Cyclopterus lumpus (lumpfish): 117732661
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Entry
117732661 CDS
T09199
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117732661 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117732661 (snupn)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
117732661 (snupn)
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GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
117732661
NCBI-ProteinID:
XP_034391622
Ensembl:
ENSCLMG00005012267
UniProt:
A0A8C2ZC78
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Position
6:complement(5474153..5480955)
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AA seq
373 aa
AA seq
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MDDLTQALSASFAVSKEPNSTAAAHPRLAQYKSKYSVLEQSERRRRFLELQKSKRLNYVN
HARRLADGDWTGADSDGEEDMEKKEEGEREKDGRTEDEGMEIERRKLPKHYANQLMLSEW
LVDVPSELDTDWVMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFFWLQSKVQETDGLSEIAKRNP
FRFVSLQSIDCTAEPIQKALAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVTDIL
GIEVPAGPLTAKPEYASQQLQQILEHKKTSSEVRPANSSGGYELEYLSTPYQDGGDPVNF
LNQKPIREATMEV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctgacccaagccctctcggccagcttcgctgtgtccaaggagcccaacagc
accgccgccgcccaccctcggctggcccagtacaagagcaagtacagcgtgctggagcag
agcgagcggcgccggcgcttccttgaactgcagaaaagcaaaagattaaactacgtcaac
cacgcgcggcgtctggctgatggggactggacgggggcagacagcgatggagaggaggac
atggagaaaaaagaggagggggaacgggagaaagacggccgcacggaggacgagggcatg
gagattgagaggaggaagctgccgaaacattatgcgaaccagctcatgctgtcagagtgg
ctggtggacgtgccgtcagaactggacactgattgggtgatggtggtctgtcctgtgggg
aaaagatctctcatcgttgcctccaagggctccaccgcggcgtacactaaaagcggctac
tgtgtgaaccgcttcccctccctgctgcccggtgggaaccgacacaactcggccatggga
aaagactacacgatcctggactgcatttacagcgaggtggaccgaacgtactacatcctg
gatgtcatgtgctggagaggccacccggtctacgactgcccgaccgagttccggttcttc
tggctccagtccaaagtccaggagacggacggcctatcggaaatcgccaagcgcaacccc
ttccggtttgtgagcctccaaagcatcgactgcacagcagagcccatccagaaagcccta
gctgccgagtacagcttcagcgtggacggtctgctcttctaccaccggcagacccactac
accccgggcagcacccctctggtgggctggctccgcccctacatggtgaccgacatcctg
ggcatagaggtccccgcgggacccctcaccgccaagcccgagtacgccagccaacagctg
cagcagatcctggaacacaaaaagacgtcgagtgaagtccgcccggccaacagtagcgga
ggctacgagttggagtacctgtccacgccataccaggacggcggggaccctgtgaacttc
ctaaatcaaaagcccataagggaagccaccatggaggtctga
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