KEGG   Cyclopterus lumpus (lumpfish): 117732551
Entry
117732551         CDS       T09199                                 
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
  KO
K14573  nucleolar protein 4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117732551 (rbm28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:clum03009]
    117732551 (rbm28)
Ribosome biogenesis [BR:clum03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    117732551 (rbm28)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 117732551
NCBI-ProteinID: XP_034391455
Ensembl: ENSCLMG00005005125
LinkDB
Position
6:complement(14082417..14089322)
AA seq 795 aa
MPARTLYVSPLPAAASNERLEEIFSEIGPVKQCFVVTEKGSDKCRGFGYVTYSMEEDSQR
ALKEVKLYDGQRLSVTVAKRKIKDKKKTAPEEPAAAPKEKDAAPKEKDAAPKKKDSAPKK
KDAAPKENEQNKSVKKINLKPRLIIRNLSFKCSEDDLKQILSKFGTVLEAKIPLMPDGKM
RGFAFVLFQNVLEAGNALHAMNLKEIKGRQVAIDWAVPKDKFIATQPPSSAGNKIIEANT
KKSGAKIDTEDKEEEKPHAAPEKKRVPSKPSVKQVEESQSDDDDDASEDQDSEEEEEDEE
DEDSDMGEDEDDMSQEEEDGSDDDKSSFDSNDDEEEDEDTEADKSAKKKTSKKLLPSDVK
EGRTIFIRNLSFDTEEDGLEEVLLKYGELNYIKIVIHTETGHSKGCAFAQFKTKEAADKC
MAAAEDEAQNGGIRVDGRKLFVVAAVTRDDASKLKVDKVKVETGTRNIYLAREGLIRAGT
KAAESVPEAEMAKRTRFEEIKRTKLRALNVFVSKTRLCVHNLPKSVDDKKLRALCLPAVQ
GGTGVRITECRVMYDKKPEKGQAMGQSLGYGFVQFQVHEHALSTLRYLNNNPDIFGSHKR
PIVEFSLEDSRKLQMKEMRQQKNKEQSLSFKRAAKPQPQTVGEGKGPSKGGNKAQSSSEQ
TINESAPVQTQEQRNRYFGFQTKPEFEHVNLENGKKRRKILNFPSHRGPKIRMRDKGKQQ
APPPKKAKPGSNRKDRQRQQMEKPTQRNNQVKTPKKHFKRGGGDRFDSLVEQYKKKLMGN
SDNSTNVKRNKWFDS
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgcctgcacggaccttgtacgttagccccctgccagctgcagcttcaaatgaacgactt
gaggaaatattctcggaaattggtccggtaaagcaatgcttcgtggtcaccgagaaaggc
tcggacaaatgtcgggggtttggctatgtcacatattccatggaggaagactcacagcga
gctttgaaagaagtaaagctctacgacggacaaaggctttctgttacagtggcgaagagg
aaaattaaggacaaaaaaaaaacagcgcctgaagagcccgctgcagcaccaaaagaaaaa
gatgcagcaccaaaagaaaaagatgcagcaccaaaaaaaaaagattctgcaccaaaaaaa
aaagatgctgcaccaaaagaaaacgagcagaacaaaagcgtcaagaaaatcaatctgaaa
cccagactcatcatcaggaatctgagttttaagtgctcagaagatgacctgaaacaaatt
ttatccaagtttggaaccgttcttgaggccaaaattcccctcatgccagatggaaagatg
cgcggatttgcgtttgttctttttcaaaatgtcttggaggcagggaacgcgcttcatgct
atgaacctgaaggagataaaaggtcggcaggtagcaattgactgggctgtgcctaaggac
aaatttatcgccacacagccgccatcaagtgcaggaaataaaattatagaagcaaataca
aaaaagtcaggtgcaaagattgacactgaagacaaggaagaagaaaagccacatgcagca
cctgaaaagaaaagagtcccttccaaaccatctgtaaagcaggtggaagaatcccaatct
gatgatgatgatgatgctagcgaggaccaagacagtgaggaggaagaggaggatgaagaa
gatgaagattcagacatgggggaggatgaggatgatatgtctcaggaagaagaggacggc
agtgacgacgataagagtagctttgattcaaacgatgatgaagaggaagacgaggacacc
gaagcagataaatcggctaaaaagaaaacctcaaagaaacttctcccttcagatgtgaag
gagggcagaacaattttcatcaggaacctttcctttgataccgaagaagacggtcttgag
gaagttctgttaaaatacggagagcttaactacattaagattgttatccacacagaaaca
ggacattcaaaaggttgtgcatttgctcagttcaagactaaagaggctgcagataaatgc
atggcagcagcagaggatgaggcacagaacggtggcatccgtgtcgatggcagaaagctg
ttcgttgtggccgcagtgaccagagatgacgcttccaagctgaaagtggacaaagtgaaa
gtggaaacgggcaccaggaatatatatttggccagagagggattgatccgggctggaacc
aaagctgcagagagtgttcctgaagcagaaatggcgaaaagaaccagatttgaagaaata
aagaggaccaagcttcgggccttaaatgtgtttgtgtcaaagactcgtctgtgtgtccat
aacctgcctaagtcagtggacgataaaaaactcagagcactctgcctcccagcagtacaa
ggaggcacgggagtccgcatcacagagtgccgagtgatgtatgacaagaagccagagaag
ggtcaggcgatgggacaatcattaggttatggatttgtccagttccaggtccatgaacat
gctctcagcacacttcgttaccttaacaacaaccctgacatctttggctcacacaagaga
cctattgttgagttctccctggaggattctaggaaactccaaatgaaagaaatgcgccaa
caaaaaaacaaggaacaaagtctgtcttttaaaagagcagcaaaacctcagccccagaca
gtcggagaaggaaaaggtcccagcaaaggtggaaataaagcccagtcctcatcagagcag
acaataaacgagagcgctcctgttcaaacccaggagcaacgcaaccgctattttggcttc
cagaccaaacccgagttcgaacacgtgaatttggaaaacggaaagaaacgaagaaagatt
ctaaactttccatcccatcgcgggcctaagatcagaatgcgtgacaagggaaagcagcag
gcgccgccacccaagaaagcaaagcctggatccaacaggaaagaccgtcaaagacaacag
atggaaaagcccacacagcgcaacaaccaggtcaaaaccccaaagaagcatttcaagaga
gggggtggggaccgttttgacagcctggtggagcagtacaagaagaaactgatgggtaac
agtgacaacagcaccaatgtcaaaagaaacaagtggtttgatagttag

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