Cyclopterus lumpus (lumpfish): 117732551
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Entry
117732551 CDS
T09199
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117732551 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117732551 (rbm28)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117732551 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117732551
NCBI-ProteinID:
XP_034391455
Ensembl:
ENSCLMG00005005125
LinkDB
All DBs
Position
6:complement(14082417..14089322)
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AA seq
795 aa
AA seq
DB search
MPARTLYVSPLPAAASNERLEEIFSEIGPVKQCFVVTEKGSDKCRGFGYVTYSMEEDSQR
ALKEVKLYDGQRLSVTVAKRKIKDKKKTAPEEPAAAPKEKDAAPKEKDAAPKKKDSAPKK
KDAAPKENEQNKSVKKINLKPRLIIRNLSFKCSEDDLKQILSKFGTVLEAKIPLMPDGKM
RGFAFVLFQNVLEAGNALHAMNLKEIKGRQVAIDWAVPKDKFIATQPPSSAGNKIIEANT
KKSGAKIDTEDKEEEKPHAAPEKKRVPSKPSVKQVEESQSDDDDDASEDQDSEEEEEDEE
DEDSDMGEDEDDMSQEEEDGSDDDKSSFDSNDDEEEDEDTEADKSAKKKTSKKLLPSDVK
EGRTIFIRNLSFDTEEDGLEEVLLKYGELNYIKIVIHTETGHSKGCAFAQFKTKEAADKC
MAAAEDEAQNGGIRVDGRKLFVVAAVTRDDASKLKVDKVKVETGTRNIYLAREGLIRAGT
KAAESVPEAEMAKRTRFEEIKRTKLRALNVFVSKTRLCVHNLPKSVDDKKLRALCLPAVQ
GGTGVRITECRVMYDKKPEKGQAMGQSLGYGFVQFQVHEHALSTLRYLNNNPDIFGSHKR
PIVEFSLEDSRKLQMKEMRQQKNKEQSLSFKRAAKPQPQTVGEGKGPSKGGNKAQSSSEQ
TINESAPVQTQEQRNRYFGFQTKPEFEHVNLENGKKRRKILNFPSHRGPKIRMRDKGKQQ
APPPKKAKPGSNRKDRQRQQMEKPTQRNNQVKTPKKHFKRGGGDRFDSLVEQYKKKLMGN
SDNSTNVKRNKWFDS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacggaccttgtacgttagccccctgccagctgcagcttcaaatgaacgactt
gaggaaatattctcggaaattggtccggtaaagcaatgcttcgtggtcaccgagaaaggc
tcggacaaatgtcgggggtttggctatgtcacatattccatggaggaagactcacagcga
gctttgaaagaagtaaagctctacgacggacaaaggctttctgttacagtggcgaagagg
aaaattaaggacaaaaaaaaaacagcgcctgaagagcccgctgcagcaccaaaagaaaaa
gatgcagcaccaaaagaaaaagatgcagcaccaaaaaaaaaagattctgcaccaaaaaaa
aaagatgctgcaccaaaagaaaacgagcagaacaaaagcgtcaagaaaatcaatctgaaa
cccagactcatcatcaggaatctgagttttaagtgctcagaagatgacctgaaacaaatt
ttatccaagtttggaaccgttcttgaggccaaaattcccctcatgccagatggaaagatg
cgcggatttgcgtttgttctttttcaaaatgtcttggaggcagggaacgcgcttcatgct
atgaacctgaaggagataaaaggtcggcaggtagcaattgactgggctgtgcctaaggac
aaatttatcgccacacagccgccatcaagtgcaggaaataaaattatagaagcaaataca
aaaaagtcaggtgcaaagattgacactgaagacaaggaagaagaaaagccacatgcagca
cctgaaaagaaaagagtcccttccaaaccatctgtaaagcaggtggaagaatcccaatct
gatgatgatgatgatgctagcgaggaccaagacagtgaggaggaagaggaggatgaagaa
gatgaagattcagacatgggggaggatgaggatgatatgtctcaggaagaagaggacggc
agtgacgacgataagagtagctttgattcaaacgatgatgaagaggaagacgaggacacc
gaagcagataaatcggctaaaaagaaaacctcaaagaaacttctcccttcagatgtgaag
gagggcagaacaattttcatcaggaacctttcctttgataccgaagaagacggtcttgag
gaagttctgttaaaatacggagagcttaactacattaagattgttatccacacagaaaca
ggacattcaaaaggttgtgcatttgctcagttcaagactaaagaggctgcagataaatgc
atggcagcagcagaggatgaggcacagaacggtggcatccgtgtcgatggcagaaagctg
ttcgttgtggccgcagtgaccagagatgacgcttccaagctgaaagtggacaaagtgaaa
gtggaaacgggcaccaggaatatatatttggccagagagggattgatccgggctggaacc
aaagctgcagagagtgttcctgaagcagaaatggcgaaaagaaccagatttgaagaaata
aagaggaccaagcttcgggccttaaatgtgtttgtgtcaaagactcgtctgtgtgtccat
aacctgcctaagtcagtggacgataaaaaactcagagcactctgcctcccagcagtacaa
ggaggcacgggagtccgcatcacagagtgccgagtgatgtatgacaagaagccagagaag
ggtcaggcgatgggacaatcattaggttatggatttgtccagttccaggtccatgaacat
gctctcagcacacttcgttaccttaacaacaaccctgacatctttggctcacacaagaga
cctattgttgagttctccctggaggattctaggaaactccaaatgaaagaaatgcgccaa
caaaaaaacaaggaacaaagtctgtcttttaaaagagcagcaaaacctcagccccagaca
gtcggagaaggaaaaggtcccagcaaaggtggaaataaagcccagtcctcatcagagcag
acaataaacgagagcgctcctgttcaaacccaggagcaacgcaaccgctattttggcttc
cagaccaaacccgagttcgaacacgtgaatttggaaaacggaaagaaacgaagaaagatt
ctaaactttccatcccatcgcgggcctaagatcagaatgcgtgacaagggaaagcagcag
gcgccgccacccaagaaagcaaagcctggatccaacaggaaagaccgtcaaagacaacag
atggaaaagcccacacagcgcaacaaccaggtcaaaaccccaaagaagcatttcaagaga
gggggtggggaccgttttgacagcctggtggagcagtacaagaagaaactgatgggtaac
agtgacaacagcaccaatgtcaaaagaaacaagtggtttgatagttag
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