Cyclopterus lumpus (lumpfish): 117731788
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Entry
117731788 CDS
T09199
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117731788 (ppfibp2b)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117731788 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
FxsA
Filament
ERM_helical
DUF16
MerR_2
Motif
Other DBs
NCBI-GeneID:
117731788
NCBI-ProteinID:
XP_034390055
Ensembl:
ENSCLMG00005003777
LinkDB
All DBs
Position
6:23887195..23953466
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AA seq
1019 aa
AA seq
DB search
MFPAITMETEASHMLEAALEQMDDIIAGSKAAAVEFSNSRYDLASPVSAAPLQIVHLAED
LKLALELQPNQDERDGLRAQLPSETAQILIDWLQSGTVDLCSPANNETYQERLLRLEGDK
ESLVLQVSVLTDQVEAQGEKIRDLESCLEKHRKKLASTEKLLQQELKSRTSLESQKLDLM
DEVSSLKLKLASMEETHTNTPPQDTKDTKQNKAECVVNLISELQEQMCRFQEEIGTRIQE
KRALEEREAQQGQARGSQTQSFSPQAGLSGSDLRLSGSDARMHNGGQTVHDLLQEVKQLK
SRVEELEGEKGHYERKLRATKAKISELRQLVASKDGEIECLQTQLLARGSTANDNTERGL
GGGAKGRLFGPMEEETVKKICVMNERSLQCCSLYPSMDKCSPSYQEYQRLKVGMESLLAS
NEEKDRHIEELTILLGQYRKMREVMALTQGSSEEELSRGLRLGAITHKAKSDSVRSEMSS
RGSSPLMLSSSPYQRELDSSLQNLMDTSLVSPGEISSFIGFWPRCKLLSSSLEELQSGSF
QKNAHMELSMYQTLPGKLKGKKSELRAELNKQPDGENASPVHSQDQDYSLRHPEKLEECL
LSDQSHLSSGVDSGQQSPVSPENRKTHRGIKKFWGKIRRSQSGNPAQVHDPELGEFRRGG
FRATAGPRLAHLGNTRDLKLPFSKWSTEQVCGWLEEIGLGQYGILACHWVTDGDTLLSAT
LQDLEKELAMKNPLHRKKLQLAIKTFSNGQPEKSSELDYIWVNRWLDDIGLPQYKDQFNE
GRVDGQMLQYLAVNDLLFLKVTSQLHHLSIKCAIHVLHVNKFSSNCLKRRPSHENQFTPS
EVVQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLLMLEPRFNSDTLALLLNIPPQKTLL
RRHLTTNFNNLVGAQAHQEKREYTEAPGYTPLSITTKVKLKKLGLSNLTHLRRRRRPDES
RDYVCPIESSSSQSGQSVVNGVPVLPYAGFRGLSPILDREPARSRDQVGLDHSRADPSP
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccgccatcaccatggaaacggaggccagtcatatgctggaggctgcactggag
cagatggatgacatcattgcaggttcgaaagcagcagcggtggagttttctaacagcagg
tatgacctggcttctccagtcagcgctgctcctctgcagattgttcatttggctgaggat
ctcaaactggccctggagctccaacccaaccaggacgagagagacggcctcagagctcaa
ttaccttcggaaacagcacagatactcatagactggctacagagtggaactgtggacctg
tgttctccagccaacaatgaaacctaccaagaacgtctgctccgcctagaaggagacaag
gagtctctggtgcttcaggtgagcgttctgaccgaccaggtggaggcccagggagagaag
atcagggacctcgagagctgtttggagaagcacaggaaaaaactggcctccacagagaag
ctgttgcaacaggagttgaagagcaggacctctttggagtctcagaagctagacctgatg
gacgaggtgtcctccctcaagctgaagctggccagcatggaggagacacacaccaacaca
ccgccacaagacaccaaggacaccaagcagaacaaagccgagtgtgtggtaaatctcatc
agtgagctccaggagcagatgtgcaggtttcaggaggagatcggcactcgtatccaggag
