KEGG   Cyclopterus lumpus (lumpfish): 117732546
Entry
117732546         CDS       T09199                                 
Symbol
lsm14aa
Name
(RefSeq) LSM14A mRNA processing body assembly factor a
  KO
K18749  protein LSM14
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117732546 (lsm14aa)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117732546 (lsm14aa)
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 117732546
NCBI-ProteinID: XP_034391449
Ensembl: ENSCLMG00005021862
UniProt: A0A8C3GB98
LinkDB
Position
6:471767..495020
AA seq 473 aa
MSGGTPYLGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDD
TFEYIIFRGSDIKDLTVCEPPKPPCSLPQDPAIVQSSMSSSSSSSTAPPTPFQSAGSYGL
FNRAPVPAYNQFSTSPLVSPQFGPVGVGRSSPSLDPLRKSPTLEQVIQSAPNTATTALAP
GLGRRSPAHGRTAPTTGGQKVQHQDGVDTRRGEPVRGGRNSHSWSAPRTISSSHITAADR
TPSAGLTHSVFSHPVSAVAPANRRGRGGGHRGRGRFNVRRDGPMKFEKDFDFESANAQFN
KEEIDREFQSKLKLKDEKTEKAEKTLNGEEKTDSGVETQTSEGPAQEEGDQLGPNCYYDK
SKSFFDNISCDDTRKANEKSGVSGFPRERRQTWAEERRMNAETFGIPLRHGRGRGGYRGR
GGMGFRGGRGRSASRGSFGPPQGGGFRGGYRGNQAGREFADLSAYRKDNKVLA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgagcggcgggaccccgtacctgggcagcaagatcagcctgatctccaaagccgagatc
cgctatgaaggaatcctgtacaccatcgacacggagaactccaccgtggctctggcgaaa
gtgcgctccttcggcacagaggaccggcccaccgatcgtcccattcctcctcgagacgac
acctttgagtacatcatctttagaggcagcgacattaaggacctgacggtgtgcgagccg
cccaaacccccttgctccctcccccaggacccggccattgtgcagtcgtccatgagctcc
agctcctcgtcctccaccgccccccccaccccgttccagtctgctggctcctacggactc
ttcaaccgtgctccggttccggcctacaaccagttcagcaccagccccctggtgtcgcct
cagtttggacccgttggtgttggacgcagcagccccagcctggaccctttaaggaagagc
cccaccctggagcaggtgatccagagcgccccgaacaccgccaccacggctctggcaccc
ggcctggggcgcagaagccccgcccacggtcgcacggcccccactaccggtggtcagaag
gtccagcaccaggacggcgtggacacgaggaggggggagccggtcagggggggacgcaac
agccacagctggtctgcaccccgaaccatctcgtcctctcacatcactgctgcagatagg
actccctctgcaggactcacccattctgtcttcagccacccagtgtctgccgtagctccg
gctaaccggcgtggtcgggggggcggacaccgtggcagaggacgcttcaacgtccgccga
gacggacccatgaagtttgagaaggactttgactttgagagcgccaacgcccagttcaac
aaggaggagatcgaccgagagttccagagcaaactgaagctgaaagatgagaagacggag
aaagcagagaagacgttgaatggagaggagaagaccgactctggagtggaaacccagacc
agcgaaggaccggcacaggaggagggcgaccagttgggccccaactgttactatgacaag
tccaagtccttcttcgacaacatctcctgtgatgacaccaggaaagctaatgagaagtct
ggagtctccgggttccctcgggagcggaggcagacctgggcggaggagaggaggatgaac
gccgagacgttcggcatcccgctccgtcacggtagaggacgtggaggttaccgtggacga
ggaggaatgggcttccgaggaggtcgaggtcgctcggcaagccgaggctccttcgggccg
ccgcagggaggaggcttcagaggaggctaccgtggaaaccaggccggcagggagtttgca
gacctatcagcatacaggaaggacaacaaagtgttggcgtag

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