Cyclopterus lumpus (lumpfish): 117732184
Help
Entry
117732184 CDS
T09199
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117732184 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117732184 (fanci)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
117732184 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
117732184
NCBI-ProteinID:
XP_034390814
Ensembl:
ENSCLMG00005022706
LinkDB
All DBs
Position
6:15789188..15799364
Genome browser
AA seq
1324 aa
AA seq
DB search
MDKIVMLSDGDCTAELQKYLSSLTSDQLTTVINSGSLKGKNAGAMIKGIFKGSPPDSTEG
SSRRLLVYQHCIPLCESGDLQTEVAADIIGLLMLETQTLPGPSLAKLASLFVEAIKVGKM
GSGKSLELFPTVLTALSACETLSYGEGELSGEEYKKQLINSLCSSRWDPQCVIHLTTMFR
DVPVSSEELQFVVEKVVRMFTKLDLQEIPPLVYQLLLLSAKGCKKQVLDGIVCYFKEQDV
CQEEEQKHGESLDLEVQSIPQDQLRHVEGTAILHIVFAIRLDHELGREFLKSFKTSYGDL
CPFSVALLLSVARIQRYEEQVFDLLKGAIIKSFKDEQLQQGSKFLQDLLPEHCSLARMIL
DTVKNSVFGWDHVTQGLVQLGFYLMDAFGPKPGPFGKTTEGSATIARTPNQQACKLGGQV
LLQGFKMHEPIRGEILDQVLNRLVTKTASPVNHYLDLFSDIVVSAPMILLESSSKVTETF
DHLSYLPLSTVQGLLKAIQPLLKVSMSLKDALILVLRKAMFSSQLDGRKSAVTGFLLLLK
NFKVLGSLASSQCSQAISSSQIQVDVHARYNSAANEAFCLEILSSLRRCLGQQADVRLML
YEGFYDVLRRNSQLASSIMQTLFSQLRRYYEPEQDLLPPVKLEPCITALGDQVYLQEPLA
HLLSCTVHCLLWLQNMRRSANPNTDDSGGEEEEEGEGYQSELQTILESMTRRMIKSELED
FELDKSAEFSTGSSVGVKNNIYAVLVMGVYEILMEYNFIKANYSKSCFEELLELFNRYHK
LAEILKEKCGKGRVPSNKSPRSLLSLGFISTLLAVLFRDSSQSREEALSVLRSSGEFVRY
AVNVAVQKTQQLEETGHTDGPDGQNTDRTFRFLCDMTSVLMWRYTNIPSVVEDAGKKEKR
SSLSLLCLEGLLRIFTTCQQRYPDRMAQLLSTMDISEDNNEPDDGNVTEMNFFYIRQFQR
ALFTQLSGGEEEFNSKEAQLLVSILSVLSRQLKPSSQQFVQMITWTVKLCKETSFEDPAF
AKGLLSLLFNLHVLYKSPVSLLLELCQDIHSQLGDIDQNVEVEKQSHFAIVNMKTATTGA
LLVLSQVDKVLDEVDWLIARKKSQPSSDKSGSGEATQTAGRQDPIEKAVMLQLGTLLTAL
NELVQTALLPGTCTITLLRELSRTYTILTTLVKYYIQVCASQQGALPARFEKLVKLSGSH
LTPQCYSFFSYAQSGEFSGGNADDKKKKKRNDVNTAPSAKLLRETKSIPNVIFSIEQYEK
YLITLSKKSKVNLMQYMKMSASRDFRINAVTLDAALQEQDESQGTNESQDAEEPKEPKQK
KRKQ
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatcgtcatgctgtcagatggtgactgtaccgccgaacttcagaagtacctt
tcctcgcttacaagtgaccagctaaccactgtgattaacagtggctcactgaagggcaag
aatgccggtgccatgattaaaggcatatttaaaggctccccacccgattccactgaaggg
tcaagccgcagacttcttgtttatcaacactgcatccctctgtgtgagtctggggatctt
cagactgaggtggcagctgatatcattggtctgctgatgctggagacccagacactaccc
ggaccctctcttgcaaaactggcgtctctttttgttgaagccattaaggtggggaaaatg
ggcagtgggaaatccctggagctatttcctactgtgctcactgccctttcagcatgtgaa
accttgtcttatggcgaaggtgaactcagtggcgaagaatacaagaaacagctgatcaac
agcctctgctcgagcagatgggatccacaatgtgtcatccacctgacaaccatgttcagg
gacgtgcctgtgtcatcagaggagctgcagtttgtggtggagaaagtagtgaggatgttc
accaagctggatctgcaggagatcccaccgctggtttatcaactgctgcttttatctgca
aagggttgtaagaaacaggtcctggacggaatcgtatgttattttaaggaacaagatgtt
tgccaggaagaggagcagaaacatggagagagcctggatctagaggttcagtccattcca
caggaccagctgagacatgtggagggcactgctatcctccacatagtctttgctatacga
ctcgaccacgaactcgggagagaatttcttaaaagcttcaagacgtcttatggggattta
tgcccttttagcgttgccctgttactctcagtcgcacgtatccagcggtatgaagagcag
gtgtttgaccttttgaagggggcaatcatcaagagcttcaaggatgagcagctgcagcag
gggtcaaagttcctgcaggacctcctgcctgagcactgcagtttggctcggatgatactg
