Cyclopterus lumpus (lumpfish): 117732269
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Entry
117732269 CDS
T09199
Symbol
kitb
Name
(RefSeq) LOW QUALITY PROTEIN: KIT proto-oncogene, receptor tyrosine kinase b
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117732269 (kitb)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117732269 (kitb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clum01001
]
117732269 (kitb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117732269 (kitb)
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117732269 (kitb)
Protein kinases [BR:
clum01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117732269 (kitb)
CD molecules [BR:
clum04090
]
Proteins
117732269 (kitb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
DUF2062
Motif
Other DBs
NCBI-GeneID:
117732269
NCBI-ProteinID:
XP_034390999
LinkDB
All DBs
Position
1:complement(5085301..5099467)
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AA seq
957 aa
AA seq
DB search
MRCPWVAFALQLVVLPLTVWCQPVISPSGPHVVVPKRGRLELRCRDNATASGAPSRLRWQ
RGRARRLEGEVEEGRAASVTVSAAQAYHMGRYVCVNNSTLEHSSVYVYVKDPQNAFQRTM
VNGILVREGENCTIPCLVTDPEVTLLALEACDGRPLPPGVSYHSDPQRGITIRSVRKEYE
GCFVCVGQLAGVKVTSSQYTVDVRLVPEVPPGITLSQKDTVILRRGERFEITCSSANVNP
DVSVTWDFPPAAHPEESHNSHILSGSRGYQRATSLLIAAVDQSDSGTYRCHAHNERGASA
TALQLDVRDQGFITMFGRLGPVRADVKEGESLSLRVELNAYPAPSSLFWSHGGKRLLNTT
EHVITVHRRKYRLTSELRLVRVVGSEGGIYQFSASHEDASVDHSFHVYVISKPVIIAQEG
PVDGQVRCIAAGYPVPKISWYFCERPHTRCSHLPNATQWETSDVAMVAESTFGRGEVVGR
LNVSKEHGHYPTLECVASTEGEEAYTLFSITHRPHELFTPLLTGMVATGIVLRLILVVLL
YKYVQKPKFQIQWKVIESIHGNNYIYIDPXQLPYDAKWEFPRQKLRFGKTLGSGAFGKVV
RATAYGLCSADTVTTVAVKMLNTXVSNAHATEKEALMSELKVLSYLGNHVNIVNLLGACT
VGGPILVITEYCCYGDLLNFLRRKREAFLNSQVGDGYYRNVSNQKEPAASGEVADTGYIP
MRPSEKERFSQSVDAEELSLDAEDLLSFSTRXGQGMQYITSKNCVHRDLAARNILLTHGR
VAKICDFGLARDITTDASYVLRGNARLPVKWMSPESIFDCVYTFESDVWSYGILLWXIFS
LGNSPYPGMQVGSVFYQMIQDGHRMSKPEFAPVEMYDMMLSCWNHDPLKRPSFRKLVERT
ELLLSENTRNVYLTLSNAPGHPEQQRAPSRRLSSVCSTTAPTQPLLQNTVDVFLDYV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagatgcccctgggtggccttcgccttacagctggtggtgctgccactaacagtctgg
tgccagccggtcatctcccccagcgggccccacgtcgtggttcccaagaggggacggctg
gagctgcgctgccgcgacaatgccacggcgtcgggcgccccgtccaggctgaggtggcag
agggggagagctcgcaggctggagggcgaggtggaggagggcagagcggcctccgtcacg
gtgtcggcagcacaggcctaccacatgggccgctatgtgtgtgtcaacaacagcacgctg
gagcacagctccgtctacgtatacgtgaaagacccccagaacgccttccagcgcaccatg
gtgaacggaatcctggtgcgcgagggggagaactgcaccatcccctgcctcgtgaccgac
cccgaggtcactctcctggccttggaggcctgcgatggacgaccgctgccccccggcgtg
