Cyclopterus lumpus (lumpfish): 117732196
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Entry
117732196 CDS
T09199
Symbol
ankrd27
Name
(RefSeq) LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 27
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117732196 (ankrd27)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117732196 (ankrd27)
Others
Specific organelles associated proteins
Melanosome
117732196 (ankrd27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
VPS9
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
117732196
NCBI-ProteinID:
XP_034390842
LinkDB
All DBs
Position
6:complement(2089430..2106925)
Genome browser
AA seq
1093 aa
AA seq
DB search
MAVYDENILKNVFFLALEKQRPDLCSRVAELHGIVLVPCCGSLTVSGYSDSQFDSYVLQP
AEDGYQTVDGKEVRIQDRQVLLGSGFPSPSSVPILFEETFYNDREQSYSILCISRPVEEE
EPSPAAAGPPPPPHRLRSLEDVRGFLGRHGQKLDKFILGFGQAFREQERKGLRHHIDSVN
GLYTKCLQCLLRDSRLKLLAKQELQMTLLKQAVEMYVHHGIHDLIFNFVGTLEASQDAAF
NKTTRSLQELQQSELGVKPEFSLNLSRAKRELSQLNLQTSPLLKLLCLRRVALTATQTPR
GAVNIEAVCADDLLSVVLYLLVKTEIPNWMANLSYIRNFCFSHSGKDELSYCLSTFEAAV
AYIKLGKLQETRSGSGELSDKALFKERMSLLPQSAATPIHLLFEHIANGNEVEVQRLLSE
GENEDVRMCHPLCSCDLCDLTLSGRLNDPSVVTPFSRDDRGYTPLHAAAICGQAKLIDLL
VSKGAPVNATDYHALTPLHLACQRGYQGVTLLLLHYKADPDAQDNNGNAALHLACMYGHE
DCVKALVYYDARTCRLDLQNDKGDAALHVAARWGYEGVIQVLLENGASTGVLNRSKDSPL
RCALNSKILVLLQSTQNGRQRSGVESPSRSPLASDCSSRRSSVSSTSSVGSEVKPEVERV
RRREVEKLLRAVADGDVEMVRYLLEWMDEEEEEEEEEEAEEDDEQERLLRPEAPLCHPLC
QCPACAPSQKLSVLQAGALSVNSCNAGGFTPLHVAALHGRSALAALLIRHGANANARTDQ
SATPLHLASQNSHVQVVRFLLECNAKLNKKDHYGNTPLIQACLCGNLETATTLLQSGALL
NVVNLQGNTALHESVRGGHQLLVELLLRGGASAGIRNKRQRTPLDCAYELGGKNTEILRA
LQKASGLSPDAEPIKLLSVPKGALAHSFVQHLKLQDHNSGRRQKLAQSISRVQQMKKGSS
APPSRCSTNLNQVNPDRRRLRRGETLEVSCPSASASRLRERPLSRCRTLDSGDDDARART
SSETRSGSPPSRAPSPADDPSEPRPAEADGPSPVAPSGESVSPDDRTESEDRAGSSPDWR
DAERTPETTGETS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtatgatgagaacatcctgaagaacgtcttcttcctggcgctggagaagcag
agaccggacctctgcagccgagtggcggagctccacggcatcgttctggtgccgtgttgt
gggagtttgaccgtcagcggctactcggactctcagttcgacagctacgtcctccagccg
gcggaggacggctaccagactgtggacggaaaggaggtccggatccaggacaggcaggtc
ctgctggggtccggcttcccgtctccgtcctcggtgcccatcctgttcgaggagaccttc
tacaacgaccgggagcagagctacagcatcctgtgcatctcgcggcccgtggaggaggag
gagccgagcccggccgccgccggcccgccgccgcccccccaccgcctgaggagcctggag
gacgtccggggcttcctggggcgccacggacagaagctggacaagttcatcctgggcttc
ggccaggccttcagggagcaggagaggaaggggctccggcaccacatcgactcggtgaac
ggtctttacactaaatgtcttcagtgtctgctgagagactcccgtctgaagcttctggcg
aagcaggagctccagatgactctcctcaagcaggcggtggagatgtatgttcatcatggc
atccatgatttaatttttaactttgtgggaacgcttgaagccagccaggacgccgccttc
aacaaaaccaccaggagcctgcaggagctgcagcagagcgagctgggagtgaagccggag
