Cyclopterus lumpus (lumpfish): 117732415
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Entry
117732415 CDS
T09199
Symbol
rasgrf1
Name
(RefSeq) LOW QUALITY PROTEIN: ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117732415 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117732415 (rasgrf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
MYO6_lever
Par-4_C
DUF8637
DUF641
IQ
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
117732415
NCBI-ProteinID:
XP_034391240
Ensembl:
ENSCLMG00005008519
LinkDB
All DBs
Position
6
Genome browser
AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVSYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFENESSS
RPSGLYLLEGCICDRAPSPKPSQSAKECLEKQYYFTVSFTHENQKALELRTEDVKESDEW
VAAISHASYRNLANEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LLKDNEKIQASPAAAPTDDDSEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHIERPVWDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICNRGSGGKLHLTKNGVVSLIDCTLMEDPEGTDDESKSDK
SGQDMEHLDFKIVVEPKDSQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTADVVLDKLITIYKKPISAIPARSLELFFASSQNSKLLYGEPPSSPRAS
RKFSSPPPLAIAKNSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSISPFSK
TTLDINKLYVSSPVSSKIPDEGEDKKDKVEDTSVTKQDHSVREESDNDPNQSDEGDPEAS
PTKSPTTPKNIKCKNSSEFSLFSYNNGMVMSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSPDFESNNELKT
KVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDHGDNQITLEDVTRLMGEGKIEHFESQ
SALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMRTTKHFNDISNLIATEI
LRCDDVVTRVLVIEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKASKQTKA
LIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKIDLQPKVAQYLLDNSFVLDEESMYEASLRIEPKVPN
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggccatgtcagctacctggggcttttggcgaaa
aaggatggtacaagacgagggtgcttgagcaaaaagagctcagacaacacgaaatggcac
acaaagtggtttgctttgttacaaaatatgctcttttattttgagaacgagtccagctcc
cgaccctctggattatacctgttggagggatgcatatgcgacagggcgccttcaccgaaa
ccttcacagtcagccaaggagtgtttggaaaagcagtactatttcaccgtcagcttcacc
catgaaaatcaaaaggcgctcgagttacgcacggaagatgtaaaggagagcgatgaatgg
gtggctgcaatatcacacgccagttacagaaacttggccaacgagcatgagaccctcatg
cagaagtatcttcatctgcttcagattgtggagacggagaaaacagttgctaagcaactt
cgacaacagatagaagatggggaaatagagattgaaaggcttaagtcagagatctctggg
ctgctcaaagacaatgagaagattcaggcgagccctgcagccgccccaactgatgacgac
tcagaaatcaagaaaatcaaaaaagtccagagcttcctgcgaggctggatctgcaggagg
aagtggaagacaattatccaggattacatccgctcaccgcatgcagagagcatgaggaag
aggaaccaggtggtgttcagcatgttggactcagaggccgagtacgtccagcagcttcac
atcctggtgaacaacttcctgaggccgctccgcatggcagccagctccaagaaaccgccc
atcacccacgatgatgtcagcagcatattcctcaacagtgaaactatcatgtttctacat
cagatattttaccagggtctaaaagccagaatagcgagctggccaacgttagtgctggcc
gacctgtttgatatcctgctgcccatgctgaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggctcactgcaagcagaaccgagactttgacaagctgctg
