Cyclopterus lumpus (lumpfish): 117732051
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Entry
117732051 CDS
T09199
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03320
PPAR signaling pathway
clum04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117732051 (pparab)
03320 PPAR signaling pathway
117732051 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117732051 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clum03310
]
117732051 (pparab)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117732051 (pparab)
Nuclear receptors [BR:
clum03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
117732051 (pparab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117732051
NCBI-ProteinID:
XP_034390550
Ensembl:
ENSCLMG00005017926
LinkDB
All DBs
Position
6:6733088..6744320
Genome browser
AA seq
303 aa
AA seq
DB search
MSHNAIRFGRMPQSEKLKLKAEMVTVDREVGDPQVADQKTLARQIYEAYLKNFNMNKAKA
RTILTGKTTTPPFVIHDMETLKLAEQTLVPKMVGSGGTLKDREAEVRIFHCCQCTSVETV
TELTEFAKSVPGFSSLDLNDQVTLLKYGVYEALFAMLASCMNKDGLLVAYGSGFITREFL
KSLRRPFSDMMEPKFQFAMKFNAMELDDSDLALFVAAIICCGDRPGLVNVEHIERMQESI
VQVLHLHLLANHPDNAFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYR
DMY
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacaacgccatccgctttggccgcatgccccagtcggagaagctcaagctgaag
gcggagatggttacggtggacagggaggtgggagacccccaggtggccgaccagaagacg
ctggcccggcagatttatgaggcctacctcaagaacttcaacatgaacaaggccaaggct
cgaaccatcctcaccggcaagaccaccacacctcctttcgtcatccacgacatggagacc
ctcaagctggccgagcagacgctggtgccaaagatggtgggctccgggggaactctcaag
gaccgcgaggcagaagttcggattttccactgctgccagtgcacgtcggtggaaaccgtc
accgagctcacggagtttgcaaagtccgtgcccgggttctcgagcctggacctcaacgac
caggtgaccctcttgaagtacggcgtgtacgaggccctcttcgccatgctcgcctcctgc
atgaacaaggacggcctcctcgtcgcctacggctcgggcttcatcacccgggagttcctc
aagagcctgcggcggccgttcagtgacatgatggagccaaagttccagttcgcgatgaag
tttaacgcgatggagctggacgacagtgacctggctctgttcgtggccgctatcatctgc
tgcggagaccgcccgggcctggtgaacgtggagcacattgagcgaatgcaggagagcatt
gtgcaggtgctacacctccatctgctggccaatcaccccgacaacgccttcctcttcccc
aagctgctgcagaagctggctgacctccggcagctggtcacggagcatgcccagctggtg
caggagatcaaaaagacggaagacacttcactgcacccgctcctgcaggagatctacaga
gacatgtactga
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