KEGG   Cyclopterus lumpus (lumpfish): 117732758
Entry
117732758         CDS       T09199                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04620  Toll-like receptor signaling pathway
clum04621  NOD-like receptor signaling pathway
clum04622  RIG-I-like receptor signaling pathway
clum04623  Cytosolic DNA-sensing pathway
clum05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117732758 (irf7)
   04621 NOD-like receptor signaling pathway
    117732758 (irf7)
   04622 RIG-I-like receptor signaling pathway
    117732758 (irf7)
   04623 Cytosolic DNA-sensing pathway
    117732758 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117732758 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clum03000]
    117732758 (irf7)
Transcription factors [BR:clum03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    117732758 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 117732758
NCBI-ProteinID: XP_034391806
Ensembl: ENSCLMG00005022952
UniProt: A0A8C3GCD7
LinkDB
Position
6:16874835..16878466
AA seq 438 aa
MESLNKPKFASWLIEQVETGQYTGLRYEGQNKFRVPWKHNSRKDCNDEDSKIFRAWAVTS
GKISEFPNDKARWKTNFRCALNNLSVRFKMIMDNSKNSDDPHKIYEMINTEYNYESRPTE
DSQEDSVMTQDIYSSPVECFPSGNELNLLNNFMALDLGNQTSEEQLWPEDYGQHDPTAPA
SYPVAAENQPQPLPDQPSYCEVNPPPVLSSPLQQPSIFDLEISIHYRRREMLKIPLTTSL
LQLHYQQEATELNGYHLCFPSTDSLLDRKQVEYTNRILNSIQRGLCLEVRDTGIYAWRQD
RCHVFASTSDPSVAHPDPRKLPQNTMVELLNFAKYAHELKQFKENNGSSPDYTINMCFGE
KFPDGNPLDKKLIVVKVVPLICRHFHEMAQMDGASSLHSANVSLQISHNSLYDLINSVFG
LPMDEEPARAAASFLPQS
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggaaagccttaacaagccaaagtttgccagctggctcatagagcaggtggagacgggc
cagtacacgggcctccgctacgagggccaaaacaagttcagagtcccctggaagcacaac
tccagaaaggactgcaacgacgaagacagtaaaatatttcgggcatgggcagtaacaagt
ggaaaaatcagcgagttccccaacgacaaggccagatggaaaaccaacttccgctgcgca
ctgaacaacctctctgtgcgcttcaagatgataatggataattccaagaattcggacgac
cctcataagatctatgagatgatcaacactgagtacaactatgaaagtcggcccacagaa
gactcccaggaggattctgtcatgactcaagatatctacagctcccccgtagagtgcttc
ccctcaggaaacgagcttaatctacttaacaatttcatggccttggatcttggcaaccag
acgtcagaggagcagctgtggccagaggactacggtcagcacgacccaactgcccctgca
agctatcctgtagcagctgagaaccagccgcagcctttaccagatcagccttcttactgt
gaggtaaatcctccaccagtcctaagttcacctctgcagcagccaagtatatttgacctg
gagatctccatccactacaggagaagggaaatgctaaagatcccattgaccacttccctt
ctccagctccactaccagcaggaggccaccgagctcaatggctatcatctctgctttccc
tcaacagacagtctgctggaccgcaaacaggttgagtataccaaccgcatcctcaacagc
atccagaggggtctatgcctggaggtacgggacactggtatttatgcctggaggcaggac
aggtgccatgtgtttgccagtaccagtgatcccagtgtggctcacccagacccaagaaag
ctgccccagaacaccatggtggagctcctcaactttgctaagtatgcacatgaactgaag
cagtttaaagagaacaacggcagctctcccgattacaccatcaacatgtgctttggagag
aagtttcctgatggaaatcctttggacaagaagctcatcgtagtcaaggtggtccctttg
atctgtcgacactttcatgagatggcccagatggacggggcttcgtctcttcacagcgcc
aacgtcagcctccagatctcacacaacagcctctatgatcttattaactctgtctttggt
ctgccgatggatgaagagccagcacgggctgctgcatcttttctacctcagtcctga

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