agttaccacagcgacccccagcgggggatcaccatccgcagcgtgaggaaggagtacgag
ggctgctttgtgtgcgtggggcagctcgctggggtcaaagtgacgtcgagccagtacact
gtggacgtacgactcgtgcctgaggtgcctccggggatcacgctgtcccagaaagacaca
gtcatcctgaggcgaggagagcggttcgagatcacctgcagctccgccaacgtcaacccg
gacgtcagtgtcacgtgggatttccctccagcagcgcaccctgaggaatcccacaactca
cacatcctgtcgggctcccgtggctaccaacgcgccacctcactcttgatcgcagcggtc
gaccaatcagactcgggcacttaccgctgccacgcccacaacgagaggggcgccagtgcc
acagcgctgcagctggatgtccgagatcaggggttcatcaccatgtttggaaggctgggt
ccggtccgggccgacgttaaggagggcgagagcctgagcctcagagtggaactcaacgcc
tatcccgccccgagctccctgttctggtcccacggcggaaaacggctcctcaacaccacg
gagcacgtcatcaccgtccaccgccgcaaatacagactcaccagcgagctccgactcgtg
agggtcgtcggctccgagggcgggatctatcagttctcggccagccacgaggacgcgtct
gtcgaccattcattccacgtgtacgtcatcagcaagccggttatcatcgcccaggaaggc
cctgttgatggacaggtgcggtgcatcgccgccggttacccagtcccgaagataagctgg
tacttctgtgagcgtccccacaccaggtgctctcacctgcccaatgccacccaatgggag
acttcggacgtcgccatggtggcagagtccaccttcggccggggcgaggtggtgggccgg
ctgaacgtgagcaaggagcacggccactaccccaccctggagtgcgtggcgagcacggag
ggggaggaggcctacacgctgttctccatcacgcatcgtccccatgagctcttcactcct
ctcctcaccggcatggtggccaccggcatcgtgctcaggctcattctggtggtgctgctc
tataaatacgtgcagaaaccaaagttccaaatccagtggaaggtcatcgagagcatccac
ggcaacaactacatatacattgaccccnaccagctgccgtacgacgccaagtgggagttc
cctcgacagaaactgcgcttcggtaagactctgggctctggggcttttggaaaggtcgtg
agggccacagcgtatggactctgctccgcagatactgttacaaccgtcgccgttaagatg
ctcaatacgtaagtctccaacgctcacgccacggagaaggaggctctgatgtcggagctg
aaggtgctcagctacctggggaaccacgtgaacatcgtgaacctgctgggggcctgcact
gtcggaggcccaatcttggtgatcacagagtactgttgctatggcgacctcctcaatttc
ctgcgcagaaaaagagaggccttcctcaactcccaagtcggtgatggttactatcgcaac
gtgtcgaaccaaaaagagcctgcagcgagcggagaggtggctgatacaggatacatcccc
atgcgtccctctgagaaagaacggttttcccagtcagtcgatgcggaggagctgtctctg
gacgccgaagatctcctcagcttttctaccaggnntggccaaggaatgcagtacattact
tccaagaactgtgttcacagggatcttgcagccagaaacattctgctgactcacggccgg
gtggcgaagatctgtgactttgggctggcccgagacatcaccactgatgccagctatgtg
ctccggggcaacgctcgcctgcccgtcaagtggatgtctcccgagagcattttcgactgc
gtctacaccttcgagagtgacgtgtggtcctacggcatcctgctctggnaaatcttctct
ctgggtaacagcccgtatcctgggatgcaggtgggctcagtattttatcagatgattcaa
gacggacacaggatgagcaagcccgagtttgctcccgtcgagatgtatgacatgatgttg
tcctgttggaaccacgatcctttgaagaggccctcattcaggaaactagtggagaggacc
gagctgctgctgtcagaaaataccaggaatgtgtacctgacgctgagcaacgctccgggt
catccagagcagcagagggcgccgtcgcggaggctgagctcagtctgcagcacgacagcc
cccacccagcctttgctgcaaaacacagtggacgtcttcctggactatgtttga
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