Cyclopterus lumpus (lumpfish): 117732454
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Entry
117732454 CDS
T09199
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117732454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117732454
04131 Membrane trafficking [BR:
clum04131
]
117732454
03029 Mitochondrial biogenesis [BR:
clum03029
]
117732454
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117732454
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117732454
mRNA cycle factors
P-body specific factors
117732454
Membrane trafficking [BR:
clum04131
]
Others
Actin-binding proteins
Myosins
117732454
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117732454
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117732454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
117732454
NCBI-ProteinID:
XP_034391292
Ensembl:
ENSCLMG00005013152
LinkDB
All DBs
Position
6:9835335..9849520
Genome browser
AA seq
1821 aa
AA seq
DB search
MAASELYAKYARVWLPDAGEVWKSAELTKDYSPGDLKLSLQLEDGSDVEHKIDPQTNNLP
PLRNPNILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSCSSSEASVEERVLASNPIMEALGNAKTTRNDNSSRFGKYIEIGFDKKHCIIGANMR
TYLLEKSRVVFQTDEERNYHIFYQLCASSHLPEFKAFKLGCADDFHCTNQGQSPVIDGVD
DAKEMCNTRRAFSKLGIKESDQMAIYQILAAILHLSNVEVKDQSADRSSILPDNVHLMVF
CELMGVPCEEMAHWLCHRKLQTTTETYVKPVSKMNAVNGRDALAKHIYARLFSWIVCSIN
NALKSAAKKRSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFDDNQPCIDLIEAKLGVLDLLDEECKMPKGCDDTWAQKLYNTLLKQNAFFDK
PRLSNRAFIIHHFADKVEYECEGFLEKNRDTVNAEQINALKKSKVDWLLKLFEDDEKTTS
SAKKRSSVTGRTGPTQRDNKKTVGLQFRQSLHLLMDTLNATTPHYVRCIKPNDNKSPFFM
DPMRAVQQLRACGILETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLHDRKLTCKNLLE
KLVRDQDKYQFGKNKIFFRAGQVAYLEKLRSDKLRMACVRIQKTIRCWLARKKYLRMRES
AITIQRHVRGHQARCYVKFLQRTRAAVIIQRNVRMWVTRTRYQQQRSAAITIQCFLRTYM
ARKQYYKLLFEHKALVIQKWFKGWQARRHYKRIMEAIVLLQSCVRRMKAKKELKKLKVEA
RSVERVKKLNIGMENKIMQLQHKINEQHKDNRELSERLNVMEKTQTTEREKQNREIENLR
RSEQEARAKAVKLPSLLEQLSFLQHELENTRREKDDLQEQTKVYKEQTHQVVEDLNMRNS
LLISEKDELSKKNLEQADQLTEIKTNVENAKRLEKDLAEERSRYQSLLSEHLHLEERHRD
VKEEMNLGVSSSKSGHKRTDSNYSSNSSEFSQSLCSSEGEDGAIQTEDETQTTVDLPILL
KLQRRVKELEQDKQSLWQQLDNGEEAQQEKAKEVEEQRTVGRAELDLETLKRQELESDNK
KLKRDLDELRNSLTNENSELAPPIPGSLPYNILLEHLGSSNDELEMRKEEVLLLRSHMVR
QEALKHKDSVLGEGVNLDLSEIPSYEDVDKSINIHTLNEDGELWLAYEGLKETNRMLECQ
MQEQKRAGHEEYKKLLEEVNKFKAEKEQQQKLLAQSLLLPEDARIEASLKHEMTRLTNEN
LELMEQQEQQVETIRKLKKQLKLYIKKVEDLEASAQQKNKSPVTTAPVRAVNITRKEKEY
RGMLEYREGDETRMVKKLVVHLKPRGVAVSFIPGLPAYIIFMCVRYADNVNDDQRVSALL
NSTISSIKGVIKRSGGDFEVVSFWLANTCRLMHCLKQYSGDEAFITHNTAKQNEHCLANF
ELSEYQQVFGDLAIQIYRQLIKCMEDTLQPLIVASMLEHETIQGVMGSKPTGLRKRSTSF
PEQAVTLEVLLQRLGVFLSTMSQHGMDLDLIKQLVKQQFYIICAVTLNHLLLRKDMCSWS
KGLQIRYNVWHLEEWLAEREMSDCGAKETLEPLLQAAQLLQIKKKTEADAQVICTMCSAL
TTAQIVKVLTLYTPVIEFEERVSTTFITTIKNLLKDRVESTTLMMDAKKIFSITIPFTPS
PVALETIQIPASLNLGFLARI
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctgaactttacgccaagtatgcccgtgtatggctgccagatgctggagaa
