Cyclopterus lumpus (lumpfish): 117732388
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Entry
117732388 CDS
T09199
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117732388 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117732388 (taf3)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117732388 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
RNA_pol_Rpc4
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
117732388
NCBI-ProteinID:
XP_034391191
Ensembl:
ENSCLMG00005004915
UniProt:
A0A8C2WS61
LinkDB
All DBs
Position
6:8390932..8398001
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AA seq
935 aa
AA seq
DB search
MCESYARSLLRVSVAQICQALGWDAIQLTACDQLSDVLHRYIQQLARVCHRYSELYGRTD
PVLDDVSQAFRLLGVSLSELEDYVHNLEPVAFAQQTPLFPVNKNNVLQFPQPGARDAEER
KDYIPDHLPPLVSLQEEEEEEEVLADMGTSAEAMQVALEEDDEEMDEDETVNDENHPLKR
HLDSPDAAMGMMPTSKRPRMYTGLSPEWGVEPREPLTSLNPQRVPPGMLPSHDSLDPLSP
ETPSGALPSFRPQPVVPKHSDQKGLTTPGRKSKVSSPGRQRTKSPKGVIPVPVGGSPIHS
PKPSKEKKKSPGRTKSPKSPKSPKMGSAKASQPQSKTDSMLKLPLCALNERMGKENIHMR
QNIEDRELAEGPFKKLEPDNAAIDDSIDAVIARACAEREPDPFAFSSGSDSDSNGFSSPR
RLTIMEPSTPKLSIGISVKDTSAPLHLQAHAGLGNWTMDDSINEVIRKVNQGGLSAPPPN
LGDYVSSGSASPPTPEPLLKVFEEKNKIVPPVDVKKKLKKELKTKLKKKEKDKPKDKDRE
KDKGKLKEKNKDKNREKNKDFSKDGKMPWKEFGVKDDEHFLMRDFTLPEGSIKIKTRDVD
APKKEKEKHKDKKKDKEKSKKDKDKRDKGKDRSKDDRPNKSAVAPFVLSEMPPLFSPSAC
LRLPSMLPSLAPILQEKDVKSKEKDKKKDKKEKKKKKDKEKDKEREKAKEKEREKEEKRK
EKEREKEKREKEKEKEKERIRLEKVKVDTPAALPSPVIPRLTLRVGAGQDKIVISKVVPN
SEPKTPAPKTPAAKSGPGNRPRTPPPLPVLCPVVPTLPPPPSPLPPAPAPSSLLPSAPLL
SPTASFKTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPC
VGIPTAPPEDQQWFCVKCSSRKKDKKHKKRKHKVH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctatgcccgctcgctgctgcgtgtttcggtggcgcagatctgccaggct
ctgggctgggatgcgattcagctcactgcgtgcgatcagctgtccgatgtgctgcatcga
tatatccagcagttggccagggtctgccatcgctactctgagctctatggaagaacagat
ccagtcctggatgatgtcagccaggccttcaggctcttgggagtgagcctgagtgaactg
gaggactatgtccacaacctggagcctgtggccttcgcccaacaaacgccgcttttccct
gtcaataaaaacaacgtccttcagtttccccagcctggagcccgagatgcagaggaaagg
aaggattacattccagatcacttgccacccctggtctccttacaagaagaagaggaggag
gaagaggtccttgctgacatgggcacttcagccgaagctatgcaggtggcactggaggag
gatgatgaggaaatggatgaggatgagacggtcaacgatgagaaccaccctctgaagagg
cacctggacagtcctgatgcagctatgggcatgatgccgacctccaagagaccacgcatg
tacactggcctcagcccagaatggggggttgagcccagggagcccctcacctctctcaac
cctcaacgtgttcccccaggcatgctgccttctcatgatagtcttgaccccctgtcacct
gaaacaccttctggagccctgccttccttcagacctcagccggtggtaccaaaacactct
gatcaaaagggccttaccactcctggaagaaagtctaaggtctcatcccctggcagacaa
cggactaagtccccgaaaggggtcattcctgttccggtgggtggtagtcccatccattct
ccaaaaccgtctaaagaaaagaagaaatctccagggaggacgaagagtcctaaaagcccg
aagagcccaaagatgggttcagccaaagcatcccaaccccagagcaagacagatagtatg
ctgaagctaccgctgtgcgcgctgaatgagaggatgggcaaagagaacatccatatgcgt
caaaatatcgaagacagggagttagctgagggccccttcaagaaactagagcctgataac
gcagccatcgatgactccatcgatgctgtgattgccagagcgtgtgccgaacgggagcct
gatcctttcgctttctcctcgggttctgattcggatagcaatgggttctccagccccagg
aggctgaccatcatggagccgtctacacctaaactctcgattgggatctctgtaaaagac
acgtcggcaccacttcacctgcaggcacatgcaggcctaggaaattggactatggatgat
tcaatcaatgaggtgatccgaaaggtcaaccaggggggtctgtccgcacccccgccaaac
ctaggagactatgtctcgtcaggatcagcctcaccaccgactcctgaacctttactcaag
gtgtttgaggagaagaacaagattgtgccacctgtagacgtcaagaaaaagctgaagaag
gaactcaaaactaaattgaagaagaaggagaaggacaagccaaaagacaaagaccgggaa
aaggataagggcaagctgaaagagaagaacaaggataagaacagggagaaaaacaaggat
ttttccaaggatggcaagatgccctggaaggagttcggagtgaaggacgacgagcacttc
ctgatgcgagacttcactctgcccgagggctccatcaagataaaaaccagagatgtagat
gccccaaagaaggagaaggagaaacacaaagacaaaaagaaagataaagaaaaaagtaaa
aaggataaagataagagggacaagggtaaagacaggagcaaggacgacagaccgaataag
tctgcggtggccccctttgtgctgagtgaaatgccaccactgttcagcccctccgcctgc
ctgcgcctcccctccatgctcccttctttggccccgatcctccaggaaaaggacgtgaag
agcaaagagaaggacaagaagaaagacaagaaggagaagaagaaaaagaaagacaaggag
aaggataaagagcgagaaaaggccaaagaaaaggagagggagaaagaggagaagaggaaa
gaaaaggagagggaaaaggaaaaacgagaaaaggagaaagagaaagaaaaagagagaatt
cgattggagaaggtgaaagttgacactccagcagctctaccatctccagtcatccccaga
ctgacgctcagggtgggagcaggccaggacaaaattgttatcagcaaggtggttccaaat
tcagagcccaagacgccggcacccaagacccccgctgccaagtctggacccgggaatcgt
cctcggactcccccaccactcccagtgctctgcccagtcgtgcccactctgcccccgcct
ccctctccacttccaccagctcctgccccgtcatcgttgctcccctcggcccctctgctc
tctcccaccgcatccttcaaaacaccggtccgcagcgttgtaaccgagaccgtcagcacc
tacgtgatccgagatgaatggggaaaccagatctggatttgtcctggatgcaacaaacct
gatgacggcagtcccatgataggatgtgatgactgtgacgattggtatcattggccttgc
gttggtattcctacagccccccctgaggaccagcagtggttctgtgttaaatgttccagc
aggaagaaggacaaaaaacacaagaaaaggaaacacaaagtgcattga
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