Cyclopterus lumpus (lumpfish): 117732444
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Entry
117732444 CDS
T09199
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117732444
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117732444
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117732444
NCBI-ProteinID:
XP_034391280
Ensembl:
ENSCLMG00005012424
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All DBs
Position
6:complement(9511310..9525162)
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AA seq
1186 aa
AA seq
DB search
MERFQSSMRKRLYSLPQNIGQKAFVIDEGDNGDKDTKRKSIRLKHLSSPSPVSSCKSIEE
ARSEDLERDVTVKTNLNGDCRLFRGSISSITGRHPPGSDPAEQQRLIPEAGVRESYPGEH
SPVAQQRATGGMSGAAGQGSGFDQSSFIKLEGTEQIIPEDDRLYQAGFMHRQFGAMLQPG
VNKFSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGIT
FFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPHQIKIKYLKTWFVVD
FISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEVF
HMTYDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVTRNKMVNDTWGQQY
SYALFKAMSHMLCIGYGLYPPIGMADVWLTILSMIVGATCFAMFVGHATALIQSLDSSRR
QYQEKYKQVEQYMSFNKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLREEIINFN
CRKLVASMPLFANADPNFVTSMLTKLHFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK
NSNDTKLSDGSYFGEICLLTRGRRTASVRAENYCRLYSLSVDNFNEVLEEYPMMRRAFET
VALDRLDRIGKRNSVLQNKVQHHHSSGTLNFQESEIIQRIVQHDRDMAQCTQLIQTSPLN
LRPPPAPPSPIPVIWAPLIQAPLQAAAATTPLALALAHHSQLPPILFHHPLSPGSLKDPV
GHPKKFYVGANTSSTCGSGPGSPISSYKIRSGIETHTLASLRAQHLAAGPVSPTLTSQPI
FTSSLQPLGPLPSHHLPYHPPHSGIASVFPISQTTVSYTCSAQLHPQPFHGAMTTPPHPI
GFLQQGARGRLAVRFPAPSVSTIIPLIASSVGPILSQLQQPSHATVQQMGYSHDRAGRIS
SGLNLPHFPFITSTQSSTGFIQPGSAVVAGAAASLAQQSLAGLQSVFLPKVLAEHSALAS
LGQYGSGEASPCYTPPVHSPSIQSPVTGRTVYHSELPSSVGSHSPFQTSCPARVACTLKE
RAESSVDLFTQEIKTISGSYSASHQERPLAMSGSSEGVAGGTSPFSSPMSTSKPYSPNLG
QAAPVGRTHSGPEPQNQSVGVHSSRARSPAEILETGHKQSQLPSNL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattccagtcttccatgcgcaaacggctgtacagcttgccgcaaaacattggg
caaaaagccttcgtgattgacgaaggagacaacggcgacaaggacactaagaggaaaagt
attcggctaaaacatttgtcctccccgtctcctgtaagcagttgcaagagtattgaggag
gccaggagcgaagacttggagagggacgtgactgtgaagaccaacttgaacggggactgc
cgcttatttaggggcagcatctcttccatcaccgggcggcatcctcccgggtccgatccg
gcggagcagcagcgcctcatccccgaggcgggtgtcagggagagttaccccggtgagcac
agccccgtggcccagcagcgagcaacgggtggtatgagtggcgcagccgggcaaggctct
gggtttgaccagtcaagttttattaagttggagggcaccgagcaaatcatacctgaggac
gaccggctgtaccaagccggcttcatgcaccggcagtttggggcgatgctccaaccggga
gtcaacaagttctccctgcggatgttggggagtgagagggccgtggagcacgagagggag
cgagtgaagtctgctggcttctggataatccatccgtacagtgattttaggttctactgg
gatctgaccatgctgctgctgatggtggggaacctcatcatcatccctgtgggcatcacc
ttcttcaaggacgagcacacgccgccctggatcgtctttaacgtggtctcggacaccttc
ttcctcatggacctggtcctcaacttccgcacgggcatcgtcaaggaggacaacacggag
atcatcctcgacccgcatcagattaagatcaaatacctgaagacctggtttgtggtggat
