Cyclopterus lumpus (lumpfish): 117732638
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Entry
117732638 CDS
T09199
Symbol
c6h16orf70
Name
(RefSeq) UPF0183 protein C16orf70 homolog isoform X1
KO
K27411
phagosome assembly factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117732638 (c6h16orf70)
Membrane trafficking [BR:
clum04131
]
Autophagy
Other autophagy associated proteins
Others
117732638 (c6h16orf70)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
117732638
NCBI-ProteinID:
XP_034391588
Ensembl:
ENSCLMG00005003289
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All DBs
Position
6:20796871..20810922
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AA seq
427 aa
AA seq
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MLDLEVVPERSLGNEQWEFALGMPLAQAISILQKHCRIIKNVQVLYSEQTPLNHDLILNL
TQDGIKLLFDATNQRLKVIEVYDLSKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWNEAPKYEPNFAMGLASLQIPHGAMVKRMHIYTGNNLQ
ETRAPVMPLACFLGNIFAESVDVLRDGAGPLGLKLHLLTAGCGPGVMADAKVRSLERSIY
FGDSCQDVLGALGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDSA
THLVKKFVLHTNYPGHYNFNIYHRCDFKIPLVIKKEGADSQTEDCMLTTYSKWDQIQELL
GHPMEKPVVLHRSSSANNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGAHRTTSQARP
ESSSSSH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctggacctggaggtggtgcctgagagatcactaggaaatgagcaatgggaatttgcc
ttagggatgccattggcccaggccatctctattctgcagaaacactgccgcatcatcaaa
aatgtccaggtgctatacagtgaacagacaccactcaaccatgacctcatactgaacttg
actcaggatgggatcaaactgctgtttgatgccacaaatcagagactcaaggtgattgaa
gtgtatgacctgagcaaagtcaagttgaaatactgtggagtccatttcaactctcaggca
attgctcccacaatagagcaaatagaccagtcatttggagctacgcaccctggagtttac
aacgctgcagagcagttgttccatctcaactttcgaggcctgtctttctccttccagctg
gattcatggaatgaagctccaaaatatgagcctaactttgccatgggtttggcctccctg
cagattccacatggggccatggtcaagaggatgcacatctacactggcaacaacctgcaa
gaaacaagggctcccgtgatgccgttggcttgtttccttggtaacatctttgcagagagt
gttgatgtcctgagagatggtgcagggcctctggggctcaaactccaccttctcactgca
ggctgcggtccaggtgtgatggctgatgctaaagtgaggtccctcgaaaggagcatctac
tttggagattcctgtcaagatgtactgggtgctttgggctcgccacataaagtcttctac
aagtctgaggacaagatgaagatccactctccgtcaccccacaagcaggttccttctaaa
tgtaacgactacttcttcaactacttcaccctcggagtggatatcctgtttgactctgca
actcacctggttaagaagtttgtcctccataccaactaccccggccattacaacttcaat
atatatcatcgatgtgactttaagattccacttgtcattaagaaagaaggagccgattct
cagacagaggactgcatgttaacaacctacagcaagtgggatcagattcaggaactgctc
ggtcacccgatggagaaacctgtcgtgctccacagatcctcatcagccaataacaccaac
ccctttggctctaccttctgctttggactgcagaggatgatctttgaggtgatgcagaat
aaccacatagcatcagtgaccctgtatggtgctcatcggaccacaagtcaagctcgacct
gagtccagcagtagttcccactga
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