Cyclopterus lumpus (lumpfish): 117731960 Help Entry 117731960         CDS       T09199                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism clum  Cyclopterus lumpus (lumpfish) Brite KEGG Orthology (KO) [BR:clum00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:clum00535]     117731960    00536 Glycosaminoglycan binding proteins [BR:clum00536]     117731960    04091 Lectins [BR:clum04091]     117731960 Proteoglycans [BR:clum00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    117731960 Glycosaminoglycan binding proteins [BR:clum00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    117731960 Lectins [BR:clum04091]  C-Type lectins   Lecticans    117731960 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF Ig_3 I-set ig Ig_CD22 Motif Other DBs NCBI-GeneID:  117731960 NCBI-ProteinID:  XP_034390432 Ensembl:  ENSCLMG00005000485 LinkDB All DBs Position 6:complement(4993836..5009532) Genome browser AA seq 1537 aa AA seqDB search MTPLLLLCVSLPLISATVLFELENHDELDGTLRVSIPMEMPLRPLLGSKVVVPCYFQDNT VNDPGAPTLAPLSHRIKWTYVTKEKVKTILVASEGKVQVETEYLDRVTMINYPLVSTDAT LEITELRSKDSGTYRCEVMHGIEDNYDSVDIQVQGIVFHYRAISTRYTLNFEKAKAACIQ NSATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPRERCFGDKEDFPGVRTYGVRD VNETYDVYCFAEKLSGRVFYSMSVEKFSFYEAGDQCAKLGARLATTGELYLAWKDGMDVC NAGWLADRSVRYPINIARPQCGGGLLGVRTVYLFANQTGYPYPDTHYDAVCFQAGEDAGA VPLRTTPFPDIIRMTPSPGIYPTLTPSPGGEEIKRGGVDTFFPLAVPPSVTDVDAAMAPT GVVFHYRPITGRYSLTFVEAQQACQSVGAVIASSLQLQAAFEKGLHQCDAGWLRDQTVRY PIVSPRDNCHGNLPHLPGVRSYGLRPASEHYDVFCYVERLRGEVFFTSDYDSFSYEEAVQ HCQKLNTTLATTGQLFAAWNQGLDKCRPGWLLDRSVRYPITTPRSHCGGGQVGVHIIYAF PNQTGFPDEHSRYDAYCFKAEVPVVHFENETNVNLTILTVDVINKTTVIVDYFAPTVVTT GEYNETETHVNITEIEEFINKKTITTQGVAPTMRPILPPVHVDVSGSGSADHSASGEISG ESSTSGTSGDASGSGQNVIFSGSTDVFSGGQSSSGGPQEAEGGSAVILTSGELGSASGSG DGVDTQHSGFSVSGSGLSGSGDISGSGGDSVIIMVDGKMEEVSKTHQKITEQELGQGGIE TSGSFWESSTSGSGSMSGTGSGSGSGSASGSGGFSGISFVDHSAVDLTVQSSGEQEVSGY RPFMSGSGSGSGSGGFSGISFVDHSAVDLTVHSSGEQEVSGYHPFGSGSGSGSGSGSGGF SGISFVDHSAVDLTVQSSGEQEVSGYRPFMSGSGSGSGSGGFSGISFVDHSAVDLTVQSS GEQEVSGYRPFMSGSGSGSGSGGFSGISFVDHSAVDLTVQSSGEQEVSGYRPFGSGSGSG SGSGGFSGISFVDHSAVDLTVQPSGEQEVSGYRPFGSGFHSGFPSGFPSGASGSASGDFI LPRGDVIYLTDNGMMEVTVPPQVRHPEQGRGVVEVSGEGSGSGIHHEFSGTLDQSLHFSG SGAPDEKPKLSVTLAPGSKMTYEYISRLGHSGLGEENMESRAGPTVYAVTPDAAYASPTT APSVSLVTPAVVEQPEVVEDFVDPCDPNPCGSGSCSVQGELAVCQCPTGFTGEDCSTPVQ GCAEGWLEFMGSCYLHFSERDTWSEAEQRCQEVNAHLVSIGSQEEQQFVNSNGQDYQWIG LNDKAVQNEFRWTDGGPLSFENWRPNQPDNYFNSEEDCVVMIWHEGGQWNDVPCNYHLPF