aaacgggccctggaggagagggaggcccagcaggggcaggccagaggcagccaaacccag
agcttcagccctcaggctgggttatccggctcagacctgaggctgtctggctctgacgcc
cggatgcacaatggaggacagactgtacacgatttgctacaagaagtgaaacagctgaag
agcagagtagaagagctggagggagagaagggccactatgagaggaaactaagagccacc
aaggctaagatatcagagctgcggcagctcgtggcctccaaagacggtgagattgaatgt
ctgcagacccagctgctggccagaggcagcacagccaatgacaacacagagagaggtctg
ggaggcggggctaaaggaaggctctttgggcccatggaagaggaaacggtgaagaagatc
tgtgtaatgaatgaacggagcctccaatgctgttctctttatccatccatggataaatgc
tctcccagctaccaggaataccagaggctgaaggtggggatggagtctttgttggcttca
aatgaggaaaaggatcgacatatagaggagctgaccattctgcttggacagtacagaaaa
atgagggaagtcatggctctcacacaggggagtagtgaagaggagctgagtcgcggtcta
agactcggagccatcacacacaaagcaaaatctgattctgtcaggtcagagatgtcatct
agagggtcttctccactgatgctttcttcatctccctaccagagagaactggactccagt
ctccagaacttgatggacacttcgctggtgtctcctggcgaaataagctcctttattggc
ttttggcctcggtgcaagttgctgtccagcagtctggaagaactgcagagtggatcgttt
caaaagaatgctcacatggagctgagcatgtaccagactctgccggggaaactgaaaggt
aaaaagagcgagctgagagccgagctgaacaaacagccagatggagagaatgcatctcct
gtccacagccaggaccaggactacagtctcagacatccagagaagctggaggagtgtctt
ctgtcagaccagtcccacctgtcctctggagtggactcaggacagcagtcccctgtctca
ccagagaacaggaagactcacagaggcattaagaaattctgggggaagatccgtcgcagc
cagtcaggcaatcctgcccaggtccatgaccccgagctgggagagtttcggaggggaggc
ttcagagctacagctggaccgagactggcccatctagggaacacacgagacctgaagttg
cctttttctaagtggagcacagagcaggtgtgtggctggctcgaggaaattggactgggc
cagtatggcattcttgcttgccactgggtcaccgacggtgatactctactgtcggccacc
ctgcaagacctagagaaggaattggcgatgaagaacccgctccacaggaagaaactccag
ttagccatcaagacgttcagcaacgggcagcctgagaagtcttcagagcttgactacatc
tgggtcaatcgttggctcgatgacatcggactccctcaatacaaagaccagtttaatgaa
ggaagggttgatgggcagatgctgcagtacctcgctgtgaacgacttgttatttctaaaa
gtgaccagtcagctgcatcacctcagcatcaagtgtgccattcatgttctccatgtcaac
aagttcagctccaactgcctcaaacgcaggcccagccatgagaaccagttcacgcccagt
gaggtggtccagtggaccaaccaccgggtcatggagtggctgagatctgtggatctggcc
gagtacgcaccaaacttgaggggcagcggcgtgcacggagggctgctgatgctggagcct
cgctttaactcagacacgctggccctgctgctgaacatccctcctcagaaaacactgctg
agacgccacctcaccaccaacttcaacaacctagtgggagcacaggctcaccaggagaag
cgggagtacactgaggcaccggggtacaccccactcagcatcacaactaaagtcaagctg
aagaagttgggcctctctaacttgacccacctgaggaggaggaggcggccggatgaatcc
agagactacgtctgtccaatcgagtcgtcctcatctcagtcaggacagtctgtagtgaac
ggggtgccggtgctgccctacgccggcttcagaggcttgagtccgatcctggacagagag
cctgcccgctccagggaccaggtggggctcgaccacagcagagctgacccatctccatga
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