Cyclopterus lumpus (lumpfish): 117732122
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Entry
117732122 CDS
T09199
Symbol
scaper
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117732122 (scaper)
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117732122 (scaper)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
zf-met
Motif
Other DBs
NCBI-GeneID:
117732122
NCBI-ProteinID:
XP_034390723
Ensembl:
ENSCLMG00005006129
LinkDB
All DBs
Position
6:complement(11822250..11876820)
Genome browser
AA seq
1485 aa
AA seq
DB search
MSKDNRHDGRRRGAGQHRLGPRVSQGGDGRERSGSNSSGSSHGGGKSKNTSITALKASFQ
RSNSHDKVRKIVAEEGRAARNLIAWSVPLENKEEEAKSKSHSSGSSKSQRINSGQQRNKK
QNAENKGIAGVLLDKGPEKSPTKARQPRKVDLRARYWAFLFDNLRRAVDEIYVTCESDQS
VVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQNRPTSLAWEVRKMSPGRHVMPSP
SADRMVPSPGARRALNFGGPPPTLAAARLSHTGPSWADRVKCTQSIPSSSQPTTAPVEKL
CKKDAEGWETVQRGRTTKPRSAAIVAKVSPVLVDVTPNQDSVKSHLPPTEEQQLNPLSDK
DTNQKDAAQPVPVEPDPLEKVRCPGNGNMMEPPAESVQDSGQCVDAPCEDAPPPSQAPEP
PPSSATVPSTDITLSVQVPALALSPSPDLPQTDGLGALLAFGDSVAEGGASLGTATSAPG
QAETPVTAVKLESVLDPTELSTVVSVQCVQPQSMAEVLAKKEELADRLEKANEEAIASAI
AEEEQLTREIQAENNDLETDNESDFTASIGNGGCGVNIDWSDMLADYDAREPWRQSNSWG
DIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQLKAQQLRDKLREEKTLKLQ
KLLEREKEVRKWKEELLDQRRRMMDEKLLHAELKREVQLQAIVKKAQEEEAKVNEIAFIN
TLEAQNKRHDALAKLNEYEQRLNELQDERQRRQEEKQARDEAVQERKRVLEAERQARVEE
LLMRRKEQETRIEQQKHEKEKAREDAARERARDREERLAALSAAQQEAMEELQKKIQLKH
DESSRRHMEQIEQRKEKAAELSSGRHANTDYTPKLTPYERKKQCSLCCVVITSEVHLFSH
TKGKRHQQAVRDSSSIQGRELSDEEVEHLSLKKYIVDIVTDSSVSSESMKDGEERQKARK
KAKKLRARMNSRAKEYERSMAAKTQVPDSPYKAKLQRLVKDLLKQLQGQDSGQSTNNKVS
GLDRTLGEISRILEKQNNADQVAFQVGGGLSALEQILQVVAAASTPTAVHRIPLKSLCAA
INTYYLACSCCPPSCSYVLFSNKIALLMDLLLHQLTLYVPDEDKSIFGRSVNKQVFEGLT
TGLLQTIATILGSLWPHISESGQGENTWISSPDAKVKSTATESFNTRTQDLISYVVNMGL
IDKLYGCFLSIQGPVDEHPKMSAFLQQASALLHSMCKLCFVVTGRAPSIFDNKRQDPTGL
TALLRSTDLVGVVHTLYCILLHSFSPESSSQSQEPYGPGVIQVALQGIRFLNSFALLDLC
AFQSVLGAEGLSLAFRHIVSSLLWYCTQHSSEELLHEVIICVGYFTVNHMDNQVIVQSGR
QPSVLQKLCQLPFQYFSHPRLIRVLFPSLISACYNNSQNKVILQQEMSCVLLATFIQDCA
ANEKDSDNKIKPGVSQLLDYCELSNRFPRDQWDSALQFFLKKQEE
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagacaaccgccatgatggaagacggcgtggagctggtcagcaccgtctcggc
ccgagagttagccaaggtggtgacgggagggagaggtctgggagcaacagctcaggctct
tcgcatggaggaggcaaaagcaagaatacttccataaccgctttgaaggcatcctttcag
cgctccaacagccatgacaaggtgaggaagatcgttgctgaagaaggccgtgctgctcgt
aacctcattgcctggagtgtacctctggagaacaaagaggaggaagcaaagtccaaaagc
cactccagtggcagttccaagtcccagaggatcaactctggtcaacaaaggaataagaaa
cagaatgctgaaaataaaggcatcgctggtgtcttgttggacaaggggccagagaagagc
cccaccaaagccagacagccccgcaaggtggacctacgagcacgctactgggctttcctc
ttcgacaacctgcgtcgagctgtggacgagatttacgttacctgtgaatccgatcagagt
gtcgtagaatgcaaggaggtgttgatgatgttggacaactatgtacgggatttcaaagct
ctcatagactggatccaacttcaggagaagttggagaaaacagatgcccagaacaggccc
acgtctttagcctgggaggtgcgtaagatgtctccaggacgtcatgtgatgccaagtccc
tcggccgacagaatggttccttctccaggtgcacgtcgcgccctcaactttggtggtccc
ccacctacactagctgcagcccggctttcccacacaggccccagctgggcggaccgagtg
aagtgcactcagtccatcccgagctccagtcaaccaaccaccgcccctgttgaaaaactg
tgtaagaaggatgctgagggttgggagacggtccagagagggcgtactaccaagccccgc
tctgctgccattgttgccaaggtcagtcctgtcttggttgatgtcaccccaaaccaggac
agcgtcaagtcacatctgccaccaacggaagagcaacaactcaaccctctctcggacaag
gacacaaaccagaaggatgctgcgcagccagtccctgtggagcccgacccgctggagaaa
gtcagatgtccagggaacgggaacatgatggagcccccagcagagagtgtacaagactcg
