Cyclopterus lumpus (lumpfish): 117732245
Help
Entry
117732245 CDS
T09199
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117732245 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117732245 (tubgcp6)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
117732245 (tubgcp6)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117732245 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
Anti-LPS-SCYG
Motif
Other DBs
NCBI-GeneID:
117732245
NCBI-ProteinID:
XP_034390936
LinkDB
All DBs
Position
6:7342086..7365023
Genome browser
AA seq
1873 aa
AA seq
DB search
MYSSPNNHMKCSSSSITELLGALCDCSLSGVSWKRRALGGVSREGFRRALKKCAYGSLLS
KLFQDDTKGSTSGASATANTPAKNKVLMICFDLRVAGCREEAEKLEEQLGMLLEGASSGL
KEIDAVIELLVHLAGSAPPPPTSFSRDYMRRERPVLRRPRPWGYQSEELQRLEARAWGLV
CGEEWGTLESLCGTQRLMDAPPGTGLLAMRTKLEAEERFERDTRMTLFGALQHSRTSDID
IRLDLPPVPSNIDVTGLSIRVPSCLDQSEDEGFQSASNMTPDSQSETSPIPDVDIWEALR
TFEPGRRRCWESVGCPPGKRESLYLTEGGREAFDQLYRLWEGEMRVVSTATPSPLLPLPL
DSQAQLVFDLLNVLIGVASTTFPLNQSVQFDVRPGVCVSGASPESVCRLLGELALHGTHY
LRLSRFSLQSADKKGLVFQAFTGGMRKYLHYYRACVLSTPPTLSLLTIGFLFRKVGRQLR
YLSELCCVDGPLGAGQATFPVGVKLLSYLYNEAQNNCSNENYPVLLSLLKSSCEPYTRFV
SDWVYSGVFRDVYGEFMIQVNEDYLGSRDKHFWVQGYTLISKDVEDCVPIFLGHIGNDVY
VCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRMERVAKHSAI
SREEQAQRVEDARQELINQVRESAVKTLESIRGRQVSLRLADEAKKRERFDELKQQLEQE
QEWHSVAKKRQEEDDFGFARELRDREKRLQALEQQLEERARKELIAQYSRLSEEAARRER
RAMWQVQRMRLDEARAQFFMHDTQQTQAMLNKYPLGQERPPMEVLPPVPSAPQTAPQPTL
EPPSQDPSEQRLAETQECDAVSPPPDPSLLTLPADPVLISEDINIKRVDLALQEISSDLP
EVCPTAQLVDYDFSAPFSPLEGITGQALIQPRPCRGSAVQPDLIRNHPSFSHIPIGENMS
QFQDGFPKASPFGQASKSSFPLGQFTAEEPQNTFKASSYGHPSQATVQLTDESGSMAKNK
QMEVASMIEPVIEMGNLERTVEGNDGTGKSVKAAKNDDVVDSPSTTPEQSGEDNGVCCVG
IDPLDANTKPSTQDHSSDVQVKAGDNISLTNIHVSSAHLKAGEPASDAVAQQPSSSIHGQ
FSEAHLNVRQLASEVTDPLPSPNVHGHASDSHIKIGEHISEVGAPLPSASVHGHSSDAHI
KVGENVAEFVAPLPSQNVHGHASDAHIKVGEHVSDVVAPLPTPSVHGHSSDAHIKVGENI
SDVVAPRPAPSVHGHSSDANIKVGEFVSNVPEERPRWSKHGHASDCMLQPGCVTSGAEPA
SAALPGSSYGHSSDSGLATGCVVSGDGPKLSPLPGSAHGHSSDSNLGMGCVVSKTEPLPS
PLPGGVYGHSSDSTLGGGCVVFGTEAQPAALPGSTFGHSSDSSLAVGCVVKDKDILNQEK
TEDNEDVKGSKPAGPGEELVEFTGSWAAGFGLSPGEKSEQEYLLALCAQYEVEQYEDCYN
LMASSPECQLLKQVTRGPRGLAMDPTAVQLSEMVSLPVLIKQAVTTPLITHVSLVNKAVV
DYYFVELGVERHFEALRHFLLMEDGEFAQSLSDLLFEKLGGGQTPGELLTPLVLNSILSK
ALQYSLHGDTPLAGNFTFALRFLPETFHPHAPDSLNCLELRYKVDWPLNIIITDSCMNKY
NRLFSFLLQLKHMVWSLREVWFHLKRTALVKGAGRSVQFHQLQLYRHEMQHFVKVMQGYI
ANQILQVSWSEFTAKLASASDLDAIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLI
LKFRAQLIAQPWGSQQGEAVHPSFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDF
LLRINFNNYYKDS
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgagtcccaacaaccacatgaagtgcagcagcagcagcatcactgagctgctg
ggtgccctgtgcgactgcagcctgtctggggtgtcctggaagcggcgggccctgggtgga
gtctcgagagaaggtttccgtagagctctcaagaagtgtgcctacggctcgctgctgtct
