Cyclopterus lumpus (lumpfish): 117732758
Help
Entry
117732758 CDS
T09199
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04620
Toll-like receptor signaling pathway
clum04621
NOD-like receptor signaling pathway
clum04622
RIG-I-like receptor signaling pathway
clum04623
Cytosolic DNA-sensing pathway
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117732758 (irf7)
04621 NOD-like receptor signaling pathway
117732758 (irf7)
04622 RIG-I-like receptor signaling pathway
117732758 (irf7)
04623 Cytosolic DNA-sensing pathway
117732758 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117732758 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117732758 (irf7)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117732758 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117732758
NCBI-ProteinID:
XP_034391806
Ensembl:
ENSCLMG00005022952
UniProt:
A0A8C3GCD7
LinkDB
All DBs
Position
6:16874835..16878466
Genome browser
AA seq
438 aa
AA seq
DB search
MESLNKPKFASWLIEQVETGQYTGLRYEGQNKFRVPWKHNSRKDCNDEDSKIFRAWAVTS
GKISEFPNDKARWKTNFRCALNNLSVRFKMIMDNSKNSDDPHKIYEMINTEYNYESRPTE
DSQEDSVMTQDIYSSPVECFPSGNELNLLNNFMALDLGNQTSEEQLWPEDYGQHDPTAPA
SYPVAAENQPQPLPDQPSYCEVNPPPVLSSPLQQPSIFDLEISIHYRRREMLKIPLTTSL
LQLHYQQEATELNGYHLCFPSTDSLLDRKQVEYTNRILNSIQRGLCLEVRDTGIYAWRQD
RCHVFASTSDPSVAHPDPRKLPQNTMVELLNFAKYAHELKQFKENNGSSPDYTINMCFGE
KFPDGNPLDKKLIVVKVVPLICRHFHEMAQMDGASSLHSANVSLQISHNSLYDLINSVFG
LPMDEEPARAAASFLPQS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccttaacaagccaaagtttgccagctggctcatagagcaggtggagacgggc
cagtacacgggcctccgctacgagggccaaaacaagttcagagtcccctggaagcacaac
tccagaaaggactgcaacgacgaagacagtaaaatatttcgggcatgggcagtaacaagt
ggaaaaatcagcgagttccccaacgacaaggccagatggaaaaccaacttccgctgcgca
ctgaacaacctctctgtgcgcttcaagatgataatggataattccaagaattcggacgac
cctcataagatctatgagatgatcaacactgagtacaactatgaaagtcggcccacagaa
gactcccaggaggattctgtcatgactcaagatatctacagctcccccgtagagtgcttc
ccctcaggaaacgagcttaatctacttaacaatttcatggccttggatcttggcaaccag
acgtcagaggagcagctgtggccagaggactacggtcagcacgacccaactgcccctgca
agctatcctgtagcagctgagaaccagccgcagcctttaccagatcagccttcttactgt
gaggtaaatcctccaccagtcctaagttcacctctgcagcagccaagtatatttgacctg
gagatctccatccactacaggagaagggaaatgctaaagatcccattgaccacttccctt
ctccagctccactaccagcaggaggccaccgagctcaatggctatcatctctgctttccc
tcaacagacagtctgctggaccgcaaacaggttgagtataccaaccgcatcctcaacagc
atccagaggggtctatgcctggaggtacgggacactggtatttatgcctggaggcaggac
aggtgccatgtgtttgccagtaccagtgatcccagtgtggctcacccagacccaagaaag
ctgccccagaacaccatggtggagctcctcaactttgctaagtatgcacatgaactgaag
cagtttaaagagaacaacggcagctctcccgattacaccatcaacatgtgctttggagag
aagtttcctgatggaaatcctttggacaagaagctcatcgtagtcaaggtggtccctttg
atctgtcgacactttcatgagatggcccagatggacggggcttcgtctcttcacagcgcc
aacgtcagcctccagatctcacacaacagcctctatgatcttattaactctgtctttggt
ctgccgatggatgaagagccagcacgggctgctgcatcttttctacctcagtcctga
DBGET
integrated database retrieval system