Cyclopterus lumpus (lumpfish): 117731893
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Entry
117731893 CDS
T09199
Symbol
ptprja
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase eta
KO
K05698
receptor-type tyrosine-protein phosphatase eta [EC:
3.1.3.48
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117731893 (ptprja)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117731893 (ptprja)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117731893 (ptprja)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117731893 (ptprja)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117731893 (ptprja)
CD molecules [BR:
clum04090
]
Proteins
117731893 (ptprja)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Ig_DSCAM-DSCAML_C
PTP_tm
Ig_J
Pur_ac_phosph_N
PTP-SAK
Tc-R-P
IL17R_fnIII_D1
Y_phosphatase3
DSPc
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
117731893
NCBI-ProteinID:
XP_034390332
LinkDB
All DBs
Position
6:complement(17651035..17694706)
Genome browser
AA seq
2879 aa
AA seq
DB search
MKPALLSGVSLWTLAVFCAVLEISQAECVKSACEGNVIGTSTTTSTAVTFGSIANCTIFN
GNKSSENGSIGGLIPGASYQIFFECFNCCQEATTKPLAVTNLTDTNITASSISLKWSKPE
GNSSFYRVRWTDGDFDETTGASVMITGLTPGVKFSINVTAVADDGLTEGEKATLSLYTRP
GEIEEPSVSTNTSSISLNWTSPPGEVFKYRLEWHNGGALMTSHTSSTFSVLSGLIPGTNY
TISVIAVAGDNQTEGDPHTFTSVTKPAGVGNLTVGGFTTSSISLKWTKPEGNSFCYRVQW
TDRTHNWGVSVAETKINVTELTAGVLYSFSVIAVAGDNKTESEVSEIVHYTRPGEIEEPS
VSTNTSSISLNWTSPPGEVFKYRLEWHNGGALMTSHTSSTFSVLSGLIPGTNYTISVIAV
AGDNQTEGDPHTFTSVTKPEVVSNITVTKITTSSISLKWTKSEGNSSFYRVQWTDGNVTD
SANVTQTNITITKLTAGVQYEITVTAVADDGRTDGQSTTVSQYTKPAGVGNLTVGGFTTS
SISLKWTKPEGNSFCYRVQWTDRTHNWGVSVAETKINVTELTAGVLYSFSVIAVAGDNKT
ESEVSEIVHYTRPGEIEEPSVSTNTSSISLNWTSPPGEVFKYRLEWHNGGALMTSHTSST
FSVLSGLIPGTNYTISVIAVAGDNQTEGDPHTFTSVTKPEVVSNITVTKITTSSISLKWT
KPEGNSSFYRVQWTDGNVTVSANVTQTNITITKLTAGVQYEITVTAVADDGRTDGQSTTV
SQYTRPGEIEEPSVSTNTSSISLNWTSPPGEVFKYRLEWHNGGALMTGYTSSTFSVLSGL
IPGTNYTISVIAVAGDNQTEGDPHTFTSVTKPEVVSNITVTKITTSSISLKWTKPEGNSS
FYRVQWTDGNVTDSANVTQTNITITKLTAGVQYEITVTAVADDGRTDGQSTTVSQYTKPA
GVGNLTVGGFTTSSISLKWTKPEGNSFCYRVQWTDRTHNWGVSVAETKINVTELTAGVLY
SFSVIAVAGDNKTESEVSEIVHYTRPGEIEEPSVSTNTSSISLNWTSPPGEVFKYRLEWH
NGGALMTSHTSSTFSVLSGLIPGTNYTISVIAVAGDNQTEGDPHTFTSVTKPEVVSNITV
TKITTSSISLKWTKPEGNSSFYRVQWTDGNVTVSANVTQTNITITKLTAGVQYEITVTAV
ADDGRTDGQSTTVSQYTRPGEIEEPSVSTNTSSISLNWTSPPGEVFKYRLEWHNGGALMT
GYTSSTFSVLSGLIPGTNYTISVIAVAGDNQTEGDPHTFTSVTKPSVVRNLSIIDVTTSS
MFLTWTEPDGNATSYTVQWSLRNDTLSNTTTETSFTIDKLDPGVQYNVTVTAVAVYSLNK
GEGILKRSFTRPEKPDYIMVTAQGTNYLDISWNLPRGRADHYVVNISNEGHIDLYSNTTA
VTIALFTDLNPGDYFFITVTAVAGSFTNTSDQSSFATEPTPPGSIIIISQGTYSLHLKWA