aagctatttcaagatgacaccaaagggtccacctcaggagcgagtgccacagctaacaca
ccggccaaaaacaaagtcctgatgatctgctttgacttgcgggtggcggggtgccgagag
gaagcagagaagttggaggagcagctggggatgctgctggagggagcgtcctctggcctg
aaggagatagacgcagtcattgagctgttggtacatctcgctggttcggcaccgccaccc
cctacatcttttagcagggactacatgaggcgagagaggcccgtgctgcggaggcctcga
ccctggggctaccagagcgaagagctgcagaggctagaagcccgggcatggggtctagta
tgtggagaggagtggggaactttggaaagtttgtgtggaactcagaggttgatggatgcc
cctccaggcacaggactgctggctatgagaactaaattggaagcggaagaaagatttgag
agggataccaggatgacgctgtttggagcactgcagcactctcgaacctcagacatagac
ataagactggacctgcctcctgttcccagtaatattgatgtaactgggctgtctataagg
gtcccctcgtgtttagatcagtctgaggatgagggcttccagtccgcttccaacatgacc
ccagactctcagtcagagaccagccccattccagacgttgatatatgggaggctctccgc
acgtttgagcctggaagacgccgctgctgggagtctgttggctgccccccggggaaaaga
gagtcactctatctaacagagggaggcagggaggcctttgaccagctttatcgtctatgg
gagggggagatgagagtggtcagcactgctacaccctctcctctccttccgctgcccctg
gactctcaggcacaattggtatttgacctcctcaacgtcttgatcggagtggcatccacg
accttccctctcaaccagagtgttcagtttgatgtcagacctggtgtgtgcgtgtcagga
gcctccccagagagtgtgtgtcgtcttttgggggagctggccctgcacggcacccactac
ttgaggcttagtcgcttttctctccagagtgccgacaaaaaaggcctcgtctttcaggct
tttacaggtggtatgcggaagtatctgcattactacagggcttgtgttctcagcactcca
cccaccctcagcctgttgaccattggcttcctcttccgcaaagtgggccgccaactaagg
tacctgtcagagctgtgctgcgtagatgggcctttaggtgcaggccaggctaccttcccc
gtgggtgtgaaactgctgtcctacctgtacaatgaagcacagaataactgcagcaacgag
aactatccggtcctgctgtcgctgctgaagagcagctgtgaaccgtatacacggtttgtg
tctgactgggtgtatagtggcgtgtttcgggacgtttatggagaattcatgatccaggtc
aatgaggactatctcggctccagagacaaacacttttgggtccaaggctacactctgatc
tcgaaggatgtggaggattgtgtgcccatcttcctgggacacatcggcaatgacgtgtac
gtctgtgggaagaccatcaacctcctcaagatctgctgcccgcagcactacatctgttgg
tcggagctgccggtgcctcgcattgctgtcaccttctccctccaggaggtggaggagatc
gagagggactgcgcggtgtatcgcggacgcatggagagggttgccaagcacagtgccatc
agcagggaggagcaagcccagcgagtggaggatgcacgccaggagctgatcaatcaggtc
agagagtcggcggttaaaaccctggagagcattcgcgggcgccaggtgtcacttcgtctg
gctgacgaggccaagaagagagagcgttttgacgaactgaaacagcagctggagcaggaa
caagagtggcacagtgtcgccaagaagaggcaggaggaggatgactttggctttgccaga
gagctgagggatagagaaaaaagactacaagccttggagcagcaactggaggagagagcc
aggaaggagctgatcgctcagtacagccgtctgtcggaggaggcggctcgcagagagaga
cgggccatgtggcaggtgcagcgaatgaggctcgacgaagccagggctcagttcttcatg
catgacacgcagcagactcaggcaatgctaaataaatatccattaggccaggagagacct
cccatggaagtgttgcctcctgttccctcagctccacagactgcaccacaaccaacactg
gaacctcccagtcaggatccgtctgaacagcggctagcggagactcaagaatgtgatgct
gtatcaccaccacctgacccatctttgctcaccctaccagctgaccctgtcctcatctct
gaggacatcaacatcaagcgggtagacctcgccctacaggagatcagctctgacctacct
gaggtgtgtccgacagcacaactagtagactatgacttcagtgccccctttagtccactt
gagggtatcaccggtcaagccttaatccagccacggccttgccggggatctgcagttcag
cctgacttgatccgaaaccatccgtctttttcccacatccccattggagagaacatgtct
cagttccaggatggttttcccaaagccagcccctttggccaagcctccaaatccagcttt