gtgtggaagtcagcggagctcaccaaagattacagtcccggcgacctgaagctgagtctg
cagctggaggatggctcggacgtggaacataaaattgacccccaaaccaacaacctgcca
cctctaagaaaccctaacatcctggttggggaaaatgacctcacagctctcagctacctg
cacgagcctgcagtgctacacaaccttaaagtgcgctttatcgactccaagttgatttac
acatactgtgggattgtcttggtggccatcaatccctatgagagcctgcccatctatgaa
actgacatcatcaatgcctacagtggacagaacatgggagacatggacccccatatcttt
gcagtagcagaagaagcctacaaacagatggccagagatgaaagaaaccagtccatcatt
gtgagtggtgagtcgggagctggcaaaaccgtctctgctaagtatgctatgcgttacttt
gccacagtcagctgctcctctagtgaggccagtgttgaggagagagtcctggcctccaac
cccatcatggaggctcttgggaatgccaagacaacaaggaatgacaacagcagtcgcttt
gggaagtacattgagattgggtttgacaagaagcattgtatcattggggctaacatgaga
acctacttactggaaaagtctagagttgtgttccagaccgacgaagaaaggaactaccat
atattctaccagctgtgtgcctcttcacatttaccggagtttaaagccttcaagttaggt
tgcgcagatgacttccactgtactaaccagggtcagagcccagtcatagatggagtggat
gatgccaaagagatgtgcaataccaggagggctttctccaagttaggaatcaaagaaagt
gatcaaatggcaatttaccaaattctggcagctattcttcatcttagcaacgtggaggtg
aaagatcagtcagcagacaggagcagcatcttgccggacaatgtccacctgatggtgttt
tgtgagttgatgggtgtaccctgtgaagaaatggcccactggttatgtcacaggaaactg
cagacgaccacagaaacctatgtcaagcctgtctccaaaatgaatgcggtcaatggccga
gatgccctagccaaacacatctatgccagactctttagctggatcgtgtgcagtatcaac
aatgccttgaagtctgcagcaaagaaacgctccttcattggtgtgctcgacatttatggg
tttgaaacatttgacgtcaacagctttgaacagttttgcatcaactatgccaacgagaag
cttcagcaacagttcaacctgcatgtcttcaaactggagcaggaggagtacatgaaagag
gagatcccgtggacattgattgactttgacgacaaccagccttgcattgatctgattgag
gccaagctgggggttctggaccttctggatgaggagtgcaaaatgcccaaaggctgtgat
gacacatgggcccagaaactgtacaacaccctcctgaagcagaatgctttctttgataaa
cccaggttgtcaaatagagctttcatcatccaccactttgcagacaaggtggagtacgag
tgtgaaggtttcctggagaaaaacagggacacagtcaatgcggagcagataaatgcactg
aaaaagagcaaggttgattggctgctgaagctgtttgaggacgatgagaaaacaacaagt
tctgcgaagaagcgttctagtgtaactggaaggactggtccgactcagcgggataataag
aagactgttggacttcagtttcgacagtctctacatttgctgatggacacattaaatgcc
acaactcctcactatgtacgctgcatcaagccaaatgacaacaaatctccattcttcatg
gatccgatgagggcagtgcagcagctgcgagcatgtggcatcctcgaaacaatccggatc
tcagcagcaggcttcccatctagatggacctatcaggaattctttagtcgctatcgggtc
ctcatgaagcaaaaggacgtgcttcatgacagaaaactaacctgcaaaaatctcctcgaa
aaacttgtaagggatcaggataagtatcagtttggcaaaaacaagatcttcttcagggcg
ggtcaggtagcttacctggagaagctgcgttctgacaagctgcgaatggcttgcgtccgc
atccagaagaccatccgctgctggctggcccgcaaaaagtacctgaggatgagggaatct
gctatcaccatccagagacatgtacgaggtcaccaggcacgctgctatgttaagtttctg
caaagaactagagcagctgttatcattcagcgtaatgtgcgtatgtgggtgaccaggaca
cgctaccagcagcagcgctccgcagccatcactattcagtgcttcttgaggacctacatg
gctagaaagcagtactataagttgctatttgagcataaagctcttgtcatccagaagtgg
tttaaaggctggcaggctagacggcattacaaacgcatcatggaagccatcgtcctgctg
cagagctgtgtgcgccgcatgaaggcaaagaaggaactaaagaagctgaaagtggaggct
cgctctgtggagcgtgtcaagaagctcaacattggcatggagaacaaaattatgcagttg
