Cyclopterus lumpus (lumpfish): 117732056
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Entry
117732056 CDS
T09199
Symbol
pdcd2l
Name
(RefSeq) LOW QUALITY PROTEIN: programmed cell death protein 2-like
KO
K14801
pre-rRNA-processing protein TSR4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117732056 (pdcd2l)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117732056 (pdcd2l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
117732056
NCBI-ProteinID:
XP_034390557
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Position
6:1490848..1492672
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AA seq
389 aa
AA seq
DB search
MASPAHELTLVGLCDAEIDSQRHRSSFRTNKVGGLPDWPPGVFQKSPRCGRCGVPLAHVV
QVYCPLEASPYHRNLHLFACTRAACSGRSDCWKVLRSQCLEGEEERRTSCGPPPAQEAPR
SASEWCDTADDWGMEEKGVKEAAAPQTQADETDVSSRLQVLRLVDSDPVLRLVDSDPQQD
VPVLRLVDSDPQQDVPVLRLVDSDPQQDVPVLRAFFINVVEEADLCGEEDELQHARRLLR
EYERREGVAVGGPEGGEDGGGGGEKYEKTRARHGDAVFSRFMKKISLCPQQILRYCRGGK
PLFVSEPHGDAVAPPCGSCGGARTFELQLMPALVSLLRRRGGGEEAQLEFGTVLVYTCRS
SCWKSGPGPGPAVEEFCSVQPDPDQHLFK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccggctcacgagctcacgctggtcggtctgtgtgacgcagagatcgactct
cagcgacaccggtcctcgttccggaccaacaaggtcgggggtctcccggactggcccccg
ggcgtcttccagaagtctccccgctgcggccgctgcggggtcccgctggctcacgtggtg
caggtgtactgccccctggaggcctcgccttaccacaggaacctccacctgttcgcgtgc
acgcgcgcggcgtgcagcggcaggtcggactgttggaaggtgctgcgctctcagtgtctg
gagggggaggaggagaggcggacatcctgcgggcctcccccggctcaggaggctcctcgg
tcggcctctgagtggtgtgacaccgctgatgactgggggatggaggagaaaggagtgaag
gaggcagcagctcctcagacacaagctgacgagaccgatgtcagcagccggcttcaggtc
ctccgtctggtggactcggacccggtcctccgtctggtggactcggacccgcagcaggac
gtcccggtcctccgtctggtggactcggacccgcagcaggacgtcccggtcctccgtctg
gtggactcggacccgcagcaggacgtcccggtcctccgggcgttcttcatcaacgtggtg
gaggaggcggatctgtgcggggaggaagacgagctgcagcacgcccggcggctgctgagg
gagtacgagaggagggagggcgtggcggtgggagggccggagggcggcgaggacggcggc
ggggggggggagaagtacgagaagacgagagcgagacacggagacgccgtcttctcccgg
ttcatgaagaagatctcgctctgtcctcagcagatcctgcgctactgtcgcggcgggaag
ccgctcttcgtctccgagccgcacggcgacgcggtggcgccgccgtgcggctcctgcgga
ggagcccggacgttcgagctgcagctgatgccggcgctggtcagtctgctgaggaggagg
gggggcggggaggaggcccagctggagtttgggacggtgctggtttacacttgcaggagc
agctgctggaaatcgggaccgggaccgggaccggctgtggaggagttctgctcggttcag
ccggacccagaccagcatctctttaaatga
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