Cyclopterus lumpus (lumpfish): 117731792 Help Entry 117731792         CDS       T09199                                  Symbol nlrc5 Name (RefSeq) protein NLRC5 isoform X1   KO K22615   NLR family CARD domain containing 5 Organism clum  Cyclopterus lumpus (lumpfish) Brite KEGG Orthology (KO) [BR:clum00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:clum04054]     117731792 (nlrc5) Pattern recognition receptors [BR:clum04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    117731792 (nlrc5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  NACHT LRR_6 LRR_4 NLRC4_HD2 LRR_NXF1-5 Atypical_Card LRR_8 AAA_30 ABC_tran AAA_22 Motif Other DBs NCBI-GeneID:  117731792 NCBI-ProteinID:  XP_034390082 Ensembl:  ENSCLMG00005010855 LinkDB All DBs Position 6:complement(21672322..21711350) Genome browser AA seq 1919 aa AA seqDB search MDEGVDPEDENVNYVLAQESPELLHILRGQSPTVIMKLCQMMPSDACWNGNLASSSPSTA AVTEHIEAMLEYFRGANNADCRNFLQTLCLLCEDIPMHLESRLMSVAGYEKSVCEHFTSS VTDGKSSSLPSDQLIKRPRIDYWMQFIGEVMHLLHRRWERLSEHLMRQVQLENVWVGLRT ANRGRDRPDQTPGSANKGGKTPESDGDYGSMDSRVTLETFLQGFTGKVTVLLGPAGSGKT LLMSCLGQQWAHGLGPIPSSYLFVLLEFRQLNVLSRPLSLSELLFQHYVPINESDHKKEA IVDYLLSNPEQSCWVLDGYDEFHSKLAKQEVQREQLNPEKPLPVADLISGLLNRQLLPGC TVMVTCRLRDVLDLEGISDKVGQLLGWDCYEIKEYVDNFFGDKGHSAKRALGVQAAELLL SSRHLLAMSSLPALCNICCIYLEHLLLESTVPRRTQIPEERGRETRRKAGRKEIKGGGRG EEGSRGGSFVQREDQGGGSEDMMTTNCRNQLPLTQAQIPSTLTQVYLSVLDSFLSRDPDT RGSNDELNTMKLPHSILSQHRSELCELSQLSWNGLEDSKILFMEEDISQEVLEFSIRTGL FSQVELRLEDGMLVNSYCFTHLTLQEFLAALRIMTSDDVSDTQLKKRFSLRTRWTTKADQ RTVFTDSLYLFVCGLASPHCTAALVQLGGTGGQNWVQKRQSLVLKLLKNLCHSNTLTGPK ILELCHCVQESQDHQLAQQVVGARPTLELRNIQLLPNDIQALAFVVNSVRDSGIGLDFGA CTMESECLDVLPRCQYIHYLGFRRRMYGDKFAEKLSSILPKFTTLKKLEFCGASLTATGA ASLASALPSCPDITEINLSDNELKDDGIKHIADIFTKLPRLALVKLGRNHSSLKAVDYLI GKMSSFLNIQQVHADGLKELTVTFSQNSDLISHKTKSEPTICLLNQKWSKPNMQKLSESL ACCPALSVLDISGGRLDVETLRTLTRFLPKFNVTQKIVANDSCLTVEGLPILTALLSACP AVVELHIRLQSPVQVSIVFSGGREATNEVSKLLCLSCCGLLPTHLARVWRSLGSSPDLTL LDLSSNCLGNRGLRILLDFLPRLRSIQEINASNNGTGVERVGMLAVALCSHNNLTDIHIS DGDEEQVILKFCPDKRDGKQQKKMFRVNNSSLPPSDMTTLCRRLVQCRSHLELDLSHSSL SDKAIENLLKVLPKMTSLQRLNVSHSIASTTGALMLVRCLTVSQRVTSVELRPQTASFIQ FDSVKAEQASCRLTHCSLKGDNLQRLLEILQQGPQLSVLDLSSNQLGDEGVKHVVDCLQG LKITSYVNLSNNGLTQQGVMDVANTLCTCNNVTAVEVSLGAEERCLVWFTQYDGCVKTLS VRDSSLERAHLVRLAEIVSISPGPTKLEFKNNLLQSDWIEDFVTLLNRSQRGFSISIEER WIRSEEAVTLLCRCLDVSSNIHTIRVHHTTLHLSLMKSTELASHSDNSADLTPLMVTEKI SLMDCAVDGYYLASMKSIISRCPLLTELDFSHNNLGIEGAEFICSVLPSLPNLTSLSIGS KEASVTVVEKLSEALLQAAAIQCLNLSGHVISDTGAQILSRMLPRLRSLNLSHCEWSASA GLQLIKALRECVSLEGLCLDCWQLNEESRTCLAQALRKINSIRRLKLNKIATEIGPSQAN GVLDLLAAMEGLTQTQEIELEGWRMADRGIEELARVLPVWTELRKISLSKNLISDQSGDM LLEALHSCTHLEELHLPSNSLGDLTAARMAVVLPSLTHITVLDISENRIRYEGSVSLSKA IMCMKNLTKIYLTSVGTPELCPVAASLAHCPLLQDVGLGWNNCGDNVAVELVRVMPLCQR LTRIDLESNAVSVSGAEALARALESCPALQLIRLWRNKVSPSEARRLSLRERRLNFSST NT seq 5760 nt NT seq  +upstreamnt  +downstreamnt atggatgagggggttgatcctgaagatgaaaatgtgaactatgtcttggctcaggagtcc