Cyclopterus lumpus (lumpfish): 117732497
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Entry
117732497 CDS
T09199
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clum01001
]
117732497
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117732497
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117732497
Protein kinases [BR:
clum01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117732497
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117732497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-B_box_Trim66
Bromodomain
zf-C3HC4
USP7_ICP0_bdg
zf-C3HC4_2
Exonuc_VII_L
TTC3
Motif
Other DBs
NCBI-GeneID:
117732497
NCBI-ProteinID:
XP_034391369
LinkDB
All DBs
Position
6:6543698..6554096
Genome browser
AA seq
974 aa
AA seq
DB search
MDGRVDKRETGDAAACAVENEAESKQVRGEESGASAANHLDTCPVCHLNFPSREPQLLPC
LHSFCKKCLPSPSRNLAMAEPPNSQVDSATKPLNVMRCPVCRQECMEVDVMENVFVKDCA
EAPSSTVERTVQLCMTCDDNTEAAGFCVECVEYLCATCVEAHQRVKFTKDHAIRHKEEVS
HEAPGASAQRPVFCDIHKQEPLKLFCETCDLLTCRDCQLVKHKDHNYQFLEDAYKSHKQH
MESMTHQLQEKNKQIEEVSNSINRGLLQVNQNRTSVHNEIKKSICSLILEINKKGKMLVN
QLETVTKDHESVLRKQQEDIGYLSRHLNHVINFTKWATARNGGTALLYCKRLILFQIGNL
LRAKCSTSFIPQSTVRFQSRSSYWASNVDLGSLVVESVPGHQLGGFQGIPHQLSHPGHGP
SGSPHGFALGAGPRNTLAQLQMQVDKLNPQANWQPQPPPPPWTWYQSVRLQRTVPGSLQG
GGSPSQSMLPQPGRRFMPPPTNHVSPTSSLPSPGFPPQPLRGMGGSSSYQPKAVDVFSSS
PLYAHVAPPPVNAGVSSPQSRQTIETTYLSGRNDPGGPVYVLKPNFPLGLPPALLHRNAQ
GQQNSLEYAAVSQEEKPGTVTWKPPETQQAVGSAVKRRRRSSPGPIIVIKDEPDDDSSYV
QANQRASLPDSTGDQGEGSKARPPLQSTDDKPHSHPRPPSSPRDQNETNTPDPVRSLGRD
KQVDQRPAPLEDPDGGACAACQTGGELLCCDKCPKVFHLSCHVPALLESPPSGEWFCSLC
RDLLAPEMEYDCESKPEAKTLKKEPDSDGGFPPVDKRKCEKLLLHLFCGALSSASLGPES
PSVCANNRLPMKRLLNLSAVKKRLEAKTSLCYQSPAEFVSDIRLLFGNCAALSEVDTEVT
TADRALQELFEEHLGIMFPQQTFPGIKLETIPPAPAGSQPSSLDNTSPRAKRQRACSDSQ
DTASRPGGEVGGVA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgcgtggacaaacgggagaccggggacgccgcagcctgcgccgtcgagaac
gaggctgagagcaagcaggtgcgaggggaagagtccggcgcgagcgctgcaaaccacctg
gacacgtgccccgtttgccacctgaactttcccagccgagagccccaacttctgccgtgc
ctgcactccttttgcaagaaatgtctgccttcgccctcgaggaacttggccatggcggag
cctccaaactcgcaggtggacagcgcgaccaaaccactgaatgtgatgcgctgtccggtg
tgcaggcaggagtgcatggaggtggacgtgatggaaaacgtctttgtgaaggactgcgcg
gaggctcccagcagcaccgtggagaggacagtccagctctgtatgacctgcgatgacaac
acggaagcggccgggttttgcgtggagtgtgtggagtacctctgcgccacctgcgtggag
gcccaccagagggtcaaatttaccaaagaccacgccatcaggcacaaggaggaagtctcg
cacgaggcccccggcgcgtctgctcagaggccggttttctgcgacatccacaaacaggag
