Cyclopterus lumpus (lumpfish): 117732686
Help
Entry
117732686 CDS
T09199
Symbol
tshz3a
Name
(RefSeq) teashirt homolog 3 isoform X1
KO
K09236
teashirt
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117732686 (tshz3a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117732686 (tshz3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
Zap1_zf1
zf-C2H2
zf-C2H2_6
zf-C2H2_3rep
DUF7066
Motif
Other DBs
NCBI-GeneID:
117732686
NCBI-ProteinID:
XP_034391666
Ensembl:
ENSCLMG00005005737
UniProt:
A0A8C2WX60
LinkDB
All DBs
Position
6:18402905..18419675
Genome browser
AA seq
1116 aa
AA seq
DB search
MPRRKQEAPQRAPAYSPEELTEHTVEDEEAEADDLPTAPQDDLPMKDEFVEKSEGPAKEQ
TCDQESAGAAELSGQEMDSESHVSETSDRLSDFESPSRKAEGNLVTAPLNGGTKTPPIGM
DTLEQMKVIYSSFLTGPLWSPLNFNSTPPQAQTSTPPEKPARSNSTSSSCSSGSYDWHQS
AVAKTLQQQTPQSRHPAQSEHSLFSTVQLHRQNPKLFGSIFTGASKFRCKGCSAAYDTLV
ELTVHMNDTGHYRDDNHDRAGSGSKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESL
QDLSVHMIKTKHYQKVPLKEPMAPLAAKIMSSKKRGLLGLDLTAAPRSREGTPKAKHPQA
DLGEPPQKSSSSPYTTPNNRYGHQNGASYTWQFESNKFQILKCMECGSSHNTLQELRTHM
MVTGHFLRVTSSVGKRIKTLPEATSPNPVRVSTPHEQRVQSVPLAPSTFSPPPPQTTTSP
PATSPPLKDIKKEEVEEECSKQEAVRNEKRVAASVGKEEDAEKEEKYDVSKYSYLTEEDL
KESPKGGFDILKSLENTVTSAINKAQSGNPSWGGYPSIHAAYQFPSALKLQQGGMEKNSP
LKFLFNGGDGALSSLAQNQPLVSPPLSQSSPFPSNNFQAMEDLVKKVTEKVAKVEQRVKQ
LSPKMENHPSPCSSEAGESHKGGEADSPREWRAVTPANSDRGSHSDRASPATEPKRETAV
KSPLASMLRCSTAIITGHTPPEQPFVNPLSALQSVMNIHLGKAAKPSLPNQDPLSLLSRL
SQSMAERAAVAAPPSQTKKPESVVDNSFCQPSDDQPMDLTKGKSDRGGSVGSAPLTPSST
ASSISPSSLYTPAKLTVVSPYTSSSPLHENALSDISDMLRNLTQSHHVPKPPSRSRATDK
AEIVGSTHDDDEASLHGHKRKGRHSNWNPQHLLLLQAHFASSLKQTSEGKYIINDLSPQE
RMHVSRFTGLSMTTISHWLANVKYQLRRTGRTKFLKNLDSGQPIFFCSDCASQIRTPAAY
VCHLEAHLGFRIRDLAKLSPKQTARDSHTLSEKLVPLESFLSPQSQDDCNSNGGVFRCQL
CVRKFATKHAIKLHLSKSHGKSPEDHLLYVSEVEKH
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaggaaacaagaagcgccccagcgcgccccagcctattctccggaggagctg
acagagcacactgtggaggatgaggaggcggaagcagacgacctgcccacagcccctcag
gatgaccttcccatgaaagatgagtttgtggagaaaagcgaagggcctgccaaggagcag
acatgtgaccaggaatcagctggggcagcagagctctcaggacaagagatggacagcgag
tcacatgtgagtgagaccagtgaccgtctctcagactttgagagtccctcaagaaaagcc
gagggcaacttggtgacagcgcctctaaacggtggcactaaaacacctcccataggcatg
gataccttagaacaaatgaaggttatatactccagcttcttgaccggccccttgtggtca
ccgctgaactttaattccacaccgccacaggcgcagacgtcgacgccacccgagaagcca
gctcgcagcaacagcacgagtagtagctgcagcagcggtagctatgactggcaccagtct
gcagtggcaaagacactacaacagcagactccccagagccgtcaccctgcgcagtctgag
cacagcctcttcagtacagtccagctccacaggcaaaacccaaagctgtttggctcaatc
ttcaccggggccagtaagttccgctgtaagggctgcagtgctgcttatgacaccctggtg
gagctgacagttcacatgaatgatacaggccactaccgcgatgacaaccacgacagggca
ggcagtggctcaaagcgctggtctaagccacgtaagcggtccctgatggagatggagggg
