KEGG   Cyclopterus lumpus (lumpfish): 117732750
Entry
117732750         CDS       T09199                                 
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
  KO
K05636  laminin, beta 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117732750 (lamb1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117732750 (lamb1a)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 117732750
NCBI-ProteinID: XP_034391791
Ensembl: ENSCLMG00005020415
LinkDB
Position
6:71044..122362
AA seq 1797 aa
MWELQLSVLLVLQVFIYAQDGGASGKSAQDDVSLPGFSDVCTEGSCYPATGDLLIGRAHQ
LSSTSTCGRNRPEPFCIVSHLQEEKKCFMCDSSSPYDVLRSPTSGHRIENVVTTFAPNRL
KTWWQSENGLENVTLQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQLYRYFAY
DCETSFPSVSQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNML
KITNLRVKFTRLHTLGDNLLDSRMEIKEKYYYAIFDMVVRGNCFCYGHASECAPIQEAGH
SSEGMVHGHCMCNHNTKGLNCEKCQDFYHDLPWRPAEGRDTNACKKCNCNQHSSSCHFDI
AVFVASGNISGGVCDGCQHNTAGHNCEQCQPFYYQHPERDVRDPNVCQSCDCDAQGSLSG
GTCDWTTDVRAGLIAGQCRCKDNVEGERCGRCKPAHYGMGDEPEGCKACSCSSVGTLPGG
NPCDSETGSCFCKRLVTGQDCDQCVSEHWGLSNDMDGCRPCDCDLGGAINNQCDQVSGQC
VCRDHMFDRRCDQVESGFYFIALDHYTYEAEDAKFGPGVIVVPRPHPLDRSPTWTGIGLV
NIPEGAFLEFSVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVPD
DDHQMISLHPGSRYVALPRPVCFESGLNYTVRLSLALYSALSDVLSPYTLIDSIVLMPHC
KNLEIFSDSVGDSSVNSGWETFQRYRCLENSQSIIKSPMTDICRNFIFSISAMLHQGAKE
CHCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDRCVPGTFQFGPNGCRACACDPQGSQSLF
CDQLTGQCVCVLGAYGRQCDRCLPGHWGFPSCRPCSCNGHTEDCNPDTGSCINCRDHSTG
HTCDRCLDGYYGDPVLGSGDHCHPCMCPDGPASLRQFAGSCYDGNSQHTICACNTGYRGS
RCDECSPGYYGNPGEAGGQCQQCQCNNNIDVLDPESCDGRTGECLRCLHHSEGAGCQSCK
QGYYGNALLQDCRKCVCDQLGSDSSGCPSPGSCPCERSSGRCRCLPNVTGQHCDRCAVDT
WNLASGHGCQSCGCASAHSYGTSCNEVSGQCSCQPGFGGRTCSECRELFWGDPAVQCHAC
DCDPRGVSEPQCNKASGHCVCVDGVSGPRCDVCSRGFSGTFPDCHRCHQCFSEWDSIIGQ
LTNQTHRLVNKVNAVKASGGSGPYKKSIESMERSVADVWVLLNQNPASQPLTETQELLQQ
ASDLMGALSRMLNHTEQTLVQVEDEDSAAETKLESVTSDAQKLERTVQELQDQVEFIKNS
DIKGATDSVSKYLEKSLAAEVRANASTIDPGSAVETSSALRQLTVDKLNQTREEFLRRHT
EHAQRLDDLAGELQTLDLSEISHKTCGSPSSGQHSCWSSPCGGLGCVDSEDWTWCGGDGC
DGVKTAASSIWRKTRDSEQEIISAMEEVEKLSKMVSEAKEKADEAKLSAQDVLMKTNRTK
QKVQQSNEELRGLIRQIRDFLTQDAADLESIELVANEVLAMQMPTTPAQLQNLTDDIRQK
VGELGNVESILQQSAADIQRAENLLDQARRASEEAAGVKDSAVKVKRALEEAERAQTAAN
SAIQQAAADIQTTNQLVSTVQLETAQAELKLTNATQRLQRLEQDVTLLRDKDLNVTVSTE
RTNQDAASIRKVAEEVKKDLDSEVKKKYAKVEQLIAQKAGGVANAKKRAESLQLEAKELL
LKASDKLQLLKDLEKSHEDNQRTLEVKAEQLVDLEVAVKELLQEISHKVTIYSTCLF
NT seq 5394 nt   +upstreamnt  +downstreamnt
atgtgggagcttcagctttcggtgctgctcgtcctgcaggtattcatctacgctcaggat
gggggggcctcaggaaaaagcgctcaggatgatgtcagccttccagggttcagtgacgtg
tgcacagagggcagctgttacccagcaacaggagaccttctgattggcagagcccaccaa
ctgtcatccacttccacctgtggaaggaatcgacccgaaccattctgcatcgtcagccac