ccgctgaagctgttctgcgagacctgcgacctcttgacctgccgtgactgccagctagta
aagcacaaggaccacaattaccagttcctggaagatgcttataaaagccacaagcagcac
atggagagcatgacccatcagctgcaggagaaaaataaacagattgaagaggtatcgaac
tccataaacagaggacttcttcaagtgaatcagaaccgcacgtccgttcataacgaaata
aagaaatccatctgcagtttgattctcgagataaacaagaagggcaagatgctggttaat
caactggagactgtaacaaaggatcacgagagtgtcctgcgaaaacaacaggaggacatc
ggctacctctccagacacctgaaccacgtcatcaacttcaccaaatgggccacggccagg
aacggaggcacggccctcttgtactgtaaacgtctgattctgtttcagattggaaacctc
ctgcgggcaaaatgtagtacgtcgtttattccacagagcactgtgcgcttccagagtcga
tcctcctattgggcctcaaatgttgatttgggctctttggtggtagagagtgtaccgggc
catcagctgggtggttttcagggtatcccacaccagctctcccaccctgggcacggcccc
tcaggctcaccccacggctttgccctgggagcggggccccgtaacactctggctcagctc
cagatgcaggtggacaagctgaacccgcaggccaactggcagccccaaccgcctccaccg
ccctggacgtggtaccagagtgtccgactgcagcgaaccgtcccggggtccctgcaagga
ggtggctctccctcccagagtatgcttccccaacctggtcgcaggtttatgccgcctccc
accaaccacgtcagcccgactagcagcttaccgagccccgggttcccaccacagccgctg
agggggatgggcggcagctccagctaccaacccaaagccgtggacgtgttttcctcctcg
cctctgtacgcccacgtagcaccgccgcccgtcaacgccggcgtcagctcgcctcaatcg
cgacagacgattgagacgacatatctgagcgggaggaatgatcccggcggtccggtgtat
gtgctgaaacccaactttcccctcggcctgccgcctgcgctgctgcacagaaatgcacaa
ggacagcagaattcactagagtacgctgctgtatcccaggaggagaaaccggggactgtt
acctggaaacctccagaaacacagcaggcagtgggctcggctgtcaagagaagacgaagg
tcgtcaccgggacccatcattgtcatcaaagatgagcccgatgacgacagtagctacgtc
caagccaaccaaagagccagcctccccgacagcacaggagaccaaggcgaggggagcaaa
gcccggcctcctcttcaaagcacggacgacaaaccccacagccatccccggcctccgagc
agcccccgggaccagaatgagacaaacactccggatcccgtccgctccctgggacgagac
aagcaggtagaccagcgcccggctccgcttgaagaccctgatggaggcgcgtgtgccgcg
tgtcagaccgggggggagctgctgtgctgcgataagtgtcccaaggtttttcacctctcg
tgccatgttccagctctcctcgaatctcctcccagcggcgaatggttttgctctctctgc
cgcgacctgctagcgcccgagatggagtatgactgcgaaagcaaacccgaagccaaaaca
ctaaagaaggagccagattctgacggaggatttccccctgtggacaaacgaaagtgtgag
aagctgttgctgcacttgttttgcggcgcactgagttccgcctccctggggcccgaatcc
ccctcggtatgtgctaataacaggctgcctatgaagagactattgaatctttccgctgtg
aaaaagcgactggaggctaagacgagtctgtgctaccaaagccctgcagagtttgtatca
gacatccggctcctctttgggaactgcgcagccctcagtgaggtcgacacggaggtcacc
acggcagacagggcgctccaagagctgtttgaagagcacctggggatcatgttccctcaa
cagacctttccaggaatcaaactggagacgatacctccggcccccgccggctctcaaccc
tcgtctcttgacaatacatccccgcgtgcaaagcgccagcgagcatgttcagactcccag
gatacggcgagccgtcccggtggagaggtggggggcgtagcgtga
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