gacacagtcaagaacagtgtgtttggttgggatcatgtgacccaggggctggtgcagctg
ggcttctaccttatggatgcattcggacccaaacctggaccatttggcaagaccacagaa
gggtctgctaccatagcccggacccccaatcagcaggcatgcaagctgggaggacaggtg
cttctgcagggctttaagatgcacgagcctatcagaggcgagatactggaccaggtcttg
aatcgattggtcacaaagacagcatcacctgtcaatcattacttagatcttttctctgac
atcgtggtttctgctcccatgatcctcttggagtcatcttctaaggtgacagagacattt
gaccacctgtcatacctgcctttgtccactgttcagggtctactaaaagctatccagccc
ttgctcaaagtcagcatgtccttgaaagatgctttgattttagttctccgcaaggccatg
ttttccagccaactggacgggaggaagtctgcagtgaccggcttcttgttgctgctgaag
aacttcaaagtgttgggcagcttggcctcaagccagtgcagccaggcaatctcctccagc
cagatccaagtggacgttcacgctcgctacaactcagctgccaatgaagcgttctgtctg
gagatcctcagcagcctgcgtcgctgcctcggccagcaggctgacgtacgcctcatgctc
tatgagggtttctatgatgtcctccgtcgcaactctcaacttgcaagctccatcatgcag
accctcttctcgcagctgaggcgatattacgaacctgaacaagacctgctgcccccggtg
aaactggaaccgtgcatcacagcgctcggagaccaagtctacctccaggagccactggcc
catctgctgagctgtactgtacattgcctgctgtggctgcagaacatgcggcgatcggcc
aaccccaacactgacgacagtgggggggaggaggaggaggagggggagggataccagtct
gaactacagacaatcctagagagcatgacaagacgcatgatcaagagtgaactggaggac
tttgagctggacaagtcagctgagttttccacaggatcaagtgttggggttaagaataat
atctacgctgtgctggtgatgggagtgtatgagatccttatggagtacaacttcatcaaa
gccaactacagtaaaagctgctttgaagagctcttggagctatttaaccgctaccacaaa
ctggctgagatcctgaaggagaaatgtggaaagggtcgagtgccttcaaacaagagtcct
cgcagtttactctcgttgggcttcatatcaactctcctcgctgtgctcttcagggacagc
agtcagagccgagaggaggctctctcagtgcttcgctctagtggagaatttgtgcgttac
gcagtaaatgtggctgtacagaagacccagcagctggaggaaactggacacacagatgga
cccgatgggcagaacacggacagaactttccgcttcctctgtgacatgacaagtgtgctg
atgtggcgttacaccaacatccccagtgtcgtggaggacgcggggaagaaggagaagcgc
tccagcttgtccctgctgtgtctggaaggtctgctcaggatcttcacaacttgtcagcag
cgctatccagacaggatggcccagctcctctccaccatggacatctccgaggacaataat
gagccagacgacggcaacgttacagagatgaacttcttttacatcagacagtttcagagg
gctctgttcacacagctgagtggaggtgaggaagaatttaacagcaaagaggctcagctg
ctggtcagcatcttgagtgtgctttcacgccagctaaagccctcctcccagcagtttgta
cagatgatcacgtggactgtgaaactgtgcaaggagaccagttttgaggatcctgctttc
gccaagggcctgctctctctgctcttcaacctgcatgttctctataagagtcctgtgagc
ctgttactggaactgtgccaagacatccacagccaactaggagatatcgatcagaatgtg
gaggtggaaaaacagtctcactttgccattgtcaacatgaagactgcaaccacaggagcg
ctgctggtcctgtctcaggttgacaaagtgcttgatgaagtggactggctgattgccaga
aagaaaagccagccatcctccgacaaatcgggttctggtgaggccacccagactgcaggc
cgacaggatccaatagagaaagcagtgatgctgcagctcgggactcttttgacggcttta
aatgagctggtccagacggcgctgctgcccggcacctgcaccatcacactgctgagagaa
ctgagtcgcacatacaccatcctcaccacgctggtcaaatattacatccaggtgtgcgcc
agccagcaaggagcactgccagcacgctttgagaagctggtcaaactgtcgggctcccac
ctaacgccacagtgctactccttcttctcatacgcacagagtggagaattcagtggtgga
aatgcagatgacaagaagaaaaagaaaagaaatgacgtgaacactgctccctctgcaaag
cttctgcgtgagacaaaatccatccccaacgtgatcttcagtattgagcagtatgaaaaa
tacctcatcacactctcaaagaaatcaaaggtaaacctgatgcagtacatgaagatgagc
gcatcaagagatttccgcatcaacgctgtcacactggacgcagccctgcaggagcaggat
gagagtcaggggaccaatgagtcgcaggatgcagaggagccaaaagaacccaaacagaag
aagagaaaacagtga
DBGET
integrated database retrieval system