TPALMEEAPDISYIITYQPEGGKVQNNSTWFNTTELSSLLSGTSYNITVETVGPHNLSST
AVHNSAFTLPEPVYHLTVGDVNTTSIQLTWLRPIDHKPSYSYLVIALQDAMVVQNESTKT
ENYTFFHLTPETSTLFHVFVVVAGVKSAVESIQSYTKPEAVSGLMAIVNTTTMSVSWTSA
VGQVVSYTVLLYRGSHLVANNTDLSNTTVNQLFQGLTPGVLYCVELLTKSGHFESRNSSV
CNATFPNPPGTIMVESQTVTSINFTWASPKDMDHDQYNFRVSSFNGAVVTGNNWYLLNNL
QSGSPNNISVVTVGVWNYESTAVTTENYTRPYPVTMLRQTEISTNAVTLEWEPPENKSHY
SYIVETTNGSFLQSEAVANQHKVITGLLSGSNYSFTVTTQTPDGTQSAPVTVFYCTRPYS
IARVESETLNTTAVLLVWTKPPEYKPEYTYLVLTTGCCSQIKTFAGEVAEISELTPGTNC
TFCVVVRAADGIEGKASCTSQYTKPEAVQPHISSLGYNSSILVSWNQPPGKVEHYKVYLN
STPPTLKELNSNITDFLFGNLSAGRRYTAVVTTCSGPFNASSGFITNATYPNPPGSISVW
MKTTSSIDISWNEAPLMAGAIFHYQLTDLSLQGEENNSTTNTTYTNHYFTSLLSGTSYNI
SIATVGAMGFKSEKVHINKVTTRPLSVNLLTVSSEDEGIAVMWDAPDDYQESYSYYLTWQ
STDGPISGRLIREHMYMLDNLDPGKQYNISVTTETFDETEGAPRWNSTCTKASPAKNLKC
YGPNSRNAKVILTCNMPNGQYSGFEVTVRDGESNTTHTCNHTVSNLRHDTQYFLNVTTQS
CGPPSTSVTRSCWTGITNPPIPENYESLVVLSNKEYNKFTLQIKTSLLNSINGPITHIGV
LVTDAAPGDISDSNEYVGKTHKQWQEKDTPVYMATVVENTFLSRSGGESHLNIEIGNKSK
WKGYTNGALEANGRYQYAIVLFTSLDLQXTTLVNGQNSLISITNFFPAAQLPQNPAVIGI
AVGVTLGIFCVLIIILIGFIIYWKRLSNKESPDIQIQSMRAKVSVAVRVEEYAAYYKKQR
ADSNCGFAEEFEDLKLVGTAQVKMNAQTLENKPKNRYNNVLPYDSSRVKLSIIHGSPYDD
YINANYMPGYNSRKEYIAAQGPLPTSVSEFWRMIWXKNVQTLVMLTRCIEQGRVKCEQYW
DHGTKHFENINVTTTSEAKLEDWTIREFHIKNVKTAETRSVHHFHFTAWPDHGVPQSTEL
LISFRHMVREHMDQYSRHSPTVVHCSAGVGRTGTFIAIDRLIFQIERENVVDLYGIVHDL
RMHRPLMVQTEDQYVFLNQCAMDIIRSRTGTNVDLIYQNSAALSIYENLDFFKSEFHDA
NT seq
8640 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgcgctgctctccggcgtctctctgtggactctcgcggtcttctgcgccgta
ctggagatctctcaagcagaatgtgtcaagagtgcttgtgaaggcaatgtcataggaaca
tcaacaacaacaagcacagcagtcacatttggatccatagctaactgcaccatcttcaat
gggaacaagtcctctgaaaatggttcgatcggtggtttgattcctggagcaagctatcaa
atcttctttgagtgttttaactgctgccaagaggccaccacgaagccactagcagtcacg
aacctcactgacactaatatcacggcttcctctatatctctgaagtggagtaaaccggag
gggaacagctctttctacagagtacggtggactgatggagactttgatgagacgactgga
gcatctgtgatgatcactggtctgactcctggggtcaagttcagcataaatgtcactgca
gtggcagatgatgggcttactgaaggagagaaagccactctttctctgtacacaagacct
ggtgaaattgaggaacctagtgtgtccacaaacacctcctccatctctctgaactggacc
tcacctccgggtgaggtgttcaagtacaggttggagtggcataatggtggagcgctgatg
acgagtcacaccagcagcaccttcagcgtgctatcaggcctcatccctggtaccaactac
acaatctcagtcattgccgtcgccggagacaatcagacggaaggagaccctcacacattc
acctcagtcacaaagccagctggagtcggaaacctcactgtcggtggattcacgacttcc
tctatatctctgaagtggactaaaccagagggaaacagcttttgctatagagtacagtgg
actgatagaacacataactggggtgtcagtgtcgctgaaactaaaataaacgtcactgag
ctgacggctggagtgctttacagtttctctgtcatagcagtggctggagataacaaaaca
gagagtgaagtgtctgagattgttcactatacaagacctggtgaaattgaggaacctagt
