KEGG   Cyclopterus lumpus (lumpfish): 117732259
Entry
117732259         CDS       T09199                                 
Name
(RefSeq) contactin-1a-like
  KO
K06759  contactin 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117732259
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117732259
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:clum00537]
    117732259
Cell adhesion molecules [BR:clum04515]
 Immunoglobulin superfamily
  Contactins
   117732259
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:clum00537]
 Others
  117732259
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_DSCAM-DSCAML_C Ig_5 C2-set_2 Ig_4 Pur_ac_phosph_N Big_3_4
Other DBs
NCBI-GeneID: 117732259
NCBI-ProteinID: XP_034390975
Ensembl: ENSCLMG00005000220
LinkDB
Position
6:complement(7997951..8024198)
AA seq 1022 aa
MLHLTLLLHLLVLSLSPADASMHEEVPDFYGEEATGYGPVFEEQPVDTIYPEESPEAKIT
MSCRARANPPATYKWKMDSVEIDLDTQSSHYSLVGGNLVISNPIKTKHVGQYFCFATNIY
GTVISREASVQFGYLDLFSSEERESVYVKEGQGAVLLCAPPPHHPDELSFRWILNEFPTF
IPLDKRRFVSQITGNLYISKVDSSDSGNYSCIASSPSISKSVFSNYIPLVPLAERPIRKY
PADLKVKFPDTTALVGQNITLECFALGNPVPEIRWKKLDGQLPPNHELRMSGAHLHLYNV
QFEDAGSFQCEAVNSRGKDYHAARVSVEAFPEWVEQMSSTEQDLSRDYTMPCVASGKPEP
RIRWLKNGQLSHRKEMRFSSLTFDDSGMYQCIAENHHGVIYATAELRVYACAPTFEHNPV
KRVMAAKNGRVVIECRPKAAPKPSFSWSKDTELLHNHTRVFIWEDGSLEIRNVTRADEGR
YTCFAENDRGKANSTGSLLVTESTKITLAPSNADVKVGENTRMQCAASHDASLDITFVWS
LDGRVIDLHKESHHYERTLNGSSNGELLIKNLQLKHAGRYTCTAQTPIDNVTAAAHLVVR
GPPGAPGGVRVLNKTDKSVTLQWSRGADNHNPISKYTIQYRDSFSEDVWKNATTSPADVE
GNAEMATVVDLFPWIEYEFRVIATSTLGKGEPSSPSPKDKTLEAFPVVAPSDVGGGGGTS
RELTITWTPVQPQYYYGPDFGYIVAFKPQDGAQWMRVTVADPQAKHYIHRDPSIPPMTEY
QVKVKAFNGKGEGPFSLTAAIYSAQDAPSEAPGRVDGKALSATDAIVWWLPLSQGNVDGY
QVKYWRIPDDSEGGAETVVVPGSENHTRLESMKPDSHYLVEVRGYNSAGYGPASEHHQIH
TKKPPPSRAPKIIGQKLKSHSVVNIAWEHVKPLANEAAIEGYKVLYRQKGHSTGTLYTTS
KQYIDLPFHADGNYVVEVRAHSEGGDGAVAQININITGGGVMSAPSLSVLSLLLLAALCL
NL
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgctgcacctcaccctgctcctccatctcctggtcctctctctctcccctgcagatgca
tcaatgcacgaggaggtacccgacttttatggagaagaagccacaggttacgggccagtg
tttgaggagcagccggtggatactatctaccccgaagagtcgcccgaggcaaagatcacc
atgagctgccgggcccgggccaatccacctgccacatacaagtggaagatggacagcgtg
gaaattgacttggatacacaaagcagccactacagtttagtgggaggcaacttggtcatt
agcaaccccattaaaaccaagcatgtcggacagtacttctgtttcgctaccaacatctac
ggcacggtcatcagccgagaggcctcagtccagtttggatacctggaccttttctcgtcg
gaggagagggagtcggtgtacgtcaaagagggacagggggcggtgctgctctgcgccccc
ccaccacatcatccagatgagctgtcgttccgatggatcctcaatgaattccccaccttc
atcccactggacaagaggcgttttgtctcccagataacgggtaacctctatatctccaag
