Cyclopterus lumpus (lumpfish): 117732110
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Entry
117732110 CDS
T09199
Symbol
fgd4a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4a isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117732110 (fgd4a)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
117732110 (fgd4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
PH_13
FYVE_2
RHG20_PH
IBR
HEF_HK
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117732110
NCBI-ProteinID:
XP_034390684
Ensembl:
ENSCLMG00005017576
LinkDB
All DBs
Position
6:19346354..19390972
Genome browser
AA seq
867 aa
AA seq
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MDCMAAGYKHAALEKKSEADCFQSRTADETCVAVKIEPSRALGSSPECEHSNPPSVHACL
SRASGGTTDRSGKGVNGRCSFGRPRLLSKPKVPHKPLHLQSPVTNVKSPLAHIQKAPLKP
GMEERGGGGGGGGGGGGGRGAVKREKVREIHSKVSDLIHRFEENSSSESKRDGSPLKHIS
KPSIGSPAHRARHRQTETAGTQENHSSAPTSPQDADKPPTNGTLVQMERDEEEGKVDNLE
ERTNDSVRVETDGLVNGDTEQTGDHSPPQTDRTATESPTEKEDSGTKIESEHGNEEGSPD
QKETNEQKLFKIASELLHTEKAYVARLNLLDQVFCAKLMEEANKGTFPVDVVKNIFSNIS
SINAFHSQFLLPDLEKRMGEWESTPRIGDILQKLTPFLKMYAEYVRNFDNAMELLKQWTD
RSPQFKATIQEIQSQEACGCLTLQHHMLEPVQRVPRYEMLLKDYLKKLPQDDPDRQNSEK
SLEIIATAATHSNSALRKSENLKKLMEIYEMLGEEEDIVNPSNEFIKEGHILKLAARNTS
AMERYLFLFNNMLLYCVPKFSLGGTKYTVRTRIGIDGMKVLETTNEDYPHTFQVSGKERT
LELQASSEQNKADWIKAFRKTIEIFQQKNESFKNALKDVEEVSNAELGKRAPRWIRDNEV
TMCMKCKESFNALTRRRHHCRACGYVVCWKCSDNKVALEYDGNKMNKVCRDCLSILSGET
RAEGKKKGILEIEAAQFTDSSIMCGFLQYCEKTKPWQKVWCVIPEKECLVLYLYGAPQDV
KAQCTIPLLGYSVDDSARPTDPPACFRLSQSKSIHNFAADTEELKQRWLKVIRVAVTGEV
PGYPLTNGGNANTMDNNNTQEAGTDTS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggactgcatggccgctggttacaaacacgctgccttggagaagaaaagcgaagctgac
tgtttccagtcccggaccgctgatgagacctgcgtggcggtgaaaattgaaccctccaga
gctctgggcagtagcccggagtgcgagcacagcaacccgcccagtgtgcacgcgtgtctg
agtcgagcgagcggtgggacgactgacaggagcggcaaaggggtcaatggaagatgctcg
ttcggcaggccccggctgctttctaaaccaaaagtgcctcataagccgctacatctccag
agcccggtgacgaatgtcaagtccccgctggcccacatccagaaagcaccactaaaaccg
ggcatggaggagagaggaggaggaggaggaggaggaggaggaggaggaggagggagagga
gctgtgaaacgagagaaagtcagggagatacactccaaagtctcagacctcatccaccgc
tttgaggagaacagcagcagcgagagcaagagagacggctcgccgctcaaacacatcagc
aagccgtccatcggcagcccggctcaccgcgcccgccacaggcagacggagaccgccggc
actcaggagaaccactcgtccgcacccacctcgccgcaggatgccgacaaaccgccgact
aacggaacgctagttcagatggagcgggacgaggaagagggcaaggtggataacctcgag
gagaggaccaatgacagtgtgagggtagagactgatgggctggtaaatggtgatacagaa
cagactggagatcattcacctccacaaacagaccggactgctacagaaagccccactgag
aaggaggacagtgggactaaaatagaaagtgagcatgggaacgaagaagggagccccgac
cagaaggagacaaatgaacagaagctgttcaagatcgccagtgagctgttgcacacagag
aaggcctacgtagcacggcttaacctgctggaccaggtattctgtgccaagctcatggag
gaggcaaataaagggacgttccctgtggacgtagtgaagaacatcttctccaacatcagc
tccatcaacgccttccacagccagtttctgcttccggatctggagaagcgcatgggagaa
tgggagtccactcctcgcatcggagacatcctgcagaaactcacacccttcctcaagatg
tacgcagagtacgtgaggaatttcgacaacgccatggagctgctgaaacagtggactgac
cggtcgcctcaattcaaggccaccattcaggagatacagagtcaagaggcttgtggctgc
ctgacgctccagcaccacatgttggagcccgtgcagagagtccctcgctatgagatgctg
cttaaagactatctgaagaagctgcctcaggacgaccctgaccgacaaaattcagagaaa
tcgttagaaattatcgccacagcagctacccactccaacagcgcccttcggaaatctgag
aatctgaagaagctgatggaaatatacgagatgctgggtgaggaggaagacattgtcaac
ccctctaacgagttcatcaaggagggccacatcctgaagctggcggccaggaacacctca
gccatggagcgatacctcttcctgttcaacaacatgctgctgtactgcgtgcccaaattc
agtctgggaggaacgaagtacacggtgaggacgcggattggcatcgacggcatgaaggtc
ctggaaacgaccaacgaggactaccctcacaccttccaagtgtccgggaaggagaggacg
ctggagctacaggccagctcggagcagaacaaggccgactggattaaggctttccggaag
accattgagatcttccagcagaaaaacgagtcgttcaagaacgcattgaaagacgtggag
gaagtgtcgaatgcagagctggggaagcgcgcccctcgctggatccgcgacaatgaagtg
acaatgtgtatgaagtgcaaggagtctttcaacgctctgacacggcggaggcaccactgc
agagcctgcggctatgtggtgtgctggaaatgttcagacaataaggttgcgcttgaatat
gatggcaacaagatgaacaaagtctgcagagactgcttgtccatcctgtctggagaaacg
agagccgagggcaagaagaagggcatcctggagatcgaggcggctcagttcacagacagc
agcatcatgtgcggcttcctgcagtactgtgagaagaccaaaccttggcagaaggtgtgg
tgcgtcatccccgagaaggagtgcctggtgctctatctgtacggcgctccgcaggacgtc
aaggcccagtgcactatccccctgctgggctactctgtggatgacagcgctcggcccaca
gacccccccgcctgcttccgcctctcccagtccaagtccatccacaactttgctgctgat
actgaggagctcaagcagcgctggctgaaagtgattcgagtggcggtgacgggagaggtg
cccggataccctctgaccaacgggggcaatgccaacacgatggacaacaacaacacacaa
gaagcgggtaccgatacctcataa
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