ccagaactgctccacatccttagaggtcagtcccccacagtcatcatgaaattgtgccaa atgatgcccagcgatgcttgttggaatggaaacttggcctccagtagtccctcgacagca gctgtaacagaacacatcgaagccatgttggagtacttcaggggggccaacaatgcagat tgccgcaacttcctccagaccctgtgtttactgtgcgaggacatccccatgcacctggag tctaggctcatgtcagtggctggatatgaaaaaagtgtttgtgaacatttcacttccagt gtaacggatgggaagtcgtcatcgctgccttcagaccagctcatcaagcgtccacggatt gattactggatgcagttcattggtgaagtgatgcatttactgcataggaggtgggagcgg ctcagtgagcacctgatgaggcaggtgcagctggagaatgtgtgggtcggcctaagaacg gcaaaccgaggcagggacagacctgatcaaactcctggatcagcaaacaaagggggcaaa acaccagagtctgatggggactatgggtctatggattccagagtgacattggagaccttc ctccagggttttacagggaaggtgacagttctccttggcccagcaggatcaggaaaaact ctgctgatgtcttgtttaggacaacagtgggcacatggactaggcccgatcccttcatct tacctgtttgtcctgctggagtttcgtcagctcaacgtactgtcccgtcctctctccctg tctgagctgctattccaacactacgtccccataaatgagagtgaccacaaaaaggaagcc attgtggattacctcctttccaatccagagcaaagctgttgggtgctggatggctatgac gagtttcacagcaaactcgccaaacaagaggtgcagagagagcaattgaacccagaaaag cctttgcctgttgcagacctcatatcagggctgttaaatcgtcagcttctcccaggatgt actgtgatggtcacttgtcgtctacgcgatgtcctcgatttggaaggcatttcagataaa gtcgggcagctgctgggttgggactgctatgagatcaaggagtatgtggacaactttttt ggcgataaaggtcactcagccaaaagggctcttggggtgcaggcagcagaactccttctt tccagtcgacacctactcgccatgtcatccctccctgccctctgcaacatctgctgcatc tatctggagcatttactgctggagagtacagtcccaagaaggacccagatacctgaagaa agaggaagagagacgaggagaaaagcgggtagaaaagaaataaaaggaggcggaagagga gaagagggcagtagaggagggagttttgtgcaaagggaagatcaaggcggagggagtgaa gacatgatgacaacaaactgtagaaaccagctacctctcacacaagcccagattccctcc accctcacccaggtctacctcagtgttcttgattcgtttctgagccgtgaccctgataca agaggaagcaatgacgagctgaataccatgaaacttccacacagtattctgagtcagcat cgatctgagttgtgcgagctcagtcagctgtcctggaacggcttagaggacagcaagatc ctcttcatggaagaagacatttctcaggaggttttggagttttcaatcaggacagggctc ttctcacaggtggagctcagacttgaggacgggatgcttgtcaactcctactgcttcact catctgactttacaggagtttttggctgcactcagaatcatgacgagtgatgatgttagt gacacgcagctcaagaagagattcagcctgagaactcgctggacaaccaaggcagaccag aggacagtctttacggactccctgtacctgtttgtatgtggtctggcctccccacactgt actgcagccttagttcaattaggtggaacaggaggtcaaaactgggtccaaaaacgacaa agccttgttctgaaactgctaaaaaacctttgtcacagcaacaccctgactggaccaaag atattggagctttgccactgtgttcaggagagccaggaccaccaactagctcagcaggtt gtgggtgcaagacccactttggagctgcgcaacatccagcttctaccaaatgatattcaa gctctagcttttgtagttaactcagtcagggatagtggcattggattggactttggagca tgcacaatggagtcggagtgtttagatgtcctgcccaggtgtcagtacattcactacctc ggttttcgcagacgcatgtatggcgacaagttcgctgagaagttgtcctccattttgcca aaattcacgaccctgaagaaactagagttctgtggtgccagtctgacggccactggagcg gctagtttggcctctgctctaccgagctgtccagacatcactgaaatcaacctcagtgac aacgaattgaaagacgatgggatcaaacacatagctgatatatttaccaaactaccaaga ctggctttggtgaagctgggtcgaaaccacagctctctgaaggcagtggactacctcatc gggaaaatgtcttcgttcttgaacatccagcaggttcatgcagacggattgaaggaattg acagtcactttctctcaaaactctgatttgatcagccataaaactaagtctgaaccgaca atctgcttgttgaaccagaaatggagcaagccgaatatgcaaaaactttcagagtcattg gcatgttgccctgccttgtctgtcctggatatttctggaggccgcttggatgttgaaact