KEGG   Cyclopterus lumpus (lumpfish): 117732661
Entry
117732661         CDS       T09199                                 
Symbol
snupn
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117732661 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clum03041]
    117732661 (snupn)
Spliceosome [BR:clum03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    117732661 (snupn)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 117732661
NCBI-ProteinID: XP_034391622
Ensembl: ENSCLMG00005012267
UniProt: A0A8C2ZC78
LinkDB
Position
6:complement(5474153..5480955)
AA seq 373 aa
MDDLTQALSASFAVSKEPNSTAAAHPRLAQYKSKYSVLEQSERRRRFLELQKSKRLNYVN
HARRLADGDWTGADSDGEEDMEKKEEGEREKDGRTEDEGMEIERRKLPKHYANQLMLSEW
LVDVPSELDTDWVMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFFWLQSKVQETDGLSEIAKRNP
FRFVSLQSIDCTAEPIQKALAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVTDIL
GIEVPAGPLTAKPEYASQQLQQILEHKKTSSEVRPANSSGGYELEYLSTPYQDGGDPVNF
LNQKPIREATMEV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggatgacctgacccaagccctctcggccagcttcgctgtgtccaaggagcccaacagc
accgccgccgcccaccctcggctggcccagtacaagagcaagtacagcgtgctggagcag
agcgagcggcgccggcgcttccttgaactgcagaaaagcaaaagattaaactacgtcaac
cacgcgcggcgtctggctgatggggactggacgggggcagacagcgatggagaggaggac
atggagaaaaaagaggagggggaacgggagaaagacggccgcacggaggacgagggcatg
gagattgagaggaggaagctgccgaaacattatgcgaaccagctcatgctgtcagagtgg
ctggtggacgtgccgtcagaactggacactgattgggtgatggtggtctgtcctgtgggg
aaaagatctctcatcgttgcctccaagggctccaccgcggcgtacactaaaagcggctac
tgtgtgaaccgcttcccctccctgctgcccggtgggaaccgacacaactcggccatggga
aaagactacacgatcctggactgcatttacagcgaggtggaccgaacgtactacatcctg
gatgtcatgtgctggagaggccacccggtctacgactgcccgaccgagttccggttcttc
tggctccagtccaaagtccaggagacggacggcctatcggaaatcgccaagcgcaacccc
ttccggtttgtgagcctccaaagcatcgactgcacagcagagcccatccagaaagcccta
gctgccgagtacagcttcagcgtggacggtctgctcttctaccaccggcagacccactac
accccgggcagcacccctctggtgggctggctccgcccctacatggtgaccgacatcctg
ggcatagaggtccccgcgggacccctcaccgccaagcccgagtacgccagccaacagctg
cagcagatcctggaacacaaaaagacgtcgagtgaagtccgcccggccaacagtagcgga
ggctacgagttggagtacctgtccacgccataccaggacggcggggaccctgtgaacttc
ctaaatcaaaagcccataagggaagccaccatggaggtctga

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