Cyclopterus lumpus (lumpfish): 117732132
Help
Entry
117732132 CDS
T09199
Symbol
yars2
Name
(RefSeq) tyrosine--tRNA ligase, mitochondrial
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117732132 (yars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117732132 (yars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117732132 (yars2)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117732132 (yars2)
Enzymes [BR:
clum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
117732132 (yars2)
Amino acid related enzymes [BR:
clum01007
]
Aminoacyl-tRNA synthetase
Class I (A)
117732132 (yars2)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117732132 (yars2)
Prokaryotic type
117732132 (yars2)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117732132 (yars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
Motif
Other DBs
NCBI-GeneID:
117732132
NCBI-ProteinID:
XP_034390737
Ensembl:
ENSCLMG00005017928
UniProt:
A0A8C3A767
LinkDB
All DBs
Position
6:6748803..6753706
Genome browser
AA seq
480 aa
AA seq
DB search
MAASMASTCCHVSRHGACILRGRTSLRLTLGCKLHCSSPALNGLLYSLNKRGVLKESFPE
DAAQDRLPRLLQSGAQTAYCGFDPTADSLHVGNLLAIVGLLHFRSAGHHVLAVLGGATAL
IGDPSGKTSEREPMSADAVEANTRSIRESIQRIFANHEVYVRDGSTKLGTLTVLNNLSWY
KNWGAVDFLSEAGRHFRMGTMLSRHSVQSRLKSADGMSLTEFTYQVFQAYDFHHLNQIYG
CKIQLGGTDQLGNLMSGHEYIHKVSGEEVYGLTVPLVTSSTGDKLGKTAGNAVWLNRDKT
SPFELYQFFLRQPDASVERYLKLFTFLPLAEVERLMEQQREDPGKRLAHKRLAAEVTKLV
HGKEGLESAKRCTNALYHDSVQALEEMSDDELQELFREAPFHELLLEPGTTVIDACRRVH
AIPQGPRGYQMVSDGAVWINHRRTDKPEQLLIPKLHILSNGLSLLRVGKRNFYIIKWLAL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccatggcgagtacctgctgtcacgtatcgcggcatggagcgtgtattctg
cgtggacgaacgagccttcgcctcacgctcgggtgtaaactgcactgttcttcgccggca
ctcaacggactgctctattctctgaataaacgcggtgttctgaaggagtctttcccggaa
gacgccgcgcaggaccggctccctcggttgctccagtccggcgctcagaccgcctactgc
ggcttcgaccccacggccgacagcctccacgtgggcaacctgctcgcgatcgtcggcctg
ctgcacttccggagcgccgggcaccacgtcctcgccgtgctcggaggggccacggcgctc
atcggggacccgagtgggaaaacgagcgagcgagagccgatgtctgcggacgccgtggag
gcgaacacccgcagcatccgggagagcatccagaggattttcgccaaccacgaggtgtac
gtgcgggacggttccacaaaactgggcacgttgactgtgctgaacaacctgagctggtac
aagaactggggggcggtggacttcctgtcggaggccggacgccacttcaggatgggcacc
atgctcagtcgccacagcgtgcagtcccggctgaagagcgcagacggtatgagcctcacc
gagttcacctaccaggtgttccaagcctatgacttccaccacctgaaccaaatatacggc
tgcaagattcagctcgggggcaccgaccagctgggcaatttgatgtctggccacgagtac
attcacaaagtgagcggggaggaggtgtacggcctcaccgtcccgctggtgaccagctcc
accggggacaagctggggaagacggccggcaacgcagtgtggctcaacagagacaagacc
tctccctttgagctctaccagttctttctcaggcagcctgacgccagtgtggaaaggtac
ctgaagctgttcaccttcctgcctctggccgaggtggagcggctgatggagcagcagagg
gaggacccggggaaacgcctcgcacacaaacggctggccgcagaggtgaccaaactggtg
cacggcaaggagggcctcgagagcgcaaagagatgtaccaacgcactgtaccacgacagc
gtgcaggccttggaggaaatgagtgatgatgagctccaggagctcttcagggaggcgccc
ttccacgagctgctgttggagccgggcaccactgtgattgacgcctgccgccgggtccac
gccatcccacagggacccagagggtatcagatggtttcagacggagccgtgtggatcaac
cacaggcggacggacaaacccgagcagctgctgatccccaaactgcatatcctgtcgaat
ggcctctccttgctccgagtgggcaagaggaacttctacatcatcaagtggctcgctctc
tga
DBGET
integrated database retrieval system