cctcttggccaattcaccgcagaggagccccagaatacattcaaagcaagcagttatgga
catccctctcaagccacagtgcagctaacggatgagagtggctcaatggcaaaaaacaag
cagatggaggttgcatctatgatagaaccggtaattgaaatgggaaatttagaacgcaca
gtagagggaaatgatggcaccggtaaatcagttaaggctgcaaaaaatgatgatgtggtt
gattccccatccactacaccagaacaaagtggcgaggataatggtgtttgctgtgttggg
attgatccacttgatgcaaacactaaaccaagcactcaagaccacagttcggatgttcaa
gttaaagcgggtgataatatttctttgacaaacattcatgtctccagtgctcacctaaaa
gctggagagccggcttcagatgccgttgcccagcagccttcatccagcatccatggacag
ttctctgaggctcacttaaatgtcagacagcttgcatcagaggtaaccgatcccctcccc
tcccctaacgtccacggtcatgcatccgattcacatatcaagattggagaacatatttcg
gaagttggtgcgcctctcccttccgccagcgttcatggccactcttctgacgctcacatt
aaagtcggggaaaatgttgccgagtttgtcgctcctcttccctctcaaaatgtccacggt
catgcctcagatgcccacatcaaagtcggtgagcatgtttcagatgtagttgcccctctg
cccacccccagtgtccacggtcacagttcagatgcccacattaaagtcggcgaaaatatc
tcggatgtcgttgcaccacgtcctgctcccagcgtccacggccactcctctgacgccaat
ataaaagtgggcgagtttgtgtcgaacgtacctgaagagagacctcgttggagtaaacac
gggcatgcctccgactgcatgcttcagcccggctgcgtgacgtctggagctgaacccgcc
tcggctgctctccctggaagctcgtatggtcactcctcggactcggggttggcgactgga
tgtgtcgtttcgggagatggacccaaactgtctcctctacccggcagcgcccatggtcat
tcttcagactcaaatttaggcatgggatgcgtcgtgagcaaaactgaaccgctcccatca
ccactaccaggcggcgtgtacggtcactcttctgattcgacgctgggcgggggttgtgtg
gtgtttgggacggaggcacaacccgccgctctgcctggcagcacttttggccactcatcg
gattcttcacttgcagttgggtgcgtggtgaaggacaaagacatcttaaatcaggagaag
acggaagacaatgaagatgttaaaggttctaagcctgccggccctggggaggagctggtg
gagttcacggggtcctgggctgcaggcttcggtttgtcccctggagaaaagtctgagcag
gaatacctcctggctctgtgtgctcagtacgaggtggagcaatacgaagactgctacaac
ctaatggcttcgtcccccgagtgtcagctgctgaagcaggtaactcggggcccccgggga
ctcgccatggaccccactgctgtccaactcagcgagatggtttccctgccagttctgata
aaacaggccgtcaccaccccgctcatcacacatgtgtctttggtgaacaaggcagtggtg
gactactacttcgtggagttgggggtggagaggcactttgaggcactgcgccacttcctg
ctgatggaggacggcgagttcgcccagtccctcagcgatctgctctttgaaaagctgggc
ggtggccagacgcccggcgagctgctgacccccctggtcctgaactccatcctcagcaag
gccctgcagtacagcttacacggggacacccccttagctggtaacttcaccttcgccctg
cgcttcctcccagagaccttccacccgcacgcccccgactctctcaactgtctggagctc
cgctacaaggtggactggccgttgaacatcatcatcacggacagctgcatgaacaagtac
aaccgtctgttctcgttcctgctccagctcaaacacatggtgtggagcctgcgtgaagtc
tggttccacctcaagagaacagcgctggtgaaaggagccggtcgctcggtgcagtttcat
cagctgcagctgtacagacatgagatgcagcattttgtcaaggtgatgcagggatacatc
gccaaccagatcctgcaagtgtcctggagcgagttcacagccaagctggcctccgccagc
gacctggacgccatccaccgtacgcacgcagactacctcaacagagccatcttcaggggt
ttgctgacggagaaggcggcgccggtcatgaacatcatccacagcatcttcagcctgatc
ctcaagtttcgggcccagttgatcgcacagccctggggcagccagcagggggaggcggtg
caccccagcttcattgccatgcagcagtcgtacaacaccttcaagtattactctcacttc
cttttcaaagtggtgaccaagctggtgaacagaggctaccagcctcatctggaggatttc
cttcttcgcatcaacttcaacaactactacaaagactcctga
DBGET
integrated database retrieval system