ctgcaggaggagaagaagtgtttcatgtgtgactcttcttcgccgtatgacgtgctgagg
agtccgaccagcggccatcgcatcgagaacgttgtcaccacgtttgctcccaacagactg
aagacctggtggcagtctgagaacggtctggagaacgtcactctacagctgaacctggag
gccgagtttcatttcacacatctcattatgaccttcaagacgtttcgacctgctgccatg
gtgatcgagcgctcagctgacttcgggaaaacgtggcagctttatcgttacttcgcctac
gactgtgagacctccttcccctctgtttcccagggaccaatgcagaaagtcgatgacgtc
atctgtgactcgcgttactccgacatcgagccgtccactgaaggagaggtaattttcaga
gttctggacccagcgttcaggatcgatgatccctacagccccagaatccagaacatgttg
aagatcaccaacctacgggtgaagttcactagactgcacacgctcggcgataacttgctg
gactctcgtatggagattaaagagaagtattattacgccatctttgacatggtggtccga
ggaaactgcttctgctatggacatgcctctgagtgtgccccgatccaagaagccggccat
agcagtgagggcatggttcacggtcattgcatgtgtaaccacaacactaaaggtctgaac
tgtgaaaagtgtcaggatttctaccacgacttgccgtggagaccagccgagggacgcgac
actaacgcctgcaagaagtgtaactgtaaccagcactcctcctcgtgtcacttcgacata
gccgtgttcgtggcttcaggaaacatcagcggaggagtatgtgatggctgtcagcacaac
acggccggacacaactgtgagcagtgtcagccgttctactaccaacatccagagagggat
gtcagagaccccaacgtctgtcaatcctgtgactgcgacgctcagggctcgctgagcgga
ggaacctgtgactggacgacggacgtgcgagccggtctgattgccggtcagtgtcgctgt
aaagacaacgtggaaggggagcgatgcgggcgctgcaagccggcgcactacgggatgggc
gacgagccggaaggctgcaaggcgtgtagctgcagttccgtgggaacacttcctggagga
aatccctgcgacagtgaaacaggaagctgtttctgtaaacgtctggtgacgggacaagac
tgtgaccagtgtgtgtctgaacactggggtctcagtaatgatatggatggctgcagacca
tgtgactgtgaccttggaggagccatcaacaaccagtgtgatcaggtgagtggacagtgt
gtctgcagagatcacatgttcgatcgacgctgcgatcaggtcgagtctggattctacttc
atcgctctggatcactacacctatgaggcagaggacgccaagtttggacctggagtgata
gtggtcccaagaccccatcctctggatcgcagtcccacatggacaggtattggcctggtc
aatataccagagggggccttcctggagttctctgtggacaacattccccactccatggaa
tacgacatcctcatccgctacgagcctcagctgcctgaccaatgggaggaggttctgatg
acggtgatgaggccaggaccaatcagagcagacagtcgctgtgtcaacaccgtgccagac
gacgaccaccagatgatctctctccatcccggctcacgatatgtggctcttcccagaccc
gtttgttttgaatcgggtctgaactacacagtccgcctcagtctggctctgtactcagcc
ctcagtgacgtcctgtctccttatacactcattgactcgatcgtgttgatgcctcactgt
aagaacctggagatattctcagattcagtaggagactccagtgtgaacagtggttgggaa
acttttcagcgttatcgttgtctggagaacagccagagcataatcaagtcgccgatgacc
gacatctgcaggaacttcatcttcagcatctcagccatgttgcaccagggagctaaagaa
tgccactgtgatcctcagggctcccttagcaccgtgtgtgatcccagtgggggtcagtgt
cagtgtcgccccaacgtggtcggcaggaactgtgaccgatgtgttccgggcacattccag
ttcggacccaacggctgcagagcatgtgcctgtgaccctcagggttcacagagtttgttc
tgcgaccagctgactggtcagtgtgtttgtgttttgggagcgtacggtcggcagtgtgat
cgctgtctgccggggcactggggcttcccctcctgccgaccttgctcctgcaacggacac
accgaagactgcaaccccgacaccggaagctgcatcaactgccgggaccacagcactggg
cacacctgtgacaggtgtctggatggttactatggggacccggtgttggggtcaggtgac
cactgccatccctgcatgtgtcccgatggccccgccagcctgcggcagttcgcaggaagt