gtgtccacaaacacctcctccatctctctgaactggacctcacctccgggtgaggtgttc
aagtacaggttggagtggcataatggtggagcgctgatgacgagtcacaccagcagcacc
ttcagcgtgctatcaggcctcatccctggtaccaactacacaatctcagtcattgccgtc
gccggagacaatcagacggaaggagaccctcacacattcacctcagtcacaaagcctgaa
gtagtcagcaatatcacagtcactaagatcacaacttcctctatatctctgaaatggact
aaatcagagggaaacagctctttctacagagtacagtggactgatggaaatgtaactgac
agtgccaatgtgactcaaacaaatataaccattactaaactgactgctggtgtccagtat
gaaataactgttactgcagtggcagatgacggcagaactgacggacagagtaccactgtt
tctcaatacacaaagccagctggagtcggaaacctcactgtcggtggattcacgacttcc
tctatatctctgaagtggactaaaccagagggaaacagcttttgctatagagtacagtgg
actgatagaacacataactggggtgtcagtgtcgctgaaactaaaataaacgtcactgag
ctgacggctggagtgctttacagtttctctgtcatagcagtggctggagataacaaaaca
gagagtgaagtgtctgagattgttcactatacaagacctggtgaaattgaggaacctagt
gtgtccacaaacacctcctccatctctctgaactggacctcacctccgggtgaggtgttc
aagtacaggttggagtggcataatggtggagcgctgatgacgagtcacaccagcagcacc
ttcagcgtgctatcaggcctcatccctggtaccaactacacaatctcagtcattgccgtc
gccggagacaatcagacggaaggagaccctcacacattcacctcagtcacaaagcctgaa
gtagtcagcaatatcacagtcactaagatcacgacttcctctatatctctgaaatggact
aaaccagagggaaacagctctttctacagagtacagtggactgatggaaatgtaactgtt
agtgccaatgtgactcaaacaaatataaccattactaaactgactgctggtgtccagtat
gaaataactgttactgcagtggcagatgacggcagaactgacggacagagtaccactgtt
tctcaatacacaagacctggtgaaattgaggaacctagtgtgtccacaaacacctcctcc
atctctctgaactggacctcacctccgggtgaggtgttcaagtacaggttggagtggcat
aatggtggagcgctgatgaccggttacaccagcagcaccttcagcgtgctatcaggcctc
atccctggtaccaactacacaatctcagtcattgccgtcgccggagacaatcagacggaa
ggagaccctcacacattcacctcagtcacaaagcctgaagtagtcagcaatatcacagtc
actaagatcacgacttcctctatatctctgaaatggactaaaccagagggaaacagctct
ttctacagagtacagtggactgatggaaatgtaactgacagtgccaatgtgactcaaaca
aatataaccattactaaactgactgctggtgtccagtatgaaataactgttactgcagtg
gcagatgacggcagaactgacggacagagtaccactgtttctcaatacacaaagccagct
ggagtcggaaacctcactgtcggtggattcacgacttcctctatatctctgaagtggact
aaaccagagggaaacagcttttgctatagagtacagtggactgatagaacacataactgg
ggtgtcagtgtcgctgaaactaaaataaacgtcactgagctgacggctggagtgctttac
agtttctctgtcatagcagtggctggagataacaaaacagagagtgaagtgtctgagatt
gttcactatacaagacctggtgaaattgaggaacctagtgtgtccacaaacacctcctcc
atctctctgaactggacctcacctccgggtgaggtgttcaagtacaggttggagtggcat
aatggtggagcgctgatgacgagtcacaccagcagcaccttcagcgtgctatcaggcctc
atccctggtaccaactacacaatctcagtcattgccgtcgccggagacaatcagacggaa
ggagaccctcacacattcacctcagtcacaaagcctgaagtagtcagcaatatcacagtc
actaagatcacaacttcctctatatctctgaaatggactaaaccagagggaaacagctct
ttctacagagtacagtggactgatggaaatgtaactgttagtgccaatgtgactcaaaca
aatataaccattactaaactgactgctggtgtccagtatgaaataactgttactgcagtg
gcagatgacggcagaactgacggacagagtaccactgtttctcaatacacaagacctggt