aaggaggatgcccagaaagtcttgaagtgcatgtattgtggccactcctttgaatcactc
caggacctcagcgtccacatgatcaagaccaaacactaccagaaagtgcctctaaaggag
cccatggcgcccttggcagccaaaatcatgtcttctaagaaaagggggcttctgggattg
gatctcacggccgcaccacgttctcgagaaggaacccccaaagctaagcacccacaggca
gacctgggtgaacccccacagaaatcctcctccagcccctacacaacccctaataaccgc
tacggccaccagaacggtgccagttatacttggcagtttgaatccaacaaatttcagatc
ctcaagtgtatggagtgtgggagttcccataatacactgcaagagttgagaacccacatg
atggtgacaggacacttcctgagggtgaccagctctgtggggaagagaatcaaaacactt
cctgaggccacctcccccaaccctgttagggttagcacacctcatgaacagagggtccaa
tctgtcccactcgcaccctccaccttctcccctccacctcctcaaactacgacaagtccc
cccgctacctcccctcctcttaaagatatcaaaaaggaggaggtggaggaggagtgctcc
aagcaagaggctgtaagaaatgagaagcgagttgcagcgtcagttgggaaggaggaggat
gctgagaaggaggaaaaatatgacgtctcaaagtatagctatcttaccgaagaggatctg
aaggagagccctaaaggtggctttgatattctcaaatcactggaaaacactgtgacatca
gccatcaacaaggcacagagtgggaatccaagctgggggggctatcctagcatccacgca
gcctaccagttccccagtgccctcaagctccaacagggcggcatggaaaagaattcccca
ctgaagttcttgttcaacggaggggatggagcgctgtcttcccttgcccagaaccagccc
ctcgtttccccacctctaagtcagtcctcccccttccccagcaacaacttccaggcaatg
gaggatttagtgaaaaaagtgacagagaaagtagcaaaagtagagcaacgggtgaagcag
ttgtctccaaagatggagaaccacccctctccctgtagcagcgaggctggagaatcgcat
aagggaggagaggctgactcccctcgggaatggagggcggtcacgccagccaatagcgac
agaggaagccatagcgacagagcatccccggcaaccgaacccaagagagagacggcagtc
aaatccccgctcgcctctatgctgagatgcagtacagccattatcactggccatactcct
ccagagcagccctttgtcaaccctctaagtgctcttcagtcagtaatgaacattcatttg
gggaaagcagccaagccttccttgccaaaccaggatcccctgagcctgctctccaggctt
agccagagcatggctgagagggctgctgtggccgctcctccctcacaaaccaaaaagccg
gaaagtgtagttgataatagcttttgccagcccagtgatgaccagcctatggacctcact
aaagggaaaagtgatagagggggctctgtaggctcagcccccctaaccccttcatccacg
gcttcctccatctccccctcctccctttatactcctgcaaagctaacggttgtctctccc
tacacatccagcagccctctgcatgaaaacgcattgtcagatatctcagacatgctgagg
aacctgacacagtcccaccatgtcccaaagcctccctcgcggtcccgagccacagacaaa
gccgagatcgtgggctctactcacgacgacgacgaagcgtccctgcacggccacaaacgc
aaaggccgtcactccaactggaacccccagcacctcctcctcctgcaggcccactttgcc
tcgagcctgaagcagacatcagaggggaagtacatcatcaacgacctcagcccacaggaa
agaatgcatgtgtctcgtttcacaggcctctccatgaccaccatcagtcactggctggct
aacgtcaagtaccagctaaggagaactggcagaaccaagttcctcaagaatctggactcg
ggtcaacctatattcttctgtagtgactgcgcctcgcagatccgcaccccagcagcgtat
gtatgccacctggaagcccacctcgggttcagaatcagggacctggccaagctgtcccct
aaacagactgccagggactcccacactctctctgagaaactagtgcccctggagtccttc
ctttctccacaatcacaagatgactgcaatagtaatgggggggtgttccgctgccagctc
tgcgtccgtaaatttgccactaagcacgccatcaagcttcacctcagcaagagccatggg
aagtctccagaggaccatctgctatatgtgagcgaagtagagaagcactaa
DBGET
integrated database retrieval system