TCKTGPVMCRAPPKVEHGRPMGSGRERYPANSIVRYQCDAGYTQRHLPVIRCMPDGQWEE PQVECTEAGANSNRLHKRSLRRRSKGVSSQREPRKLH NT seq 4614 nt NT seq  +upstreamnt  +downstreamnt atgacccccctgcttctgctctgcgtgtccttgcccctcatctcggcaacagtattgttc gagcttgaaaaccacgacgaattggatggcacactgcgtgtcagcatcccgatggagatg cctctccgacctctgctgggcagcaaggtcgtggtgccctgttacttccaggacaacaca gtgaatgaccccggagccccgaccctcgccccgctctcccaccgcatcaaatggacctac gtcaccaaggagaaagtaaagaccatcctggtggcgtccgagggaaaagttcaagtggag accgagtatttggaccgggtgacgatgatcaactacccgctggtgtccaccgacgccacc ctggagataacagagctgaggtccaaagattctggcacctaccgctgcgaggtgatgcac ggcattgaggacaactacgactctgtggacatccaggttcagggtattgtgttccactac cgtgccatctccacccgctacaccctgaactttgagaaggcgaaggccgcctgcatccag aacagtgctaccatcgccactccagcccagctgcaggctgcctacgatgacggataccac cagtgcgatgccggatggctctctgatcagactgtcaggtaccccatccatgagccgcgg gagcgttgctttggagacaaggaggacttccccggcgtgagaacctatggtgtgagagat gtcaacgagacctacgacgtatactgttttgctgagaaactatcaggaagggtcttctac tccatgtctgtcgagaagtttagcttctatgaagcaggagatcagtgtgctaaactcggt gcccgactcgccaccaccggagagctttacttggcctggaaggatggcatggacgtgtgc aacgccggctggctggcggacaggagtgtacgctaccccatcaacattgccaggcctcag tgtggaggagggctcctgggagtgagaaccgtctacctgttcgccaaccagaccggatac ccctaccctgacactcactacgatgctgtctgcttccaagccggcgaagatgccggtgcc gtgcccttgaggaccacccctttcccagatatcatccgcatgacaccctcccctgggata tacccgacgctcaccccctcacccgggggagaggagatcaaacgtgggggagttgacacc tttttcccgctggcagtcccgcccagtgtgacagacgtagatgctgccatggctcccaca ggtgtggtgttccactaccgacccatcaccggccgctactctctgacctttgtggaggct cagcaggcctgccagagtgtcggggcggtcatcgccagctccctgcagctgcaggcggcc ttcgagaaaggcctccaccaatgcgatgctggctggctccgcgaccagactgtcaggtat cccatcgtgtcacccagagataactgtcacggtaatctgccacacctcccaggagtccgg tcctacggcctgagaccagcgagcgaacattacgatgtattttgttatgtggaacgtctg cgaggtgaggtcttcttcaccagtgactatgacagcttctcctatgaggaagctgtgcag cactgtcagaaactcaacaccaccttggccaccactggccagctgtttgctgcctggaac caagggcttgacaagtgccgtccaggctggttgttggaccgcagtgtccgctacccaatc acaacccccaggtcccactgtggaggcggtcaggtcggggtccacattatctacgcattc cccaaccagacaggatttcccgatgagcattcgcgctacgacgcctactgttttaaagct gaagttccagttgttcactttgaaaatgaaaccaatgtgaatctgacaatcctgacggtg gatgtcatcaacaagacgacagtcatagttgattactttgctcccacagttgtaaccact ggagaatacaatgaaactgaaacccatgtcaatattactgaaattgaggagtttatcaac aagaaaaccatcacaactcagggagttgctccaactatgagacccattttacctccagtc catgttgatgtgtccggctctggttcagctgatcattcagccagcggggagatctcaggg gagtccagcacctccggtaccagcggtgacgcatccggttcgggacagaacgtcatcttc agcggaagcactgacgtcttctccgggggtcagtcctcctctggaggcccgcaggaggcc