Cyclopterus lumpus (lumpfish): 117732730
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Entry
117732730 CDS
T09199
Symbol
pus10
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117732730 (pus10)
Enzymes [BR:
clum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
117732730 (pus10)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117732730 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
117732730
NCBI-ProteinID:
XP_034391747
Ensembl:
ENSCLMG00005015393
LinkDB
All DBs
Position
1:23778573..23784695
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AA seq
573 aa
AA seq
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MLTSNSALFSLCYFYFYFVTPPCPPGAMLPLKEKDKPVVRKLLSSGCCARCVLRFCCVTV
QAAYRKHPKDTLEELRAFVGDAENGEHRESVEGNGEARDAAVSEPPGDPPGDPPGDPPSK
RAKLEPVGTGAPSEEDNKAAAVEPKDEEPSVCVACLGILQELCGSTQAVKIAERVKAEKY
EFDTLLLSVSLPAQLCVREHSCWLHVKKEMREKSMAVDKDDVVQVKEAFKWIMQGLVAKE
LGGVAVVIRSLFEVGVEFTHPETDADCHFLASTCADCFRSNKNKRSVFTRMAVVKALEKI
SDAVFLKHYASPPAPTTSSCSPQNVQCLHMSLFVAGRYNKFSRSLPQTPWVIDGERRMES
SVEELIAAPVLSSFRADGFNFSSSGREDVDVRTLGNGRPFAMELLDPHRTKLSQVEMKQL
QETINNSSDKIRVRDLQIVSREAMSRMKEGEEDKTKSYTALVWTQKPIRSEDIAFIDDIK
DLTLDQKTPLRVLHRRALAVRQRVVHRMTARFLDPHHFYLELKTQAGTYIKEFVHGDFGR
TKPNMSVLLKMDTDILELDVESVDVDWPPSIPE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaagtaactcagccctgtttagtttgtgttacttctacttctactttgttact
cctccgtgtccgcctggagccatgctgccgctgaaggagaaggacaaacccgtcgtccgg
aagctgctgtcgtccggctgctgcgctcgctgcgtcctccggttctgctgcgtgaccgtc
caggccgcctacaggaagcacccaaaggatacgctcgaggaactccgggcgttcgtcggc
gacgcggagaacggcgagcaccgggaatcggtggaagggaacggcgaagcccgtgatgca
gccgtgtcagaaccacctggagacccacctggagacccacctggagacccaccgagtaaa
agggcaaagctggagcccgttgggaccggcgctccgtcggaggaagacaataaagctgct
gcggtcgaaccaaaggacgaagagccgagtgtgtgtgtggcgtgtttggggatcctccag
gaactctgtggctcgactcaggctgtaaagatagcggagagagtcaaggccgaaaagtac
gagtttgacaccctgttgctgtcggtgtctctgcctgctcagctgtgcgtccgcgagcac
tcctgttggcttcacgtgaagaaggaaatgagagagaagagcatggcggtggacaaggac
gacgtggtccaggtgaaggaggccttcaagtggatcatgcagggcctggtcgccaaggag
ctgggcggcgttgccgtggtgatcaggagtttgttcgaggtcggtgtggagttcacgcac
cccgagacggacgccgactgccacttcctcgcgtcgacgtgtgccgactgcttcagatcc
aacaagaacaaacggtcggtgttcaccaggatggcggtggtcaaagctctggaaaagata
tccgacgccgttttcctaaaacattacgcttctccaccagcgccgacgaccagcagttgc
agccctcagaacgtccagtgtctccacatgtccctcttcgtcgcagggaggtacaacaag
ttcagccgcagtctgcctcagacgccgtgggtgatcgacggcgagaggaggatggagtcg
tcggtggaggagctgatcgcggcgcccgtcctgtcgtccttcagagccgacggatttaat
ttctcctcgtcgggccgggaggacgtggacgtccggactcttggaaacggtcgcccgttc
gcgatggagctgctggatcctcacaggaccaaactgagccaagtggagatgaagcagctg
caggagaccatcaacaactcttcagacaaaattagggtgagagacctgcagattgtgtcc
agggaggccatgagccgcatgaaggagggggaggaggacaaaaccaagtcgtacacggcg
ctcgtctggacccagaaacccattcggagcgaagacatcgccttcatcgacgacatcaag
gatctgactctggaccagaagacccctctgagggttctgcaccggcgggcgctggcggtc
cgtcagcgggtcgtccaccgcatgaccgcccgcttcctggaccctcatcacttctacctg
gagctgaagacgcaggccggcacctacatcaaagagttcgtccacggagacttcggtcgc
accaaacccaacatgagtgttctgctgaagatggacacggacatcctggagctggacgtg
gagtctgtggatgtggactggcctccgtcgataccggagtga
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