aagcagtacgaggccaagcccgactgtgaggagaggactctggagaccttcctcacctac
cccatgttccagattccccgatacattcttacactccacgaacttctggcccacacaccc
catgaacatatagagagaccagtctgggactacgccaaatctaagctggaggagctttct
agaatcatgcatgacgaagtgagtgagaccgagaacatcaggaagaacctggcaatagag
cgcatgattgtagagggctgcgagattctcctcgacaccagccagacgtttgtaagacaa
gggtctctcatccaggtgccaatgagcgagaagggcaagatcacccgtgggcgactgggc
tctctgtccctgaaaaaggagggggagaggcagtgctttctcttctccaagcatttaatc
atctgcaatcggggttctggggggaaacttcatctcaccaagaatggagtagtctcgctt
attgactgcactctaatggaggaccctgagggaacagatgatgagtccaaatcagacaag
agtggccaggacatggagcacctggacttcaagattgtcgtggagccaaaggacagccag
tcattcacagtcatcctggtggcctcctcgaggcaggagaagtctgcatggaccagtgac
atcagccagtgcatagacaacatccgctgcaatgggctgatgatgaacgccttcgaagac
aactccaaagtcacagtgccacagatgatcaagtcagattcaagtctgtactgcgatgac
gtggacatccgcttcagtaagatgatgaactcctgcaaggtgctgcagatccgctatgcc
agcgttgagcgcctgctggagagactgactgacctccgtttcctctccatcgacttcctc
aacaccttcctgcactcctatcgcgtgttcaccacagctgatgtggtgctagacaaactc
atcaccatctacaagaagcccatcagtgccatccctgctcggtccctggagttattcttt
gccagcagtcagaacagtaaactcttgtatggagagcctcccagctcccccagagccagc
agaaagttctcctccccacctcctctcgctatcgccaagaattcatccccaaaccgccgg
cgcaagctctctctcaacatccccatcatcactgggggcaaagctcttgacctggctgcc
ctcagctgctcctccaatggctatgcaagcatgtactcatccatctccccattcagcaag
accaccttggacatcaacaaactgtacgtgtccagtcccgtctcgagcaaaatccctgac
gagggagaagacaagaaggacaaggtggaggatacatcagtgaccaaacaagatcactct
gtacgagaagaaagtgacaatgatccaaaccagagtgatgaaggggatccagaagcctct
cccaccaaatcaccaacgaccccaaaaaacatcaaatgcaaaaactcctcagagttctca
ctgttttcctacaacaatggcatggtgatgtcctcatgtcgagagctggataacaaccgc
agtgccctgtccgctgcctccgcctttgctattgctacagctggagccaacgagggcaca
cctaccaaggaaaaatatcgccggatgtccctcgccagtactggcttcccaaccgatcag
agaaatggagacaaagagtttgtgatcagacgagcagcgacaaaccgagtgctgaatgtc
ctgaggcactgggtgtccaaacactctccggactttgagagcaacaatgagctgaagaca
aaagtcattgccttcctggaggaagtgatgcatgaccctgagctgttgacccaggagagg
aaagcagcagccaacatcattaggactctaactcaggaagaccacggtgacaatcagatc
acccttgaagatgtgacaagactgatgggtgaagggaagatagagcactttgagagtcag
tctgcgttggagatcgcagaacagctcactctgctggaccacctggtgtttaaggttatc
ccatatgaggaattctttggacaaggctggatgaagaatgacaagaatgagaagacgccg
tacatcatgagaacaacaaagcacttcaatgatataagcaaccttattgctacagagatc
ctgcgctgtgatgacgtggtcactcgagtgttggtcatagaaaaatgggtggctgtagca
gacatctgccgctgtctccacaactacaacgccgtgctcgagatcacctcctccctcaac
cgcagctctgtcttccgtctcaagaagacctggctcaaggcttccaagcagacaaaagca
ttgattgacaagctgcagaaactggtctcatcagaggggaggttcaaaaacctgagagag
gcgttgaagaactgtgatcctccctgtgtgccctatctggggatgtacctcacggacctg
gctttcattgaggagggaacgccaaactacacagaagacaacttggtcaacttctcaaag
atgagaatgatttctcacatcatcagagaaatcaggcagtttcagcaaacggcatacaag
attgacctgcaaccaaaggtagcccagtacctactggataatagctttgttctggatgaa
gaaagcatgtatgaagcctctctcagaattgagcctaaagtgcccaactga
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