Cyclopterus lumpus (lumpfish): 117732554
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Entry
117732554 CDS
T09199
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5-like isoform X1
KO
K06467
CD22 antigen
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117732554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117732554
04090 CD molecules [BR:
clum04090
]
117732554
04091 Lectins [BR:
clum04091
]
117732554
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
SIGLEC family
117732554
CD molecules [BR:
clum04090
]
Proteins
117732554
Lectins [BR:
clum04091
]
I-type lectins (Siglecs)
117732554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_5
Ig_4
C2-set_2
Ig_CD22
Ig_6
PKD
Motif
Other DBs
NCBI-GeneID:
117732554
NCBI-ProteinID:
XP_034391460
LinkDB
All DBs
Position
1:complement(24200053..24212537)
Genome browser
AA seq
810 aa
AA seq
DB search
MFPCLWYLCPEVFLTYLLMFQRGAAMSSTAAASGFVVFLLSAQVIQSQDGWGVTYTPPEL
CAVRGSAVELLCTYTHPSRIQPRDISNTLWFTEEEHGDPVDLEQDSEYAGRVEYRCSEKR
CSLRIKNLRESDSAEYKFMFMTNQPDEKYTGSPGVTLSVTDLQVKVSRSDSTLLELTCHS
SCVLPDHQTYDWYKNELKVWTRSSSSYFVSSGSPNKYSCGLSGLEDLRSPSVCPDLQVKV
SRSDSTLLELTCHSSCVLPDHQTYFWYKNELKIWTRSSYYSVSSGSPDKYSCGLSGLEGL
RSPSVYGPRLPSVSVSPSEIVEGSSVTLSCSSDANPAANYTWYKKNQPRPHGEEPQLVFS
SIQSSDSGQYLCEAENHLGKKRSEFISIDVKYGPKLPSVSVSPSEIVEGSSVTLTCSSDA
NPAASYTWYKKNQPRPHGQEPQLVFSSIQSSDSGQYLCEAENHLGTKRSKFISIDVKYGP
RLPSVSVSPSEIVEGSSVTLTCSSDANPAASYTWYKKNQPRPHGEEPQLVFSSIQSSDSR
QYLCEAENHLGKKRSEFISIDVKYGPRLPSVSVSPSEIVEGSSVTLTCSSDANPAASYTW
YKKNQPRPHGEEPQLVFSSIQSSDSGQYLCEAENHLGTKRSKFISIDVKYGPRLPSVSVS
PSEIVEGSSVTLTCSSDANPAANYTWYKEDEDSPTASGQIFIINDFRAEHSGSYSCEAQN
NRGRSTSTFHLTVADTTTMIIHITRLTLVVVVPVSLLLLCLWMRKKKALISTTEPHEPIE
TVELDLYPVYEDVSDMAAQTGDTEEQEDRV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttgtttatggtacttatgtcctgaagtgtttctgacctacctgctgatgttc
cagagaggagcagctatgagttcaacagcagcagccagtggatttgttgtcttccttctc
tctgcacaagtgatacagagtcaggatggctggggggtgacttacactcctcctgagctc
tgtgctgtaagagggtcagcagtggagctgctctgcacctacacacacccatctagaata
cagccccgtgacatcagcaacacattgtggttcactgaagaggaacatggtgaccctgtg
gatctggaacaagactctgagtatgcaggtcgtgtggagtacagatgttcagagaagaga
tgcagtctgaggatcaagaacctgagagagagcgactcagctgagtacaagttcatgttc
atgaccaaccaaccagacgagaaatatactggttcacctggagtcactttgtctgtcaca
gatctccaggtgaaggtgagcaggtcagattctaccttgttggagctgacgtgtcacagc
agttgtgttctgcctgatcatcagacctacgactggtacaagaatgaactgaaagtctgg
acaagatcttcgtcttcttattttgtctcctctggttcaccaaacaaatattcttgtggt
ctaagtggacttgaggatcttcgttctccttcagtgtgtccagacctccaggtgaaggtg
agcaggtcagattctaccttgttggagctgacgtgtcacagcagttgtgttctgcctgat
catcagacctacttctggtacaagaatgaactgaaaatctggacaagatcttcttattat
tcagtctcctctggttcaccagacaaatattcttgtggtctaagtggacttgagggtctt
cgttctccttcagtgtatggtccaaggcttccctctgtgtcagtgagtccctctgagata
gtggagggcagttcagtgactctgagctgtagcagtgatgctaacccagcagctaactac
acctggtacaagaagaaccaaccacgtcctcatggagaagaacctcagcttgtcttcagc
tccatccagtcctctgactctggacagtatttatgtgaagctgagaaccatctggggaag
aagagatctgaattcatctctattgatgtgaaatatggtccaaagcttccctctgtgtca
gtgagtccctctgagatagtggagggcagttcagtgactctgacctgtagcagtgatgct
aacccagcagctagctacacctggtacaagaagaaccaaccacgtcctcatggacaagaa
cctcagcttgtcttcagctccatccagtcctctgactctggacagtatttatgtgaagct
gagaaccatctggggacgaagagatctaaattcatctctattgatgtgaaatatggtcca
aggcttccctctgtgtcagtgagtccctctgagatagtggagggcagttcagtgactctg
acctgtagcagtgatgctaacccagcagctagctacacctggtacaagaagaaccaacca
cgtcctcatggagaagaacctcagcttgtcttcagctccatccagtcctctgactctaga
cagtatttatgtgaagctgagaaccatctggggaagaagagatctgaattcatctctatt
gatgtgaaatatggtccaaggcttccctctgtgtcagtgagtccctctgagatagtggag
ggcagttcagtgactctgacctgtagcagtgatgctaacccagcagctagctacacctgg
tacaagaagaaccaaccacgtcctcatggagaagaacctcagcttgtcttcagctccatc
cagtcctctgactctggacagtatttatgtgaagctgagaaccatctggggacgaagaga
tctaaattcatctctattgatgtgaaatatggtccaaggcttccctctgtgtcagtgagt
ccctctgagatagtggagggcagttcagtgactctgacctgtagcagtgatgctaaccca
gcagctaactacacctggtacaaggaggatgaagactcaccaacagcatcaggacagatc
ttcatcatcaatgacttcagagctgaacacagtgggagttattcctgtgaagcccagaac
aacagaggacgtagtacctccaccttccatctgaccgtagcagatacaacaacaatgata
atccatatcaccaggttgactctggtggtcgtggtgccggtttctctgcttcttttgtgt
ctgtggatgaggaagaagaaagctctgatctccaccactgaaccacatgaacccatagag
actgtggagttagacctttatcccgtgtatgaagacgtctcagacatggcagcacagaca
ggagacaccgaggagcaggaagaccgggtgtga
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