tgttatgacggtaactcccagcataccatctgcgcctgcaacaccggatacagaggttct
cgctgtgacgagtgctcacctggttactatggaaaccccggggaggcgggggggcagtgc
cagcaatgtcagtgcaacaacaacatcgacgtgttggacccggagtcctgcgatggccga
accggcgagtgtctgcgttgccttcaccacagtgagggtgccggctgccagagctgcaag
cagggctactacggcaacgcactgctgcaggactgcaggaagtgtgtttgtgaccaactg
ggcagcgactcctctggctgtccgtcacccggcagctgtccctgcgagcgtagcagcggt
cggtgtcgctgcctacccaacgtcaccgggcagcactgcgaccgctgtgcagtagacacc
tggaacctggcgagcggacacggctgccagagctgcggctgcgcctccgcacactcgtac
gggacgtcctgcaatgaggtcagcggccagtgttcctgtcagcccggctttggaggaaga
acatgcagcgagtgtagagagctgttctggggagacccagcggtccaatgtcacgcgtgc
gactgtgatcctcgcggtgtctccgagccgcagtgtaacaaagccagcggtcactgcgtt
tgtgtggacggggtttctggtccacgctgcgatgtatgcagccgcggcttctctggaacc
ttccccgactgccaccgctgccatcagtgcttcagcgagtgggacagcatcatcggtcag
ctgaccaatcagacgcaccgtctcgtcaacaaggtcaacgccgtgaaagccagcggaggc
agcggaccatacaagaagtccatcgagagcatggagaggagtgtcgccgacgtctgggtc
ctcctgaaccagaacccggcctctcaaccactgactgagacccaggagctgctgcaacaa
gccagtgacctgatgggggccctgagccggatgttgaaccacactgaacagactctggtc
caggtggaggacgaagactcggctgcagaaactaaactggaatctgtgacgtcggatgca
cagaaactggagcggacagttcaagagttgcaggatcaggttgagttcatcaagaactct
gacatcaaaggggccacagacagcgtctcaaagtacttagagaagtctctggcagctgaa
gtccgagcgaacgcctccaccattgatcccggcagcgcggtggaaacctccagcgctcta
cggcaactcacagtggacaaactgaaccaaaccagagaggaattcctgaggagacacact
gagcatgctcagagactggacgacctggccggagagctgcagactctggacctctcggag
atcagccacaagacttgcggcagtccatcatcaggtcagcactcatgctggtcctctccc
tgtggaggtctgggatgtgtggactctgaggattggacctggtgtggaggtgatgggtgt
gacggcgtgaagacggcggccagcagtatctggaggaagacccgagactctgagcaggag
atcatcagtgccatggaggaagtggagaaactctccaagatggtgtcggaggccaaggag
aaagcggacgaggcaaagctgagtgctcaggacgtcctgatgaagactaacaggaccaaa
cagaaagtccagcagagcaacgaggagctgagaggcctcatcaggcagatccgggacttc
ctcacacaggacgctgcagacctggagagcatcgagttagtggctaacgaggttctggcc
atgcagatgccaactacgccggctcagctgcagaacctgaccgacgacatccggcagaag
gtgggagagttgggaaacgtggagagcatcctgcagcagagcgccgccgacattcagaga
gccgagaacctgttggaccaggcccgccgagccagtgaggaggcagcaggtgtgaaggac
tctgcagtgaaagtgaagcgcgctctagaggaagctgagagggctcagactgccgccaac
agtgccatccagcaggctgccgctgacatccaaaccaccaaccagctggtgtccacggtg
cagttggagacggcccaggcagagttgaagctgactaacgccacccaaaggctgcagagg
ctcgagcaggacgtgacgctgctgagagacaaagatctgaatgtcactgtgagcactgaa
cgcaccaatcaggacgcagcgagcatcagaaaggtggctgaggaagtgaagaaggatctg
gactcggaggtgaagaagaagtatgccaaagtggagcagctgattgctcagaaggcaggg
ggcgtggctaatgctaagaagagggcggagtcactgcagctagaagccaaagagctgctg
ctgaaggccagtgacaaactgcagctgctcaaagacctggagaagtctcacgaagacaac
cagcggactctggaggtgaaggcggagcagctggtggacctggaggtggccgtgaaggag
ctgcttcaggagatcagccacaaggtcaccatctactccacctgtctgttctag

DBGET integrated database retrieval system