cagcacaagataaatgagcagcataaagacaacagagagctcagtgaaaggctgaatgtt
atggagaagactcagactacagagagagagaaacagaacagagagattgaaaacctccgt
agatcagagcaggaggccagagccaaggccgtgaagcttccttcgctgctggagcagctc
tccttccttcagcacgagctggaaaacacccgcagagagaaagatgacctgcaagagcag
acaaaggtctacaaggagcagacgcatcaggtggtagaagaccttaatatgaggaacagc
ttgctgatcagcgagaaagatgaactgagcaaaaaaaacctggaacaagcagatcagtta
acagaaatcaaaaccaacgttgagaatgcaaaaaggctggagaaggacttagctgaagag
cgctctcgctaccaaagtctcctgagtgaacacctgcatctggaggagcggcacagagac
gtgaaggaagagatgaatctcggcgttagttcaagcaaatctggtcacaagaggacagac
tccaactacagcagcaactcatctgagttcagtcagagcttatgctcttctgagggggaa
gacggcgccatacaaacagaggatgagacccagacgacagtggacctgccgatcctactg
aagctccagagacgagtgaaggaactggagcaggacaaacagtcactatggcagcagctg
gataacggagaagaagcccaacaagaaaaggcaaaagaggtagaggagcagagaactgtt
ggcagagcagaactggacttggaaacactgaagcggcaagaactggagtctgacaacaag
aagttgaagcgggatctagatgagctgagaaattctctgaccaatgagaatagtgagttg
gcgccccctatccctggctcgctaccctacaacatactgctggaacatctcggttcttcc
aacgatgaactggagatgcgaaaagaggaagtgctgctcctccggtcccacatggtccgc
caagaggctcttaaacacaaggactctgtgctcggggaaggtgtgaatttggatctaagt
gaaattccttcatatgaagatgttgacaagtccattaacatccatacactcaatgaagat
ggagaactgtggctggcttatgaaggcttgaaagagaccaatagaatgttggagtgccag
atgcaggagcagaaacgtgctggccacgaggagtataagaagctgcttgaggaggtgaac
aagtttaaggctgaaaaggagcaacagcagaagctgctggcccagagcctcctcctgcct
gaagatgcccgtattgaggcgagcctgaagcatgagatgacacggctcaccaatgagaac
ctggaactcatggagcagcaagagcaacaagtcgaaactatacgcaagttgaaaaaacaa
ctgaaactttacattaaaaaagtggaagatttggaagcgagtgctcagcaaaagaataaa
tcccctgtgacgactgctcccgtcagagcggtgaatatcacccgtaaggagaaagagtac
cggggcatgttggagtacagggagggtgacgagacccgcatggttaagaaactggtcgta
catctgaagcctcgtggtgttgcagtcagcttcattcctgggcttccggcttacatcatc
ttcatgtgcgtacgatatgcagacaatgtgaatgatgatcagagagtcagcgctctgctc
aattccaccatcagcagcatcaagggggtcattaagaggagcggaggtgattttgaagtg
gtgtctttctggctggccaacacatgcaggttaatgcactgtctgaagcagtacagcgga
gatgaggccttcataacgcacaacactgccaagcagaatgagcactgcctggccaacttt
gaactgtctgagtaccagcaggttttcggtgatctagccatccaaatttaccgccagctc
atcaaatgcatggaggacaccctgcagcccctgattgtggcaagcatgctggagcacgag
acaatccagggtgttatggggtccaaaccgaccggcctgagaaagaggagcaccagtttc
ccagagcaggctgttacactggaagtcctgctgcagcgtcttggcgtcttcctcagcacc
atgagtcagcacggaatggacttggacctcattaaacaactagtcaagcagcagttttac
atcatctgtgcggtcacactcaaccacctgctgctgcggaaggacatgtgctcctggagt
aaaggcctgcagatcaggtacaatgtatggcacttggaagagtggctggcggagagggag
atgtcagactgcggtgccaaggagactctggagcctctcctacaggctgcacagcttcta
cagatcaagaagaagactgaggcagacgcacaagttatttgcaccatgtgctctgccctc
accacagcacagattgtcaaagtgttgaccttgtacaccccagtgattgagtttgaggag
cgagtgtcaaccactttcatcacaactattaaaaaccttttgaaagacagagttgagtca
accacattgatgatggatgctaagaagatcttttccatcaccatccccttcacaccgtcc
cctgtggccctggagaccatccagatccccgctagcctcaatctgggcttcctcgcccgc
atctag
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integrated database retrieval system