gggcagtgtgtcgacgcaccctgtgaagacgcacctcccccttcccaagccccagagccc
cccccatcctcagccacagtcccatcaacagacattaccttatcagtccaagtccctgct
ctggccctctcaccgtccccagaccttccccagacggatgggctcggtgcactgttggcc
tttggggacagtgtggctgagggtggcgcgtcgctgggcacggccacatctgctccagga
caggctgagactcctgtgacagccgtgaaactggagagtgtgttggaccccacagagctt
tctactgtggtatctgtgcaatgtgttcagccacagtccatggccgaggtcctggccaaa
aaagaggagcttgccgaccgactggagaaagccaacgaggaggcgattgccagtgccatc
gctgaggaagagcagctgaccagagagattcaggctgagaacaatgacctggagactgac
aatgaaagtgactttactgctagcatcggcaacggcggttgtggtgtcaatatagattgg
agtgacatgctggcagattatgacgctcgtgagccatggcgtcagagtaactcatggggg
gacatagtcgaggaggaacctgctcggcctcctggacatggaatccacatgcacgagaaa
ttgtcctcaccgtcacgcaaaagaaccattgcagagtcaaagaagaaacatgaggagaaa
cagctgaaggcgcagcagctgagggacaaactccgggaggaaaagacgctcaaactgcag
aagctcttggagagggagaaagaggtgaggaagtggaaggaggagttgttggatcagcgt
cggaggatgatggacgaaaagctgttacacgcagagttaaagcgagaggttcagctccag
gcgattgtaaagaaggcccaagaagaggaggccaaggtgaatgaaatcgcattcatcaac
actctggaagcccaaaacaagaggcatgatgccctggccaagttaaatgagtatgagcaa
cgcctcaacgagctgcaggatgagagacagaggagacaggaggagaagcaggccagagat
gaggctgttcaggagcgtaaacgggtcctggaagcagagcggcaggcccgggtggaggag
ctgctgatgcggaggaaggagcaggagactcgtattgaacagcagaaacatgaaaaagag
aaagctcgagaagatgccgcacgggaaagggccagagatcgagaagagcgtctggctgct
cttagtgctgctcaacaggaggccatggaggagctgcagaaaaaaatacagctgaagcat
gatgagagcagccgcaggcatatggagcaaattgagcagaggaaggagaaggctgctgag
ctcagcagtggtcgacatgcaaacacagactacacccccaaactgaccccttatgagcgc
aagaaacagtgttccctgtgctgcgttgtgatcacctcagaggtgcacctgttcagccac
accaagggcaagaggcaccaacaggccgtgcgagacagtagcagcatccaaggacgggag
ctctcagatgaggaagtggagcatctttccttgaaaaaatacattgtggatatagtgacg
gacagctctgtgtcttctgagagcatgaaggatggagaagaaaggcagaaggcacggaag
aaagcgaagaagctccgcgccagaatgaactccagggcaaaggaatatgagaggtcaatg
gcagcaaagacacaggtccctgactccccatacaaggccaagttgcagcgcctggtgaag
gacctgttgaagcagctgcagggtcaagacagcggccagagcaccaacaacaaagtgtcc
ggtctggacagaactctgggagagatctctcgcatcttagagaaacagaacaatgcagac
caagtggccttccaagtaggcggcggcctgtcggctctggaacaaattctgcaggtcgtc
gctgcagcttccacacccactgcagttcatcgtattcctctcaaatccctgtgtgctgct
ataaatacctactacctggcatgttcctgctgcccccccagctgctcctatgtgctgttt
agcaacaaaatagcactcctcatggacttgctgctgcatcagctaacactgtatgtccca
gatgaagacaaatctatttttgggcgcagtgtgaacaaacaagtctttgagggtttgacg
acaggattgctgcagaccattgctaccatcctagggtctctgtggccgcatatctctgag
tctggacaaggggaaaacacatggatttcctccccagatgccaaggtcaagagcactgcc
acagagtccttcaacactcgcacacaagacctaatcagctatgtagtaaacatgggtttg
attgacaagctctacggatgcttcttgtcgatccaaggtcctgtagacgagcatcctaag
atgtctgctttcctgcagcaagcctcagctctgttgcacagcatgtgtaagctgtgtttt
gtcgtgaccggacgtgctcccagtatatttgacaataaacgccaggacccgactggattg
acggccctgctgcggtccacagacctggtgggagtggtgcacactctgtattgcatcctg
ctgcacagtttctcgccagagtcttcttcccagagtcaggaaccctacggccccggggtc
atccaggtggctttgcaaggcatccgcttcctcaacagttttgccctgcttgacctgtgc
gccttccagtctgttctaggagctgagggtctgtctctagctttccgacacattgtcagc
tccctgctctggtactgtacccagcattcctctgaagagcttctgcacgaagtcatcatc
tgtgtgggatactttactgttaaccacatggacaaccaggtgatagtgcagtctggccgc
cagcccagcgtgctgcagaaactgtgtcagctgcccttccagtacttcagccacccgcga
ctcatcagggtgctcttcccctccctcatctctgcctgctacaacaactcccaaaacaag
gtcatcctgcagcaggagatgagctgtgtcctgctggctacattcattcaggactgtgct
gcgaatgagaaagattcagacaacaaaataaagcccggagtttcccagctgctggattac
tgcgagttgtcaaaccgctttccaagagatcagtgggactcggcgctgcagttttttctc
aagaagcaggaagagtga
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