gaggggggaagtgctgtcatcctcacatctggcgaactgggtagcgcatctggatctggg gacggggttgacactcaacactctggcttcagtgtatctggatcaggtttgagtggaagt ggggacatcagtggtagtggcggagactctgtcattatcatggtggatgggaagatggag gaggtgtcgaaaactcaccaaaaaatcactgagcaggagttaggtcagggaggcattgaa accagcgggtctttctgggaatcaagtacctccggatctggaagtatgtccggaaccggg tccgggtccggctctggctctgcctctggctccggtggattttctggcatctcatttgtc gaccacagtgccgttgacctgacagtccagtcatctggtgagcaggaggtgtctggatat cgccccttcatgtccggatccgggtccggctctggctccggtggattttctggcatctca tttgtcgaccacagtgccgttgacctgactgtccattcatctggtgagcaggaggtgtct ggatatcaccccttcgggtccgggtccgggtccggctctggctctggctccggtggattt tctggcatctcatttgtcgaccacagtgccgttgacctgacagtccagtcatctggtgag caggaggtgtctggatatcgccccttcatgtccggatccgggtccggctctggctccggt ggattttctggcatctcatttgtcgaccacagtgccgttgacctgacagtccagtcatct ggtgagcaggaggtgtctggatatcgccccttcatgtccggatccgggtccggctctggc tccggtggattttctggcatctcatttgtcgaccacagtgccgttgacctgacagtccag tcatctggtgagcaggaggtgtctggatatcgccccttcgggtccgggtccggctctggc tccggttccggtggattttctggcatctcatttgtcgaccacagtgccgttgacctgaca gtccagccatccggtgagcaggaggtgtctggatatcgccccttcggatccgggttccac agcggctttccaagtggttttccatctggtgcctcaggctctgcctctggagactttatc ctgcctcgtggtgatgtcatctacctaacagacaatggcatgatggaggtgaccgtaccg ccacaggtgcgccaccctgagcagggccgtggggtggtggaggtcagcggggaaggaagt gggtcagggatccatcatgaattcagtggcactttggaccaaagcttgcatttctcggga agcggagcccctgatgaaaaaccgaagctttctgtcaccttagcgcctggatcaaagatg acttacgagtacatttcccgtctcggccattcgggacttggggaggagaacatggaaagc cgtgcaggaccgacagtgtatgcggtgactccagatgcagcctacgccagcccaaccaca gcgccatcagtgtcattagtaacccctgctgtggtggagcagcctgaagtagtggaagac tttgtagacccctgtgatccgaacccctgcggttcaggatcctgttctgtgcagggagag ctcgctgtgtgtcagtgtcctactggtttcactggggaagattgctcaacacctgtgcag ggctgtgctgagggctggttggagttcatgggcagctgttacctccacttttctgagaga gatacctggtctgaggctgagcaacgctgtcaggaggtcaacgcccacctggttagcatc ggctcccaggaggagcagcagtttgtcaactccaatggccaggactaccagtggattgga ctcaatgacaaagctgtgcagaatgagttccgctggacagacggtggtcctctgtccttt gagaactggaggcccaaccagccagataactacttcaactcggaggaggactgcgtggtg atgatctggcacgagggcggacagtggaacgacgtgccctgcaactaccaccttcccttc acctgcaagaccggacctgtcatgtgcagagctccccccaaggtggaacacggcaggcca atgggcagcggcagagagcgctaccccgccaactctatagtccgctaccagtgtgacgca ggctacacgcagcgccacctgccggtcattcgctgcatgccggacggacagtgggaggag ccacaagtggaatgtacagaagccggtgccaacagcaacaggctacacaaaaggtccctc aggagaagaagtaaaggggtcagcagccaacgggaaccgaggaagctgcactga

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