gaaattgaggaacctagtgtgtccacaaacacctcctccatctctctgaactggacctca
cctccgggtgaggtgttcaagtacaggttggagtggcataatggtggagcgctgatgacc
ggttacaccagcagcaccttcagcgtgctatcaggcctcatccctggtaccaactacaca
atctcagtcattgccgtcgccggagacaatcagacggaaggagaccctcacacattcacc
tcagtcacaaaaccgtctgtggtcaggaatctctccatcattgatgtcacaacatcgtct
atgttcctgacctggactgaacctgatggcaatgctacctcttacacagttcagtggtct
ttaagaaatgacaccttgagtaacaccaccactgaaacctcttttaccatcgacaagttg
gaccccggagtccagtacaacgtcacagtgactgctgtagctgtatattccttaaacaaa
ggagaaggaatcttaaaaaggtctttcacaaggcctgaaaagcctgattacattatggtg
acagcacaaggaaccaattacctggacatcagctggaatttgcctcgtgggagggccgat
cactacgtggtgaacatctcaaatgagggacatattgatttgtatagcaacacaacagca
gtcaccatagccctctttactgatttaaatcctggagactattttttcatcactgtgacc
gccgtagctgggagcttcactaatacgtctgatcagtcttcatttgccactgagcccaca
cctccgggttccatcatcatcatcagtcagggaacatactcgcttcatcttaaatgggcg
actcctgctttgatggaggaagctccagacatcagctacattatcacctaccagccagag
ggtggcaaagtacaaaataacagcacctggttcaataccacagagctgtcctctcttttg
tctggaacgtcctacaatataactgtagaaacagttggaccccataatttgagtagcacg
gccgtccataattccgctttcaccttgcccgaaccagtgtaccacctcacagtgggggac
gtgaacacaacatccatccagctgacgtggctcagaccaattgatcacaagccttcctac
tcctacctggtgatagctctccaggacgccatggtggttcagaatgaatcgaccaagact
gaaaattacaccttcttccatctgaccccggaaacctctacacttttccatgtatttgtt
gttgtagcaggggtcaagtccgcagtggagagcatccaaagttacacaaagcctgaagca
gtttctggcctcatggccatagtaaacacaacgaccatgtcagttagctggacatcagca
gttggacaggtggtctcctacaccgtactgctgtacagaggcagtcacttggtggcaaac
aacacggacctgagcaacacgactgtgaaccaactgtttcagggcctgactccaggagtg
ctttactgtgtggaattgctcaccaaaagtggacattttgagagcagaaactcaagtgtt
tgcaacgcaacttttcccaaccctccaggcaccatcatggtggagtctcagactgtgacg
tccatcaacttcacctgggcctctccaaaggacatggaccatgatcagtacaacttccgt
gtgtccagctttaacggtgccgttgtgaccggaaacaactggtacctgctgaataacctc
cagtctggaagccccaacaatatctctgttgttactgttggtgtgtggaactatgagagc
actgccgtgactacagaaaactataccagaccatatcctgtcacaatgctgagacagaca
gaaatcagcacaaatgcggtgaccttggagtgggaaccgcccgagaacaaatctcactac
tcatatattgtagagaccacaaatggctcatttcttcaatctgaagcagtcgcaaaccaa
cacaaagtaatcactggacttctctccgggagcaactacagcttcaccgtcaccacacag
acaccagatggcactcagtcagctcctgtgacagtgttctactgtacacgtccatacagt
attgcacgggtggaatctgaaaccttaaacacaactgctgtacttctggtttggacgaaa
ccaccggagtacaagcctgaatacacatacctggttctgaccacaggctgttgctcccaa
atcaaaacctttgcaggagaagtggcagagatttctgagctcacccctgggaccaactgc
accttctgtgttgttgtcagggcagcggatggcatcgaggggaaagcgagctgcacctct
cagtacaccaagcctgaggcagtgcaaccacatatctccagcctgggctacaatagttca
atcctggtgtcatggaaccaacctcctgggaaagtggagcattataaggtttatcttaac
agcacgcccccgactttaaaggagctgaactctaacattaccgactttctgtttggcaac