ctgaggacgctgactcggtttttgccgaagttcaacgtcacccaaaagattgttgcgaat gacagctgcttaacagtggagggtttgccgattctgacggctctgctgtctgcgtgtcct gctgtggtggagcttcatatcagactgcagagtcctgttcaggtgtccatcgtgttttct ggagggagagaagcaactaatgaagtatctaaactgctctgcctcagctgctgtggactg ctgccgactcatctggcgagagtgtggaggagtttgggatcctctcctgatctcactttg ctggatctgtccagtaactgcttaggcaacagaggtctgaggatactgttggacttcctg ccccgtcttcgtagcatccaggaaataaatgccagtaacaatgggactggcgtggagaga gtggggatgctggctgttgctttgtgctcccataacaacctcacagacatccacatcagt gatggagacgaagagcaggtgatcctcaagttctgccccgacaaaagggatggcaaacag cagaaaaagatgttcagggttaacaacagcagtctcccaccatccgatatgaccacactc tgtagacgattggtccagtgtcgctcccatttggagttagatttgtctcacagctcattg tcggacaaggccatcgagaatctgctgaaggtcctgcccaagatgacgtcactgcagaga ctcaatgtcagccacagcattgcatccacaactggagcactgatgctggtcagatgtttg actgtcagccagcgagtcacctcagtggagctcaggcctcagactgcatccttcatccag tttgacagtgtgaaagcagaacaagccagctgcaggttaactcattgtagcctgaaaggt gacaacttgcagagacttctggagatcctccagcagggtcctcaactgtctgtcctggat ttatcaagtaaccaactgggagatgagggagtgaagcatgttgtggattgtctacaaggg cttaaaatcaccagctatgtaaatttgagcaacaatggcctgacgcagcagggggtgatg gatgtggccaacacactgtgcacctgtaacaacgtcactgctgtagaagtcagtttggga gcagaggagaggtgtctcgtctggttcacgcaatatgacggttgtgtaaaaacgctgagt gtcagagacagtagtttggaacgtgctcatctggtcagactagcagagatcgtgtctatc agtcccggtccaaccaaactagagttcaagaacaatttgctgcagtcggattggattgaa gactttgtgacactgttaaaccgcagtcagagaggattcagcatcagtattgaggaacgt tggatcagatctgaggaagctgtgactttgttgtgccgctgtctggatgtcagcagcaac atacacactatcagggttcaccacaccacgctgcatctgtctttgatgaagtccactgaa ctggcctcacacagtgacaactctgcagatctgactccactaatggtcacagagaaaatc agcctcatggactgtgcagtagatgggtattaccttgcatctatgaagagcatcatctcg aggtgtcctttactgacagagctggatttttcccacaacaaccttggcatagagggagct gagtttatctgttctgtcctgccctcgctgccaaatctcacttctctgagtattggttcc aaagaggcttctgtgactgtggttgagaagctgtcagaggccctgctgcaggctgcagcc attcagtgcttaaatctgtccggtcatgtgattagtgacacaggagcccagattctgagc agaatgttgcctcgcctaagatcactcaatctgtctcactgtgagtggtcagcatctgca gggctgcagctcatcaaagcactgagagagtgtgtcagtctggagggcctttgtctggac tgctggcagctgaacgaggagagcaggacgtgcctggcacaagcactaaggaaaatcaac tctatacgcagactcaagctaaataagattgccacagaaataggaccatcacaagcaaac ggtgtgctcgatctcctagctgctatggagggactcacacaaactcaggagatagagttg gagggctggaggatggctgatagaggaatagaagagctggccagagtccttcctgtctgg acggagctcagaaagatcagtctatcaaagaaccttatcagcgaccagtcgggagacatg ctgctggaggctttgcacagctgtactcacctggaagagctccatctgcctagcaacagc ctcggggatctcactgctgccaggatggccgttgttctaccgtcactgacacacatcact gtgctggatatttccgagaacaggattagatatgaaggatcggtgagcctgtccaaagca ataatgtgcatgaagaacctcaccaagatctatctgacctccgtggggactccagagctg tgtcctgtagctgccagtctggcccactgtcccctcctacaggatgtgggcctgggatgg aataattgtggcgataacgtggcagtggagctggtcagagttatgcctctctgtcagagg ctgacgaggatagatctggagtcaaacgctgtgagtgtttctggagcggaggccctggct agagccttagagtcgtgtcccgcgctgcagctcatcaggctgtggaggaacaaggtctcc cccagtgaggcccggaggctcagtctgagggagaggaggctgaatttctcatccacctaa

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