gtggactcctccgacagtggcaactactcctgcatcgcgtccagcccgtccatttccaag
agtgttttctccaactacatccccctggtgcctctggctgaacgtcccatcaggaaatac
cctgctgacctcaaagtcaagttcccagataccactgctctggtggggcagaatatcacc
ttggagtgctttgctcttgggaatcctgtccccgagatccgctggaagaagttggacgga
cagcttccccccaatcacgagttgcgtatgtcgggggctcacctgcacctgtacaatgtg
cagtttgaagacgcgggcagcttccagtgtgaggcggtgaactcgagagggaaggactac
cacgccgcacgcgtgtctgtggaagcttttcctgagtgggtggagcagatgagcagcaca
gagcaggacctgagcagggattacacgatgccctgcgtagccagcggcaaacctgaacca
cgcatccgctggctgaaaaatggacaactgtctcacaggaaagagatgaggttcagcagc
ttgacgttcgacgattcagggatgtaccagtgcatcgcagagaatcaccacggagtcata
tatgccactgccgagctgcgcgtgtatgcctgtgctcccacgtttgaacacaaccctgtg
aagagagtcatggcagccaaaaacggccgggtggtgatcgaatgtcgacccaaagcggct
ccaaagccctccttctcctggagcaaagacaccgagctcctccacaaccacaccagggtg
ttcatctgggaggatgggagcctggagatccggaacgtgacacgcgcagatgaaggcagg
tacacctgcttcgccgagaacgaccggggcaaggccaacagcacgggctctctgttggtt
acagagtccacaaagatcaccttggcaccgtccaatgctgatgtgaaagtgggagagaac
accaggatgcagtgcgccgcgtcacatgacgcttccctggacatcaccttcgtctggtcc
ctggatggccgggtcattgacttgcacaaggagagtcaccattacgaacgcaccctgaat
ggaagctcaaacggcgagctactgatcaagaacctccagctgaagcatgctggacgctac
acctgcactgcacagacccccattgacaatgtgacggccgcggcccacctggtcgtcagg
ggtccccccggagccccaggtggggtgcgagtgttgaacaaaactgacaagagtgtaaca
ttgcagtggagccgtggagcagacaaccacaaccccatctccaaatataccatccagtac
agggactccttctcagaggatgtctggaagaacgccacgacatctcccgcggatgtagag
gggaatgcggagatggccacagtggtggatttgttcccctggatagaatacgagttcaga
gtgattgccaccagcactctggggaaaggagagccgagcagcccgtcgcctaaagacaaa
accctggaagcatttcctgtggtggcgccctctgacgtcggtggcggtggaggaacgagc
cgagaactgaccatcacgtggacgcctgtgcagccgcagtactactacgggccggatttt
ggctacatcgtggccttcaaaccacaagatggagcccagtggatgagggtgacagtagcc
gacccccaggccaagcactacatccacagagacccctccattcctccaatgacagagtac
caagtcaaagtcaaggcattcaacggaaaaggagagggacccttcagcctaacggccgcc
atttattctgcacaggacgctccatctgaagctcctgggagggtcgacggcaaagctctc
tctgccacggacgccatcgtgtggtggctgcctctctcacagggcaatgtagatggatac
caggtgaagtactggaggattccggacgacagtgaagggggtgccgagacggtggtggta
cccggcagtgagaaccacaccagactggagagtatgaagccagactctcactaccttgtt
gaggttcggggctacaactccgcaggatacgggccggccagcgaacaccaccagatccac
accaagaagccccctccaagtcgagctcccaaaataattggtcaaaagttaaagagccac
tcagtagtaaatattgcctgggaacacgtgaaaccgcttgctaacgaggcagcaatagaa
ggttataaagtgctgtacaggcagaagggccactccacaggcactctgtacacaaccagc
aagcagtacatagaccttcccttccacgcagatgggaactatgtggtggaggtccgggcg
cactcagaggggggagacggggccgtggcacaaatcaacatcaacatcacaggtggaggt
gtcatgtccgccccgtctctcagcgtactctccctgctcctgttggctgcgctctgcctg
aacctctga

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