgtcg
gaagtcgccaccatagcaatcgactggatccagatcgatgccaattcgtcagtgctgcac
gatgagttcattgcacaccgagtcggtctcataccgctcacaagtgacgacatcgtggat
aaaatgcagtattctcgggactgcacctgtgatgatttttgtccggagtgttctgttgag
ttgacgctggacgttcgatgtaccgaggaccagacgcgccacgtcacctcacgcgacctt
ttgtccaacaatcccagagtcatcccggtgacttccaggagtcgagacaacgaccccaac
gactacgttgaacaagatgacattatactggtgaagcttcgtaagggtcaggagctgcgg
ctcagggcgtacgccaagaagggcttcggcaaggagcacgccaagtggaacccaacggcg
ggggtgtcctttgagtacgacccagacaacgcactgaggcacacggtcttcccccgaccc
gaagagtggcccaagagtgaatattccgagattgaggaggatgaggttcaggctccctac
gaccccaatggaaagccagaaaggttcttctacaacgtggagtcatgcggctcgctgcga
ccagagaccatcgtcatgtcggcgctggccgtcctcaagaagaagctcagtgacctgcag
actcagctgagccacgagatccagagcgacgtgctcactatcaactga
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