ttcagtttaaacttgtcccgggcgaagagagagctgagtcagctcaacctgcagacctcc
cccctcctcaaactgctctgcctgcgtagagtcgccctgaccgccacccagacgccgcgg
ggcgccgtcaacatcgaggccgtgtgtgcagacgacctgctctccgtggtcctctacctg
ctggtgaagacggagatccccaactggatggccaacctgagctacatccgtaacttctgc
ttcagccactccggcaaagacgagctgagctactgtctgagcaccttcgaggccgcggtg
gcctacatcaagctggggaagctgcaggagacccgctcgggctccggggagctgagcgac
aaggcgctgttcaaggagaggatgagtctgctgcctcagagcgcggccacgcccatccac
cttctgtttgagcacattgccaatggaaacgaggtggaggtgcagcgcctgctgagtgaa
ggagagaacgaggacgtcaggatgtgtcatcccctctgctcgtgtgacctctgtgacctc
acgctgtctgggcgcttgaacgacccgtccgtcgtcacgccgttctccagagacgaccgc
ggctacacgccgctacacgccgctgccatctgcggtcaggccaagctgatcgacctgctg
gtgagcaaaggagcgccggtcaacgccaccgactaccacgccctcacgccgctgcacctg
gcctgccagaggggataccagggagtcacgctgctgctgctgcactacaaggccgacccg
gacgcccaggacaacaacggcaacgcggcgctgcacctggcgtgcatgtacgggcacgag
gactgcgtgaaggccttggtgtactacgacgcgcggacgtgccgcctggacctgcagaac
gacaagggtgacgcggcgctgcacgtggcggcgcgctggggctacgagggcgtcatccag
gtgctgctggagaacggggcgagcaccggcgtcctcaacaggagcaaggactcgccgctg
cggtgcgcgctcaactccaagatcctcgtgttgttgcagtcgacgcagaacggacgccag
cgcagcggagtagaatctcccagtcgatcccctctggcttcagactgcagcagccgtcgc
tcctccgtctccagcacctcgtccgtgggctctgaggtcaaaccggaggtagaacgcgtc
cgacgcagagaggtggagaagctgctgcgtgccgtggccgacggcgacgtggagatggtg
cgttacctgttggagtggatggatgaggaagaggaggaggaagaggaagaagaggcggag
gaggatgacgagcaggaaaggcttcttcggcctgaggctccgctgtgccacccgctgtgc
cagtgtccggcctgcgctcccagtcagaagctgtccgtcctacaggccggggccctcagc
gtgaacagctgcaacgccggcggtttcacgccgctgcacgtcgccgccctgcacggccgc
tccgcgctcgccgccctgctgatccgccacggcgccaacgccaacgcccgcaccgaccag
agcgccaccccgctccacctggccagccagaacagccacgtccaggtggtaagatttctg
ctcgagtgcaacgccaaactgaacaagaaggatcactatggcaacacacctctaatacag
gcctgtctctgtgggaacctggagacggccacgacgttgttacagagcggtgcgctgctg
aacgtggtgaaccttcaggggaacacggcgctccacgagtcggtgcgcggcggacaccag
ttactggtggagctgctgctgaggggcggagcctcggccggcatcaggaacaagaggcag
aggacgccgctagactgcgcctacgagctgggtggcaagaacacagagatcctgagagct
ctgcagaaagcgtccggactttctcccgacgccgaaccaatcaaactcctgtctgtgccc
aaaggagctctggctcattcgttcgtgcagcacctgaagctgcaggatcacaacagtggc
aggaggcagaagctggcccagtccatcagcagggttcagcagatgaagaaaggttcctct
gctccgccctccaggtgttcaaccaacctgaaccaggtgaatcccgacaggaggcgtttg
aggcgaggtgagacgttggaggtcagctgcccctcagcgagcgcctcccggctgagggag
cgtcctctgagtcgctgtcgcacgctggactccggagacgacgacgctcgcgctcggacg
tccagcgaaacgcgctccggctcgccgccctctcgagcgccgtcgcccgccgacgacccg
tccgaaccgcgtcccgccgaggccgacggcccgagtcccgtcgctccgagcggcgagtcg
gtgtcgcccgacgaccggacggagagcgaggaccgggcgggctcgagtcccgattggaga
gacgccgaacggacgccagagacgaccggggagacgtcgtga
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