KEGG   Cyclopterus lumpus (lumpfish): 117731801
Entry
117731801         CDS       T09199                                 
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
  KO
K10567  endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117731801 (neil1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clum03400]
    117731801 (neil1)
Enzymes [BR:clum01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     117731801 (neil1)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     117731801 (neil1)
SSDB
Motif
Pfam: Neil1-DNA_bind Fapy_DNA_glyco H2TH
Other DBs
NCBI-GeneID: 117731801
NCBI-ProteinID: XP_034390110
Ensembl: ENSCLMG00005001024
LinkDB
Position
6:11098608..11105694
AA seq 437 aa
MPLYSLQNSSICVNKMPEGPELHLASLYVNAMCAGVVFTGPVTKSEVSKSPDVPFTCEAY
RISATSRGKEVKLTLTPMKSDDSKNRVKPGQADQPMEIVFRFGMSGYFRFATEDELPKHA
HLRFHSKEKPCRVLSFVDTRRFGSWQPNGTWQPDRGPCIMFEYESFREKIVSHLSDRAFD
RPICEALLNQKYFNGIGNYLRAEILFRLNIPPFVPARTILEGLKSEDVFENKKAVNNEII
DTKTSDGSKQKQVEGEPGDLLRLCHTVPLEVVNLGGKGYDPQKADYSDFRAWLQCYFVDG
MQSIRDHNGRTMWFKGDPGPMRPKDSKAPKAKKRAEKEDDHDYTEKKKAVRSRSVNASKK
KNAIKRETVTNTPKKEKDAPSNETVSKRRREVNTPQQERGETARRKKNSSAEPTTVVLVA
GPQRRSERVTRQNSTHK
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgccactttattctttgcagaacagctcaatttgtgtgaacaaaatgccagagggacca
gagctccacctggccagcctttacgtcaacgcaatgtgtgcaggagtggtgttcactgga
ccggtcacaaaatctgaggtcagcaagagtcctgatgtgcccttcacctgtgaggcctat
cgcattagtgccacttccagagggaaggaagtgaaacttacgctgacgcccatgaagagt
gatgattcaaaaaacagagtgaagccaggacaagctgaccagcccatggagatagttttt
cgctttgggatgtcgggctatttccgcttcgccacagaggatgagctgcccaaacatgcc
catctgcgttttcactccaaagagaagccctgcagagtgctgagctttgtggatacccgc
aggtttggcagctggcaacccaatgggacgtggcagcctgacagagggccttgtatcatg
tttgagtacgaaagcttcagggagaagatagtgtcacacctgtctgaccgtgccttcgac
aggcccatctgtgaagctctgctcaatcagaagtacttcaacggtatcgggaactacctg
agggctgaaatccttttcaggttgaacatcccaccgtttgtgcccgccaggaccatattg
gaaggcctgaagtcagaagatgtatttgaaaacaagaaggctgtgaataatgagatcata
gacacaaagacctcagacggatctaaacagaaacaagtggaaggagagccgggtgacctg
ctccgactgtgtcacacagtaccgctagaggtggtgaacctaggtgggaagggctacgat
ccccagaaggcggactactctgactttagggcgtggctgcagtgttactttgtggatgga
atgcaatcgatacgggaccacaatggcagaactatgtggttcaaaggagatccaggcccc
atgagacctaaagattcaaaagcacccaaggccaaaaagagagcagagaaagaagacgac
cacgattacacagaaaagaaaaaggcggttaggagtcgctctgtaaacgcatcaaagaag
aagaacgcgatcaaacgggaaactgtgaccaacacaccaaagaaagaaaaggatgcaccc
tcaaatgaaacggtgtccaagagacgacgagaagtaaacacacctcaacaggaaagggga
gaaactgcacgtaggaagaaaaacagcagtgcagagccaacgacagtcgtccttgttgca
ggtccacagaggcgtagtgagagagtgaccaggcagaacagtacacacaaataa

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