KEGG   Cyclopterus lumpus (lumpfish): 117732533
Entry
117732533         CDS       T09199                                 
Name
(RefSeq) striatin-like isoform X1
  KO
K17608  striatin 1/3/4
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117732533
Protein phosphatases and associated proteins [BR:clum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     117732533
SSDB
Motif
Pfam: WD40 Striatin WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_Nup120_160 PEP5_VPS11_N WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 117732533
NCBI-ProteinID: XP_034391432
Ensembl: ENSCLMG00005011651
LinkDB
Position
1:23160447..23199740
AA seq 820 aa
MDEQAGPGVFFNSGGGGGGGGGGGIGGVGGSPGGANIKAPQTTGDVGGGEAARAQYNIPG
ILHFLQHEWARFEVDRAHWEVERAELQAQIAFLQGERRGQENLKNDLVRRIKMLEYVLKQ
ERAKYHKTKYGTELNQGEIIPPSYDSDEGNDSEAPSPPNSSHQLSWKQGRQLLRQYLQEV
GYTDTILDVKSQRVRALLGLTGDSGEKPPERRAEPMVNGTEPSSPKDDVVGGKPDMSDSA
SALEAFKFIESAAAEFSDEDEEEEEEEEDSEGRDRSMLHLATVRPEHTGDLPVTLTITEM
VRKKHSSTPSSTTSDLSDDPDTEEALKGFDFLASPDELDGSPESRSGEDSGEWEKEESPQ
GEVAWDVDQGLIAQLKEQYRKERKGKKGVKRPNRSRLQDMLANLREGEEPPLQPPVTPPS
RPSVPRLNEQEAGRPDDEAMTFLPSNGKSFILGRVDEAVSNELGLGELAGLTVANEADSL
AYDITNNTDALRKTWNPKFTLRSHFDSVRGLAFHPVEPVLVTASEDHTLKLWNLQKTAPA
KKCAALDVEPIYTFRAHSGAVLCVTMSSSGEQCFSGGVDGTIQSWNTPNPNIDPYDSYEP
SVLRGALCGHTDSVWGVVYSSAHQRLLSCSADGTVRLWNAADTSPSLAVFNERGELGVPT
SVDLVSSDPAHMVTSFTSGHIGLFNMETQQLVLKLESAGPPEAPCKINKVLSHPTLPITI
TAQEDRHIQFFDNNTGKLIHSMVAHLDSVTCLAVDPNGLYLMSGSHDCSVRLWNMETKTC
IQEFTAHRKKSEESIHDVAFHPTKCYIGSAGADALAKVFV
NT seq 2463 nt   +upstreamnt  +downstreamnt
atggacgagcaggcgggccccggtgtcttcttcaacagcggcggaggaggcggcggcggc
ggcggcggcggcattggaggcgtcggcggttcgcccggcggtgcgaacatcaaagcgccg
cagactaccggcgacgtcgggggcggagaggcggcccgggctcagtacaacatcccgggg
attttacactttctccagcacgagtgggcccgcttcgaggtggaccgcgcgcactgggag
gtcgagcgggccgagctgcaggctcagatagccttcctgcagggggagaggcggggccag
gagaacctgaagaacgacctggtgagacggatcaagatgctagagtacgtcctcaaacag
gagagggccaaataccacaagacgaagtacggcacggagctgaaccagggagagatcatc
cctcccagttatgactcagatgaggggaatgacagtgaggctcccagtcctccaaacagc
agccatcagctcagctggaaacaaggacgccagctgctcagacaatacctgcaggaagtg
gggtacacagacaccatcctggatgtgaagtctcagcgagtgagagcgctgctcggtctg
accggcgactcgggggagaaacctccggagaggagagccgaaccgatggtcaacggcacc
gagccgtcctcgccgaaggacgacgtggtgggcggcaaacccgacatgtcggactcggcc
agcgcgttggaggccttcaagttcatcgagagcgctgcagcagagttcagcgacgaggac
gaggaggaggaggaggaagaggaggacagcgaagggcgggacaggagcatgttgcacctg
gctacagtaagacctgaacacaccggtgacctcccagtgaccttgaccatcacggaaatg
gtgaggaagaagcattcgtccaccccttcctccacgacctccgacctcagcgacgacccc
gacacggaggaggcgctgaaggggttcgatttcctggcgagtccagacgagctggacggg
tcaccggagtccaggagtggggaggacagcggagagtgggagaaggaagagtctcctcag
ggggaagtggcctgggacgtggaccagggactgatagcccagctcaaggagcagtacagg
aaggaacgcaagggcaagaagggggtgaagaggccaaaccggtcccggctccaggacatg
ctggctaacctgcgggagggggaggagcctcccctgcagccgccggtgacgcccccctcc
cgtcccagtgttcccagactgaatgagcaagaagcggggcgccctgacgacgaggcgatg
acgttcctgccgtccaacgggaagtcgttcatactgggcagagtggacgaggcggtttct
aacgagctgggactgggagaactggccggactgacggtcgccaacgaggccgacagcctg
gcgtacgacatcaccaacaacacggacgctctgaggaaaacctggaaccccaagttcacc
ctgcggagccacttcgactcggtccgcggtctggccttccacccggtggagccggtcctg
gtcacggcctccgaggatcacaccctcaagctgtggaacctccagaagacggcgcccgcc
aagaaatgtgccgctctagacgtggagcccatctacacgttcagagctcacagcggcgcc
gtgctgtgcgtcaccatgagctcgagcggtgagcagtgcttcagcggcggggtggacggt
accatccagagctggaacacccccaaccccaacatcgacccctacgactcgtatgagccc
tccgtcctgcggggggcgctgtgcggtcacacggactcggtgtggggcgtggtctacagc
tccgcccaccagcgcctcctctcctgctcggccgacgggacggtccggctgtggaacgcc
gccgacacctcgccgtctctcgccgtgttcaacgagagaggagagctcggcgtgccgacg
tcggtggacctggtgagcagcgacccggctcacatggtgacgtccttcaccagcggccac
atcgggctcttcaacatggagacgcagcagctggtcctgaagctggagtctgccggaccg
ccagaagctccctgcaagatcaataaagtgctgagtcaccccacgctgccaatcaccatc
acagctcaggaggaccggcacatccagttcttcgataataacacaggtaaactgatccac
tcgatggtcgctcacctggactcggtcacgtgtctcgccgtggatccaaacggactttac
ctcatgtctggaagtcacgactgctccgtccgcctgtggaacatggagaccaagacctgc
atccaggagttcaccgcccaccgcaagaagtccgaggagtcgatccacgacgtggcgttc
caccccaccaagtgctacatcggcagcgccggcgccgacgcgctcgccaaggtcttcgta
tga

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