ttcatctcgtccatacctgtggactacatctttctcatcgtggagacccgcatcgactca
gacttttacaaaacagcccgagccttgaggattgtccgcttcaccaagatcctcagtctg
ctgcggctactgcgcctctccaggctcatccgctacatccaccagtgggaagaggttttc
catatgacctatgacctggccagcgccatggtgcgcatcatgaacctgattggtatgatg
ttgctgctgtgtcactgggatggctgtctgcagttcctggttcccatgctgcaggacttc
cctcctgactgctgggtcactagaaacaagatggtgaatgacacttggggtcagcagtac
tcctacgccctgttcaaggccatgagtcacatgctgtgcattgggtacggcctgtacccc
cccatcggcatggctgatgtgtggctcaccatcctcagcatgattgtgggcgcgacctgc
tttgccatgtttgtggggcatgcaactgcactcattcagtctctggactcctccaggagg
cagtaccaagaaaagtacaagcaggtggagcagtacatgtccttcaacaagctccctgcc
gacatgcggcagaggatccacgactactacgaacaccgttatcagggcaagatgtttgac
gaggaaagcattttggaggagctgaatgagccactgcgagaggagatcatcaactttaac
tgtcgcaaactggtggcctccatgcctctttttgcaaacgccgatccgaactttgtcacc
tccatgctgaccaaactgcacttcgaggtcttccagccgggagactacatcatcagagag
ggaaccatcggcaagaagatgtacttcatccagcacggtgtcgtcagtgtcctgaccaag
aacagcaatgacaccaagctgtcggatggctcttattttggagagatctgcctgctcacc
cgaggcaggaggaccgccagcgtgcgagcagaaaactactgtcggctgtactcgctgtct
gtggacaacttcaacgaggtgctggaggagtaccccatgatgaggagggcctttgagacc
gtggctctcgaccgcctggaccgcatcgggaagaggaactctgttctgcagaataaagtc
cagcatcaccacagttctggcactttaaacttccaagagagcgagatcatccaaagaata
gtgcaacatgaccgtgacatggcccaatgcacgcagctgatccagaccagcccactgaac
cttcgccctcctcctgctcccccgtcacccatcccggtcatctgggccccactaattcag
gccccgcttcaggctgctgctgccaccaccccgctggctctggccttagcccaccactcc
cagctgcctcccatcctcttccaccatcctctgtcaccaggctccctgaaggaccccgtc
ggccatccaaagaaattctatgttggagcgaacacgtccagtacctgtggttcagggccc
ggttctcctatcagttcctacaaaatcagatctggaattgagactcacacattggcgtcg
ctcagagcacagcatctcgcagctgggcccgtgtcccccacactgacgtcccagcccatc
ttcaccagcagcctgcagcctctgggccctctgccctcgcaccatctcccataccaccct
ccccactctggcatagcctcagtcttccccatcagccagaccacggtctcctacacctgc
tctgctcagctccaccctcagcccttccacggtgctatgaccaccccaccacacccgata
ggtttcctccagcagggggcgaggggtaggctagcagtgagattcccagccccctctgtc
tccaccataatccctctcatcgccagctcagtcggccctatactaagccagctgcagcag
ccctctcacgccaccgtgcagcagatggggtacagtcatgacagagcaggcaggatatcc
agcggtctgaacctcccacattttcccttcatcaccagcactcagtcctccactggattt
attcagccagggtctgcagttgtagctggggccgcagcctccctggcgcagcaaagcctt
gcaggtctccagtctgttttccttcccaaggttctggccgagcactcggccctcgcctcc
ctgggccagtatggctctggcgaagcttcgccctgctacacgcctccagtccacagtccg
agcatacagagccctgtgaccggaaggacagtttaccacagtgagctccccagctctgtg
ggctctcacagcccctttcagacctcatgccctgccagggtggcctgtacccttaaagag
agggccgagtcctcggtggatctctttacccaggaaataaagactatctcaggctcttac
agcgcttcacaccaggaaaggcctttggccatgagcggctcctcagaaggggtagcaggg
ggaaccagccccttttcctcccccatgtctacgagcaaaccctacagcccaaacctgggt
caagctgctcctgtcggtcggacacattcagggcctgaacctcagaaccagtccgtcggt
gttcactcttccagggctagatcccctgctgagatcttagagaccggacacaagcagtcc
caacttccatctaacttgtga
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