ttgtccgctggaaggcgctacactgccgtggtaactacatgtagtggacccttcaatgcg
tcatctggctttattactaatgcaacttaccctaaccctcccgggtcgattagcgtctgg
atgaagacaaccagctccattgacatcagctggaacgaagcacctctgatggcaggtgca
atcttccactaccagttgacggacctatcactccagggagaagaaaacaacagtaccacc
aacaccacctacaccaatcattattttacctccctgctttctgggacttcctacaacatc
tccatagcaacagtgggtgcgatgggttttaagagtgagaaggttcatatcaacaaggtc
actacaagaccgttgagcgtgaaccttcttacggtttcttcagaagacgagggcatcgct
gtcatgtgggatgcacctgatgactaccaggaaagctatagttactatctgacctggcaa
agcacagatgggcccattagtggtagattaatacgagaacacatgtatatgcttgataac
ctggatcctggcaaacaatataacataagtgtcaccacagagacctttgatgaaaccgaa
ggtgctccaagatggaattctacctgcacaaaggcaagcccagcgaaaaacttgaaatgt
tacggtccaaacagcagaaacgctaaagtcatcctgacctgtaacatgcccaatggacaa
tactctggcttcgaggtcactgtaagggatggcgagagcaatacgacacacacctgtaat
cacactgtgtccaacctccgtcacgacactcaatactttctgaatgtgacgactcagagt
tgtggaccacccagcacctctgtgactcgttcctgctggacaggcatcacaaacccaccc
attccagagaactatgagtcacttgtggtgttgagcaacaaagaatacaacaagttcacc
cttcagatcaaaaccagcctgctgaacagcatcaatgggccaatcacacatatcggggtg
ctggtgacagatgctgcccctggagacatttctgactcaaatgagtatgtgggaaaaact
cataaacagtggcaggaaaaggataccccagtatacatggcaacagttgtagagaacacc
ttcctatcacgcagtggaggagagagccatctgaacatagaaataggaaacaaatccaaa
tggaagggctacactaatggtgctttggaggccaatggaagataccaatatgctattgtg
ttgttcaccagtctggatctgcaanngacgaccttagtgaatggtcaaaattcactgata
agtataaccaacttctttcctgctgctcaactcccacagaacccagctgtcattggcatt
gctgtcggagtaacattgggaattttttgcgttctcatcatcatcctcattggcttcatt
atctactggaaaaggttatccaacaaagaatcgccagacatccagattcaatccatgaga
gccaaagtaagtgtggctgtgagggtggaggagtatgcggcttactacaagaagcagaga
gcagactcaaactgtggctttgctgaagagtttgaggacctgaagcttgttggtacagct
caggtgaaaatgaacgctcagacattggagaacaaacccaagaaccgctacaacaacgtg
cttccttatgactcctctagggtgaaactctctattatccatggaagtccatatgatgac
tacatcaatgctaactacatgccgggttacaactccaggaaggaatatatcgctgctcag
ggtccgttgcccacctcagtcagcgagttctggaggatgatctggnagaagaacgtccag
actctggtcatgctgacacgctgtatcgaacagggacgagtgaaatgtgagcaatactgg
gatcatggcaccaagcactttgaaaacattaatgtgacaacaacctctgaagcaaaactt
gaagactggaccatcagggaatttcacataaaaaatgtaaaaacagcagagacacgttca
gtgcatcacttccacttcacagcgtggccagatcacggagtcccacagagcactgagctc
ctcatcagcttcagacacatggtcagagagcacatggaccaatactccagacactctcct
actgtggtccattgcagtgctggtgttggacgcacaggaaccttcattgccatcgaccgt
ttgatcttccagattgaaagggaaaatgttgtggacttgtacggcatcgtccacgatctg
cgcatgcaccggccccttatggtgcagacagaggaccagtacgtgttcttaaaccagtgt
gccatggacatcatcagatcaagaactggaaccaatgtagatctaatctaccagaacagt
gctgcactgtctatttacgagaacttagatttcttcaaaagcgagttccacgatgcatag
DBGET
integrated database retrieval system
