Cyclopterus lumpus (lumpfish): 117732019
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Entry
117732019 CDS
T09199
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117732019
Cell adhesion molecules [BR:
clum04515
]
Cadherins
Cadherin related
117732019
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
117732019
NCBI-ProteinID:
XP_034390515
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All DBs
Position
6:13445901..13453148
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AA seq
828 aa
AA seq
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MAETPMEGVHWSLDGKDADWFFLDERSIRLNTSADKVLDREAQGPVLMAELSCYEDDALQ
SVYRIMVEILNENDNSPVFSEDMVHSLTISEQTQVNTVVFTVQATDADNDKIIYSIDPAS
PDAEYFKVDLPNSGEVILSKPLDYETKTLLTVTIHASEMSTAEHFNTSTNITINILDGDD
QYPQFMPCQLLFEDETSRICTSPVYTVNVTEGEEEVVLDFSPGPIHAVDGDRGLSSPLSY
AIISGDDDGRFLMDRETGEVKLIHVVGDRLTTPELHLQVMACQDDDPRKYSVASVLVRVL
AVNQFYPEFNLAEYQGFVISGKSAASLVNTYGSKALMLYVEDQDFNHGFNPMIRFTFSPR
SNHTEIYQITQEGLLIARTNQLQPKQKHILEVMARDQESGDAIFATVVVEVLSEGQSIPL
SPLGNSNPMSCTLGKALFLSMVFMAGLGCILSLVIWLKKKHKGKRNPLQRGCVAQGKHPN
VSLRWFQLVSHRSGMQHEEEVPKNNEEYGTCNPSFSFSDNSGIYTHQDIPSCRGPVLPRT
AAAPDTSFIPNESALNPVILNNNVFTPIKSSSCSPTLHPATVDERPTHIAPPEENLGSPT
DIYLDPTEALPNTSPSPATPEATSTPPFTCPDSQTTETTSNDDPEDPVTSPSSQCSVPCS
HTRIASAEIDKPFRKPRVKTPSYSPLLCSPLPKQKGTPPPTPEHAPLTAKRVHIDTSPLD
SPPVTPEQSMDLSTKVDQPFTSLDQIEQSEHPGGTSDAGSSSQDRRPSTNSGHTQDIRAA
GDVNDDGFLGDEDADKHSEDDDDELDPADEELLRVMARCNPIFITFNK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaccccaatggagggggttcactggagtctggatggaaaagatgctgattgg
ttctttttggacgaaagaagcatccggctgaacacatcagctgacaaggttcttgaccga
gaggctcagggtcctgttctaatggctgagttatcatgttatgaggacgacgcacttcag
agtgtgtacaggatcatggtggagattctcaatgagaatgataattcacctgtgttttca
gaagatatggtccattctcttaccatcagtgagcagactcaagtgaacactgtggtgttt
actgtccaggccacagatgcagataatgacaagatcatttactccattgacccggcatcg
ccggatgcagagtacttcaaggttgatctccccaacagtggagaggtgatactgtccaag
cctttagactatgagaccaaaaccctgcttacggtcaccatccatgcctctgaaatgagc
actgctgagcacttcaataccagcaccaacatcaccatcaacatcctggatggagatgac
cagtacccacagttcatgccctgccagctgcttttcgaggatgagaccagtcgcatctgc
accagccctgtgtacacagtcaatgtcacagagggggaagaggaggttgtcttggacttc
tctcctggtcccattcatgcagtggatggagacagaggacttagctctccacttagctat
gccattatctcaggagacgatgatggccgtttcctgatggacagagaaacgggggaggtg
aaactgattcacgtggttggagacagactcacaactccagagctgcatctacaggtcatg
gcatgtcaggacgacgaccccaggaagtattctgttgcttcagtgttggtccgagttctg
gcagtgaaccagttttatccagagtttaatttggctgaatatcaaggctttgtaatttct
ggaaagagcgctgcctctctggtcaatacttatggcagcaaagcactgatgttatatgta
gaagatcaagactttaaccatggcttcaatcccatgatccgcttcaccttcagtccgaga
tccaatcacacagaaatctaccaaatcacacaggagggtcttctgatcgccaggactaat
cagctacaaccaaaacagaaacacattctagaggtaatggctagagaccaggagtcggga
gatgccatttttgctactgtcgtggtggaggtgttgtctgaaggacaatcaatccctctt
agtccacttggaaattcaaatccgatgagctgcactttgggcaaagccttgtttctgagc
atggtgttcatggctggacttggatgtatcctgtctttggtgatatggctgaagaagaaa
cacaagggaaagcggaaccccctgcaaagaggctgtgtggctcaaggcaaacaccccaat
gtgagcttacggtggttccaactggtgagtcaccgtagcggcatgcagcacgaggaggag
gtccccaaaaacaatgaggaatatggaacatgtaacccttccttcagcttctcagacaat
tctggcatctacacccaccaagacatcccctcatgccgaggacctgttctacccagaacg
gcggctgcacccgacaccagcttcatccccaatgaaagtgctctcaaccctgtgatcttg
aacaataatgtgtttacaccaatcaaaagctcctcttgttcacccaccctacacccagcc
actgtggatgagcggcccacacatatagctccacctgaagaaaacctgggctcaccaact
gatatatatcttgaccctaccgaggcactacctaacaccagtcctagccctgcaacccct
gaggccacttccactccaccgttcacctgtcctgattcacaaactacagaaacaaccagc
aacgatgaccctgaggaccctgtcaccagcccctcctctcaatgcagtgttccatgcagt
catacgcgaattgcttcagctgaaatagacaaacctttccgcaaacctcgtgtgaagaca
ccctcgtattcacctttactgtgctcacccctccccaagcagaagggcacacccccacct
acccctgagcacgctcctttaacagccaagcgtgtacacatagatacatctccccttgat
tcacctcctgtaacaccagagcaatccatggatctaagcacaaaggtagaccaacctttc
acatcactggaccaaatagagcaatcagaacaccccggtgggacttcagacgccggcagt
tcgtctcaggacaggaggccctcgacaaactcgggacacacgcaggacatccgtgcggca
ggagatgtcaatgatgatggttttctaggagatgaagatgcagacaagcatagtgaggat
gacgatgatgagttagatccagccgatgaagagctgctgagagtgatggctcgttgtaat
cccatttttatcacatttaataagtga
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